RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 VAMP2P63027 116 aa14.93□□□□□ -0.02
COL9A3-202ENST00000452372 FAM90A2PQ658T7 463 aa14.93□□□□□ -0.02
COL9A3-202ENST00000452372 LILRB2Q8N423 598 aa14.93□□□□□ -0.02
COL9A3-202ENST00000452372 C11orf1Q9H5F2 150 aa14.93□□□□□ -0.02
COL9A3-202ENST00000452372 TMEM231Q9H6L2 316 aa14.93□□□□□ -0.02
COL9A3-202ENST00000452372 C19orf73Q9NVV2 129 aa14.93□□□□□ -0.02
COL9A3-202ENST00000452372 GOSR2O14653 212 aa14.92□□□□□ -0.02
COL9A3-202ENST00000452372 CCNKO75909 580 aa14.92□□□□□ -0.02
COL9A3-202ENST00000452372 FABP1P07148 127 aa14.92□□□□□ -0.02
COL9A3-202ENST00000452372 FRMD6-AS1P0C7T7 363 aa14.92□□□□□ -0.02
COL9A3-202ENST00000452372 ZNF90Q03938 601 aa14.92□□□□□ -0.02
COL9A3-202ENST00000452372 RAB32Q13637 225 aa14.92□□□□□ -0.02
COL9A3-202ENST00000452372 ACOT7LQ6ZUV0 252 aa14.92□□□□□ -0.02
COL9A3-202ENST00000452372 OR51G1Q8NGK1 321 aa14.92□□□□□ -0.02
COL9A3-202ENST00000452372 U3KQE9 123 aa14.92□□□□□ -0.02
COL9A3-202ENST00000452372 SIX6O95475 246 aa14.91□□□□□ -0.02
COL9A3-202ENST00000452372 PVALBP20472 110 aaPredicted RBP14.91□□□□□ -0.02
COL9A3-202ENST00000452372 DLK1P80370 383 aa14.91□□□□□ -0.02
COL9A3-202ENST00000452372 USF2Q15853 346 aaPredicted RBP14.91□□□□□ -0.02
COL9A3-202ENST00000452372 TCF24Q7RTU0 167 aa14.91□□□□□ -0.02
COL9A3-202ENST00000452372 TMEM144Q7Z5S9 345 aa14.91□□□□□ -0.02
COL9A3-202ENST00000452372 OR10P1Q8NGE3 313 aa14.91□□□□□ -0.02
COL9A3-202ENST00000452372 NARS2Q96I59 477 aaKnown RBP14.91□□□□□ -0.02
COL9A3-202ENST00000452372 NMES1Q9C002 83 aa14.91□□□□□ -0.02
COL9A3-202ENST00000452372 IGHV3-66A0A0C4DH42 116 aa14.9□□□□□ -0.02
COL9A3-202ENST00000452372 OR4C46A6NHA9 309 aa14.9□□□□□ -0.02
COL9A3-202ENST00000452372 OR11H12B2RN74 326 aa14.9□□□□□ -0.02
COL9A3-202ENST00000452372 FNDC10F2Z333 226 aa14.9□□□□□ -0.02
COL9A3-202ENST00000452372 SSNA1O43805 119 aa14.9□□□□□ -0.02
COL9A3-202ENST00000452372 DFFBO76075 338 aa14.9□□□□□ -0.02
COL9A3-202ENST00000452372 HNRNPCP07910 306 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL9A3-202ENST00000452372 S100A10P60903 97 aa14.9□□□□□ -0.02
COL9A3-202ENST00000452372 CYCSP99999 105 aaKnown RBP14.9□□□□□ -0.02
COL9A3-202ENST00000452372 AKR1C1Q04828 323 aa14.9□□□□□ -0.02
COL9A3-202ENST00000452372 RNF125Q96EQ8 232 aa14.9□□□□□ -0.02
COL9A3-202ENST00000452372 TUBA4BQ9H853 241 aa14.9□□□□□ -0.02
COL9A3-202ENST00000452372 BCAP31P51572 246 aa14.89□□□□□ -0.03
COL9A3-202ENST00000452372 SBSPONQ8IVN8 264 aa14.89□□□□□ -0.03
COL9A3-202ENST00000452372 DEFB125Q8N687 156 aa14.89□□□□□ -0.03
COL9A3-202ENST00000452372 GRAMD2BQ96HH9 432 aa14.89□□□□□ -0.03
COL9A3-202ENST00000452372 RABAC1Q9UI14 185 aa14.89□□□□□ -0.03
COL9A3-202ENST00000452372 SMCO3A2RU48 225 aa14.88□□□□□ -0.03
COL9A3-202ENST00000452372 DEDDO75618 318 aa14.88□□□□□ -0.03
COL9A3-202ENST00000452372 CFDP00746 253 aaPredicted RBP14.88□□□□□ -0.03
COL9A3-202ENST00000452372 P2RY1P47900 373 aa14.88□□□□□ -0.03
COL9A3-202ENST00000452372 CAV2P51636 162 aa14.88□□□□□ -0.03
COL9A3-202ENST00000452372 RRAS2P62070 204 aaPredicted RBP14.88□□□□□ -0.03
COL9A3-202ENST00000452372 PAFAH1B2P68402 229 aa14.88□□□□□ -0.03
COL9A3-202ENST00000452372 ARL16Q0P5N6 197 aa14.88□□□□□ -0.03
COL9A3-202ENST00000452372 OR2F1Q13607 317 aa14.88□□□□□ -0.03
COL9A3-202ENST00000452372 GGACTQ9BVM4 153 aa14.88□□□□□ -0.03
COL9A3-202ENST00000452372 WFDC10AQ9H1F0 79 aa14.88□□□□□ -0.03
COL9A3-202ENST00000452372 NPVFQ9HCQ7 196 aa14.88□□□□□ -0.03
COL9A3-202ENST00000452372 LYRM2Q9NU23 88 aaPredicted RBP14.88□□□□□ -0.03
COL9A3-202ENST00000452372 IGKV3-7A0A075B6H7 116 aa14.87□□□□□ -0.03
COL9A3-202ENST00000452372 FAM24AA6NFZ4 105 aa14.87□□□□□ -0.03
COL9A3-202ENST00000452372 H2BFSP57053 126 aa14.87□□□□□ -0.03
COL9A3-202ENST00000452372 C16orf54Q6UWD8 224 aa14.87□□□□□ -0.03
COL9A3-202ENST00000452372 PBDC1Q9BVG4 233 aa14.87□□□□□ -0.03
COL9A3-202ENST00000452372 MGAT4CQ9UBM8 478 aa14.87□□□□□ -0.03
COL9A3-202ENST00000452372 ALG5Q9Y673 324 aa14.87□□□□□ -0.03
COL9A3-202ENST00000452372 BUB3O43684 328 aa14.86□□□□□ -0.03
COL9A3-202ENST00000452372 EIF2B2P49770 351 aaKnown RBP14.86□□□□□ -0.03
COL9A3-202ENST00000452372 LINC00322Q6ZN03 302 aaPredicted RBP14.86□□□□□ -0.03
COL9A3-202ENST00000452372 GBGT1Q8N5D6 347 aa14.86□□□□□ -0.03
COL9A3-202ENST00000452372 FAM110AQ9BQ89 295 aa14.86□□□□□ -0.03
COL9A3-202ENST00000452372 MS4A6AQ9H2W1 248 aa14.86□□□□□ -0.03
COL9A3-202ENST00000452372 PFDN2Q9UHV9 154 aa14.86□□□□□ -0.03
COL9A3-202ENST00000452372 RLN2P04090 185 aa14.85□□□□□ -0.03
COL9A3-202ENST00000452372 TFPI2P48307 235 aa14.85□□□□□ -0.03
COL9A3-202ENST00000452372 LYZP61626 148 aa14.85□□□□□ -0.03
COL9A3-202ENST00000452372 RPL11P62913 178 aaKnown RBP14.85□□□□□ -0.03
COL9A3-202ENST00000452372 ODF3L2Q3SX64 289 aa14.85□□□□□ -0.03
COL9A3-202ENST00000452372 TMEM182Q6ZP80 229 aaPredicted RBP14.85□□□□□ -0.03
COL9A3-202ENST00000452372 BPIFCQ8NFQ6 507 aa14.85□□□□□ -0.03
COL9A3-202ENST00000452372 GLMPQ8WWB7 406 aa14.85□□□□□ -0.03
COL9A3-202ENST00000452372 SRD5A3Q9H8P0 318 aa14.85□□□□□ -0.03
COL9A3-202ENST00000452372 TENM2Q9NT68 2774 aa14.85□□□□□ -0.03
COL9A3-202ENST00000452372 TRAV2A0A0B4J234 112 aa14.84□□□□□ -0.03
COL9A3-202ENST00000452372 HELTA6NFD8 242 aa14.84□□□□□ -0.03
COL9A3-202ENST00000452372 CST7O76096 145 aa14.84□□□□□ -0.03
COL9A3-202ENST00000452372 NUP62P37198 522 aaPredicted RBP14.84□□□□□ -0.03
COL9A3-202ENST00000452372 SULT1A1P50225 295 aa14.84□□□□□ -0.03
COL9A3-202ENST00000452372 AP2S1P53680 142 aaPredicted RBP14.84□□□□□ -0.03
COL9A3-202ENST00000452372 CMC4P56277 68 aaPredicted RBP14.84□□□□□ -0.03
COL9A3-202ENST00000452372 SLC38A11Q08AI6 406 aa14.84□□□□□ -0.03
COL9A3-202ENST00000452372 RGS21Q2M5E4 152 aa14.84□□□□□ -0.03
COL9A3-202ENST00000452372 TEPPQ6URK8 271 aa14.84□□□□□ -0.03
COL9A3-202ENST00000452372 CYP2G1PQ6ZSU1 146 aa14.84□□□□□ -0.03
COL9A3-202ENST00000452372 TMEM252Q8N6L7 170 aa14.84□□□□□ -0.03
COL9A3-202ENST00000452372 UBQLN2Q9UHD9 624 aa14.84□□□□□ -0.03
COL9A3-202ENST00000452372 IGSF23A1L1A6 192 aa14.83□□□□□ -0.04
COL9A3-202ENST00000452372 RBMY1BA6NDE4 496 aaKnown RBP14.83□□□□□ -0.04
COL9A3-202ENST00000452372 RBMY1EA6NEQ0 496 aaKnown RBP14.83□□□□□ -0.04
COL9A3-202ENST00000452372 E5RGE8 158 aa14.83□□□□□ -0.04
COL9A3-202ENST00000452372 DNASE2O00115 360 aaPredicted RBP14.83□□□□□ -0.04
COL9A3-202ENST00000452372 RBMY1DP0C7P1 496 aaKnown RBP14.83□□□□□ -0.04
COL9A3-202ENST00000452372 GATA2P23769 480 aaPredicted RBP14.83□□□□□ -0.04
COL9A3-202ENST00000452372 SELENOTP62341 195 aa14.83□□□□□ -0.04
COL9A3-202ENST00000452372 LRRC37A5PQ49AS3 106 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms