RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 PLEKHJ1Q9NW61 149 aa2.03□□□□□ -2.08
PMS1-215ENST00000447232 DOK5Q9P104 306 aa2.03□□□□□ -2.08
PMS1-215ENST00000447232 RBM7Q9Y580 266 aaKnown RBP2.03□□□□□ -2.08
PMS1-215ENST00000447232 A0A0B4J293 547 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 IGHV3-38A0A0C4DH36 116 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 TMEM14DPA8MWL7 114 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 PRYO14603 147 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 EDF1O60869 148 aaKnown RBP2.03□□□□□ -2.09
PMS1-215ENST00000447232 CD36P16671 472 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 MT3P25713 68 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 UCP1P25874 307 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 TAS2R31P59538 309 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 PRCDQ00LT1 54 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 MRPL28Q13084 256 aaKnown RBP2.03□□□□□ -2.09
PMS1-215ENST00000447232 CIRBPQ14011 172 aaKnown RBP2.03□□□□□ -2.09
PMS1-215ENST00000447232 PRR4Q16378 134 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 FFAR4Q5NUL3 377 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 GPR141Q7Z602 305 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 CROCCP2Q86T23 111 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 OR52E5Q8NH55 327 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 TCTEX1D2Q8WW35 142 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 BAALCQ8WXS3 180 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 LINC01587Q99440 93 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 KIF25-AS1Q9Y6Z4 181 aa2.03□□□□□ -2.09
PMS1-215ENST00000447232 MACF1Q9UPN3 7388 aaKnown RBP2.02□□□□□ -2.09
PMS1-215ENST00000447232 TRAV12-2A0A075B6T6 113 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 TRBV5-5A0A0J9YX44 114 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 RBFOX2O43251 390 aaKnown RBP eCLIP2.02□□□□□ -2.09
PMS1-215ENST00000447232 IGKV1-17P01599 117 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 CDK1P06493 297 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 CLDN12P56749 244 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 QRFPP83859 136 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 DHODHQ02127 395 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 SPINK6Q6UWN8 80 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 Q6ZTI0 123 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 ACBD7Q8N6N7 88 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 THAP8Q8NA92 274 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 OR8J1Q8NGP2 316 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 DNAJC9Q8WXX5 260 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 GPR146Q96CH1 333 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 TMEM59Q9BXS4 323 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 CCSO14618 274 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 SLC22A5O76082 557 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 HLA-DQB1P01920 261 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 UBBP0CG47 229 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 HTN1P15515 57 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 NQO2P16083 231 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 ID1P41134 155 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 GTF2A1P52655 376 aaPredicted RBP2.02□□□□□ -2.09
PMS1-215ENST00000447232 CRYBA4P53673 196 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 TMEM50BP56557 158 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 DAZ2Q13117 558 aaKnown RBP2.02□□□□□ -2.09
PMS1-215ENST00000447232 PIK3CD-AS1Q5SR53 167 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 FAM89BQ8N5H3 189 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 COQ8AQ8NI60 647 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 MRPL36Q9P0J6 103 aaKnown RBP2.02□□□□□ -2.09
PMS1-215ENST00000447232 PRO0255Q9UI72 69 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 SPATA2Q9UM82 520 aa2.02□□□□□ -2.09
PMS1-215ENST00000447232 IGKV1D-13A0A0B4J2D9 117 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 K7EQD1 137 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 ISLRO14498 428 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 PHOX2AO14813 284 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 CLN5O75503 358 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 FAM107AO95990 144 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 FCGR3AP08637 254 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 IGKV1-13P0DP09 117 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 DAPP51397 102 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 CNN1P51911 297 aaKnown RBP2.01□□□□□ -2.09
PMS1-215ENST00000447232 RPS11P62280 158 aaKnown RBP eCLIP2.01□□□□□ -2.09
PMS1-215ENST00000447232 PRR3P79522 188 aaKnown RBP2.01□□□□□ -2.09
PMS1-215ENST00000447232 SRSF9Q13242 221 aaKnown RBP eCLIP2.01□□□□□ -2.09
PMS1-215ENST00000447232 XAF1Q6GPH4 301 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 ZFP41Q8N8Y5 198 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 TMEM203Q969S6 136 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 TMEM230Q96A57 120 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 PINX1Q96BK5 328 aaKnown RBP2.01□□□□□ -2.09
PMS1-215ENST00000447232 TMEM56Q96MV1 263 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 CMSS1Q9BQ75 279 aaKnown RBP2.01□□□□□ -2.09
PMS1-215ENST00000447232 GINS4Q9BRT9 223 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 LPAR5Q9H1C0 372 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 SLC25A32Q9H2D1 315 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 SDF2L1Q9HCN8 221 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 TAS2R8Q9NYW2 309 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 CKLFQ9UBR5 152 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 TAGLN3Q9UI15 199 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 TMEM235A6NFC5 223 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 IFITM10A6NMD0 228 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 BOLA2-SMG1P6H3BVE0 249 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 H7BYZ3 331 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 PRAF2O60831 178 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 HPRT1P00492 218 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 SFXN4Q6P4A7 337 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 LHFPL3Q86UP9 236 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 SPAG16Q8N0X2 631 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 NKAIN3Q8N8D7 197 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 BLNKQ8WV28 456 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 ARHGAP5-AS1Q96IT6 56 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 PECRQ9BY49 303 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 KCNK15Q9H427 330 aa2.01□□□□□ -2.09
PMS1-215ENST00000447232 RPRMQ9NS64 109 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms