RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RD3LP0DJH9 198 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 NPPCP23582 126 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 DLK1P80370 383 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 ZNF90Q03938 601 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 GSG1LQ6UXU4 331 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 TCF24Q7RTU0 167 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 DEFB125Q8N687 156 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 OR51G1Q8NGK1 321 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 RNF125Q96EQ8 232 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 PAIP2BQ9ULR5 123 aaKnown RBP10.56□□□□□ -0.72
HDAC4-205ENST00000454542 A0A1W2PS18 150 aa10.55□□□□□ -0.72
HDAC4-205ENST00000454542 C5orf51A6NDU8 294 aa10.55□□□□□ -0.72
HDAC4-205ENST00000454542 FAM25EA8MYX2 175 aa10.55□□□□□ -0.72
HDAC4-205ENST00000454542 PTTG1O95997 202 aa10.55□□□□□ -0.72
HDAC4-205ENST00000454542 P2RY1P47900 373 aa10.55□□□□□ -0.72
HDAC4-205ENST00000454542 OR8G2PQ6IF36 304 aa10.55□□□□□ -0.72
HDAC4-205ENST00000454542 C16orf54Q6UWD8 224 aa10.55□□□□□ -0.72
HDAC4-205ENST00000454542 TMEM144Q7Z5S9 345 aa10.55□□□□□ -0.72
HDAC4-205ENST00000454542 GLMPQ8WWB7 406 aa10.55□□□□□ -0.72
HDAC4-205ENST00000454542 ASCL2Q99929 193 aa10.55□□□□□ -0.72
HDAC4-205ENST00000454542 SRD5A3Q9H8P0 318 aa10.55□□□□□ -0.72
HDAC4-205ENST00000454542 IGHV3-66A0A0C4DH42 116 aa10.54□□□□□ -0.72
HDAC4-205ENST00000454542 RBMY1BA6NDE4 496 aaKnown RBP10.54□□□□□ -0.72
HDAC4-205ENST00000454542 RBMY1EA6NEQ0 496 aaKnown RBP10.54□□□□□ -0.72
HDAC4-205ENST00000454542 DFFBO76075 338 aa10.54□□□□□ -0.72
HDAC4-205ENST00000454542 FABP1P07148 127 aa10.54□□□□□ -0.72
HDAC4-205ENST00000454542 RBMY1DP0C7P1 496 aaKnown RBP10.54□□□□□ -0.72
HDAC4-205ENST00000454542 METTL15P1P0C7V9 234 aa10.54□□□□□ -0.72
HDAC4-205ENST00000454542 ARL16Q0P5N6 197 aa10.54□□□□□ -0.72
HDAC4-205ENST00000454542 CITED4Q96RK1 184 aa10.54□□□□□ -0.72
HDAC4-205ENST00000454542 LSM5Q9Y4Y9 91 aaKnown RBP10.54□□□□□ -0.72
HDAC4-205ENST00000454542 GOSR2O14653 212 aa10.53□□□□□ -0.72
HDAC4-205ENST00000454542 BUB3O43684 328 aa10.53□□□□□ -0.72
HDAC4-205ENST00000454542 NUP62P37198 522 aaPredicted RBP10.53□□□□□ -0.72
HDAC4-205ENST00000454542 EIF2B2P49770 351 aaKnown RBP10.53□□□□□ -0.72
HDAC4-205ENST00000454542 AKR1C1Q04828 323 aa10.53□□□□□ -0.72
HDAC4-205ENST00000454542 RAB32Q13637 225 aa10.53□□□□□ -0.72
HDAC4-205ENST00000454542 HAGHQ16775 308 aa10.53□□□□□ -0.72
HDAC4-205ENST00000454542 STPG3Q8N7X2 389 aa10.53□□□□□ -0.72
HDAC4-205ENST00000454542 NARS2Q96I59 477 aaKnown RBP10.53□□□□□ -0.72
HDAC4-205ENST00000454542 GGACTQ9BVM4 153 aa10.53□□□□□ -0.72
HDAC4-205ENST00000454542 NMES1Q9C002 83 aa10.53□□□□□ -0.72
HDAC4-205ENST00000454542 MS4A6AQ9H2W1 248 aa10.53□□□□□ -0.72
HDAC4-205ENST00000454542 TUBA4BQ9H853 241 aa10.53□□□□□ -0.72
HDAC4-205ENST00000454542 RABAC1Q9UI14 185 aa10.53□□□□□ -0.72
HDAC4-205ENST00000454542 U3KQK5 164 aa10.53□□□□□ -0.72
HDAC4-205ENST00000454542 TENM3Q9P273 2699 aa10.52□□□□□ -0.72
HDAC4-205ENST00000454542 STAB2Q8WWQ8 2551 aa10.52□□□□□ -0.73
HDAC4-205ENST00000454542 CFDP00746 253 aaPredicted RBP10.52□□□□□ -0.73
HDAC4-205ENST00000454542 OR10P1Q8NGE3 313 aa10.52□□□□□ -0.73
HDAC4-205ENST00000454542 DCANP1Q8TF63 244 aa10.52□□□□□ -0.73
HDAC4-205ENST00000454542 GRAMD2BQ96HH9 432 aa10.52□□□□□ -0.73
HDAC4-205ENST00000454542 MAP6D1Q9H9H5 199 aa10.52□□□□□ -0.73
HDAC4-205ENST00000454542 LYRM2Q9NU23 88 aaPredicted RBP10.52□□□□□ -0.73
HDAC4-205ENST00000454542 UBQLN2Q9UHD9 624 aa10.52□□□□□ -0.73
HDAC4-205ENST00000454542 SLC45A2Q9UMX9 530 aa10.52□□□□□ -0.73
HDAC4-205ENST00000454542 K7EQG2 157 aa10.51□□□□□ -0.73
HDAC4-205ENST00000454542 L7N2F9 121 aa10.51□□□□□ -0.73
HDAC4-205ENST00000454542 DEDDO75618 318 aa10.51□□□□□ -0.73
HDAC4-205ENST00000454542 H2BFSP57053 126 aa10.51□□□□□ -0.73
HDAC4-205ENST00000454542 S100A10P60903 97 aa10.51□□□□□ -0.73
HDAC4-205ENST00000454542 LYZP61626 148 aa10.51□□□□□ -0.73
HDAC4-205ENST00000454542 VAMP2P63027 116 aa10.51□□□□□ -0.73
HDAC4-205ENST00000454542 TMEM182Q6ZP80 229 aaPredicted RBP10.51□□□□□ -0.73
HDAC4-205ENST00000454542 FAM24BQ8N5W8 94 aa10.51□□□□□ -0.73
HDAC4-205ENST00000454542 IGKV3-7A0A075B6H7 116 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 IGSF23A1L1A6 192 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 HELTA6NFD8 242 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 SIX6O95475 246 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 PVALBP20472 110 aaPredicted RBP10.5□□□□□ -0.73
HDAC4-205ENST00000454542 PLP1P60201 277 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 RRAS2P62070 204 aaPredicted RBP10.5□□□□□ -0.73
HDAC4-205ENST00000454542 PAFAH1B2P68402 229 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 OR2F1Q13607 317 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 VWC2Q2TAL6 325 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 CYP2G1PQ6ZSU1 146 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 BPIFCQ8NFQ6 507 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 RCHY1Q96PM5 261 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 SPATA25Q9BR10 227 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 PBDC1Q9BVG4 233 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 GGTLC1Q9BX51 225 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 NPVFQ9HCQ7 196 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 MGAT4CQ9UBM8 478 aa10.5□□□□□ -0.73
HDAC4-205ENST00000454542 SMCO3A2RU48 225 aa10.49□□□□□ -0.73
HDAC4-205ENST00000454542 FAM24AA6NFZ4 105 aa10.49□□□□□ -0.73
HDAC4-205ENST00000454542 TFPI2P48307 235 aa10.49□□□□□ -0.73
HDAC4-205ENST00000454542 CAV2P51636 162 aa10.49□□□□□ -0.73
HDAC4-205ENST00000454542 CMC4P56277 68 aaPredicted RBP10.49□□□□□ -0.73
HDAC4-205ENST00000454542 SELENOTP62341 195 aa10.49□□□□□ -0.73
HDAC4-205ENST00000454542 SLC38A11Q08AI6 406 aa10.49□□□□□ -0.73
HDAC4-205ENST00000454542 C1orf194Q5T5A4 169 aa10.49□□□□□ -0.73
HDAC4-205ENST00000454542 SIGLEC15Q6ZMC9 328 aa10.49□□□□□ -0.73
HDAC4-205ENST00000454542 GBGT1Q8N5D6 347 aa10.49□□□□□ -0.73
HDAC4-205ENST00000454542 TMEM252Q8N6L7 170 aa10.49□□□□□ -0.73
HDAC4-205ENST00000454542 ZMAT4Q9H898 229 aa10.49□□□□□ -0.73
HDAC4-205ENST00000454542 ALG5Q9Y673 324 aa10.49□□□□□ -0.73
HDAC4-205ENST00000454542 LOC102724200A0A096LPH7 203 aaPredicted RBP10.48□□□□□ -0.73
HDAC4-205ENST00000454542 H0YIZ8 118 aa10.48□□□□□ -0.73
HDAC4-205ENST00000454542 GATA2P23769 480 aaPredicted RBP10.48□□□□□ -0.73
HDAC4-205ENST00000454542 SULT1A1P50225 295 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms