RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 LHFPL4Q7Z7J7 247 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 HSPB9Q9BQS6 159 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 CREBBPQ92793 2442 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 CCDC168Q8NDH2 2452 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 FNDC10F2Z333 226 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 SMAD7O15105 426 aaKnown RBP12.7□□□□□ -0.38
SNX17-204ENST00000453453 SAA4P35542 130 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 ZNF114Q8NC26 417 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 OR5T1Q8NG75 326 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 OR4C13Q8NGP0 309 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 OSR1Q8TAX0 266 aaPredicted RBP12.7□□□□□ -0.38
SNX17-204ENST00000453453 FLYWCH2Q96CP2 140 aaKnown RBP12.7□□□□□ -0.38
SNX17-204ENST00000453453 AURKAIP1Q9NWT8 199 aaPredicted RBP12.7□□□□□ -0.38
SNX17-204ENST00000453453 SLC45A2Q9UMX9 530 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 ZFP30Q9Y2G7 519 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 SERF1AO75920 110 aa12.69□□□□□ -0.38
SNX17-204ENST00000453453 ARL14EPLP0DKL9 152 aa12.69□□□□□ -0.38
SNX17-204ENST00000453453 OR1L6Q8NGR2 347 aa12.69□□□□□ -0.38
SNX17-204ENST00000453453 CSMD2Q7Z408 3487 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 TRBV20OR9-2A0A075B6H5 130 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 A0A1W2PPI3 338 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 COMPP49747 757 aaPredicted RBP12.68□□□□□ -0.38
SNX17-204ENST00000453453 UBE2G2P60604 165 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 RHOBP62745 196 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 TMEM177Q53S58 311 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 ARSJQ5FYB0 599 aaPredicted RBP12.68□□□□□ -0.38
SNX17-204ENST00000453453 BAGE3Q86Y29 109 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 BAGE2Q86Y30 109 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 SIGLECL1Q8N7X8 197 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 OCC1Q8TAD7 63 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 ZDHHC16Q969W1 377 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 HARBI1Q96MB7 349 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 DERL1Q9BUN8 251 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 GGTLC1Q9BX51 225 aa12.68□□□□□ -0.38
SNX17-204ENST00000453453 IGHV3OR16-10A0A075B7F0 116 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 IGHV3-72A0A0B4J1Y9 119 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 PRSS46E5RG02 174 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 TIMM23O14925 209 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 IGKV1-16P04430 117 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 OR5G3P0C626 314 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 GCHFRP30047 84 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 CTRLP40313 264 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 BPIFB3P59826 476 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 RPS16P62249 146 aaKnown RBP12.67□□□□□ -0.38
SNX17-204ENST00000453453 LDLRAD2Q5SZI1 272 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 TEX29Q8N6K0 151 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 SAMD10Q9BYL1 202 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 UQCR10Q9UDW1 63 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 MAP1AP78559 2803 aaPredicted RBP12.67□□□□□ -0.38
SNX17-204ENST00000453453 ITPR3Q14573 2671 aa12.67□□□□□ -0.38
SNX17-204ENST00000453453 SCO2A0A1W2PP80 73 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 RBMXL2O75526 392 aaKnown RBP12.66□□□□□ -0.38
SNX17-204ENST00000453453 CBLN1P23435 193 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 TREML4Q6UXN2 200 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 CIARTQ8N365 385 aaPredicted RBP12.66□□□□□ -0.38
SNX17-204ENST00000453453 EAF1Q96JC9 268 aaPredicted RBP12.66□□□□□ -0.38
SNX17-204ENST00000453453 OSTCQ9NRP0 149 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 A0A1B0GUS0 222 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 C20orf202A1L168 122 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 GPX1P07203 203 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 NPSP0C0P6 89 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 IGHV4-38-2P0DP08 117 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 VDAC2P45880 294 aaPredicted RBP12.66□□□□□ -0.38
SNX17-204ENST00000453453 LGALS7P47929 136 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 POU2AF1Q16633 256 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 VMA21Q3ZAQ7 101 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 RUSC1-AS1Q66K80 236 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 BRD3OSQ6XYD6 125 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 C19orf35Q6ZS72 473 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 PIP4P2Q8N4L2 257 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 KLHDC1Q8N7A1 406 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 VSTM2AQ8TAG5 236 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 KCNS1Q96KK3 526 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 MGST2Q99735 147 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 RNF5Q99942 180 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 TMEM140Q9NV12 185 aa12.66□□□□□ -0.38
SNX17-204ENST00000453453 LSM4Q9Y4Z0 139 aaKnown RBP12.66□□□□□ -0.38
SNX17-204ENST00000453453 ASH1LQ9NR48 2969 aaKnown RBP12.65□□□□□ -0.38
SNX17-204ENST00000453453 GRIFINA4D1Z8 144 aa12.65□□□□□ -0.38
SNX17-204ENST00000453453 FCN1O00602 326 aa12.65□□□□□ -0.38
SNX17-204ENST00000453453 RAB31Q13636 194 aa12.65□□□□□ -0.38
SNX17-204ENST00000453453 RASL11AQ6T310 242 aa12.65□□□□□ -0.38
SNX17-204ENST00000453453 MMD2Q8IY49 270 aa12.65□□□□□ -0.38
SNX17-204ENST00000453453 OR4A16Q8NH70 328 aa12.65□□□□□ -0.38
SNX17-204ENST00000453453 ORAOV1Q8WV07 137 aa12.65□□□□□ -0.38
SNX17-204ENST00000453453 CFHR4Q92496 578 aa12.65□□□□□ -0.38
SNX17-204ENST00000453453 NPVFQ9HCQ7 196 aa12.65□□□□□ -0.38
SNX17-204ENST00000453453 TMEM167BQ9NRX6 74 aa12.65□□□□□ -0.38
SNX17-204ENST00000453453 PAM16Q9Y3D7 125 aa12.65□□□□□ -0.38
SNX17-204ENST00000453453 SNURFLB1AK76 121 aa12.64□□□□□ -0.39
SNX17-204ENST00000453453 ZNF253O75346 499 aa12.64□□□□□ -0.39
SNX17-204ENST00000453453 AVPP01185 164 aa12.64□□□□□ -0.39
SNX17-204ENST00000453453 HLA-DQA1P01909 254 aa12.64□□□□□ -0.39
SNX17-204ENST00000453453 SUMO1P63165 101 aaKnown RBP12.64□□□□□ -0.39
SNX17-204ENST00000453453 CX3CL1P78423 397 aa12.64□□□□□ -0.39
SNX17-204ENST00000453453 HES1Q14469 280 aa12.64□□□□□ -0.39
SNX17-204ENST00000453453 OR4A47Q6IF82 309 aa12.64□□□□□ -0.39
SNX17-204ENST00000453453 VKORC1L1Q8N0U8 176 aa12.64□□□□□ -0.39
SNX17-204ENST00000453453 DYNAPQ8N1N2 210 aa12.64□□□□□ -0.39
SNX17-204ENST00000453453 Q8N976 141 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 279 ms