RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 MUC21Q5SSG8 566 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 KIR3DL3Q8N743 410 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 SCO2A0A1W2PP80 73 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 UQCR10Q9UDW1 63 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 TRBV7-9A0A0J9YWB2 115 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 RPL35AP18077 110 aaKnown RBP9.28□□□□□ -0.92
FN1-211ENST00000443816 COL5A1-AS1Q5SY13 56 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 ZNF324BQ6AW86 544 aaPredicted RBP9.28□□□□□ -0.92
FN1-211ENST00000443816 TRAV9-1A0A075B6T8 112 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 J3QLI3 93 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 TBX6O95947 436 aaPredicted RBP9.28□□□□□ -0.92
FN1-211ENST00000443816 ZNF25P17030 456 aaPredicted RBP9.28□□□□□ -0.92
FN1-211ENST00000443816 TMEM183AQ8IXX5 376 aa9.28□□□□□ -0.92
FN1-211ENST00000443816 A0A087WX48 190 aa9.27□□□□□ -0.92
FN1-211ENST00000443816 MIR17HGQ75NE6 70 aa9.27□□□□□ -0.93
FN1-211ENST00000443816 NEUROG1Q92886 237 aa9.27□□□□□ -0.93
FN1-211ENST00000443816 SRSF8Q9BRL6 282 aaKnown RBP9.27□□□□□ -0.93
FN1-211ENST00000443816 TNRC6AQ8NDV7 1962 aaKnown RBP9.27□□□□□ -0.93
FN1-211ENST00000443816 HIGD1CA8MV81 97 aa9.27□□□□□ -0.93
FN1-211ENST00000443816 LCN12Q6JVE5 192 aa9.27□□□□□ -0.93
FN1-211ENST00000443816 C5orf64Q2M2E5 130 aa9.27□□□□□ -0.93
FN1-211ENST00000443816 SLC25A34Q6PIV7 304 aa9.27□□□□□ -0.93
FN1-211ENST00000443816 IGFL3Q6UXB1 125 aa9.27□□□□□ -0.93
FN1-211ENST00000443816 BRD3OSQ6XYD6 125 aa9.27□□□□□ -0.93
FN1-211ENST00000443816 PEF1Q9UBV8 284 aaKnown RBP9.27□□□□□ -0.93
FN1-211ENST00000443816 SRSF6Q13247 344 aaKnown RBP9.27□□□□□ -0.93
FN1-211ENST00000443816 MLNRO43193 412 aa9.27□□□□□ -0.93
FN1-211ENST00000443816 CKS1BP61024 79 aa9.27□□□□□ -0.93
FN1-211ENST00000443816 PLXNB1O43157 2135 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 SOD3P08294 240 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 C18orf15Q96N68 181 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 FBLN5Q9UBX5 448 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 SAA4P35542 130 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 F11RQ9Y624 299 aaKnown RBP9.26□□□□□ -0.93
FN1-211ENST00000443816 FGFBP3Q8TAT2 258 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 RCHY1Q96PM5 261 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 TRAF4Q9BUZ4 470 aaPredicted RBP9.26□□□□□ -0.93
FN1-211ENST00000443816 LINC01549A6NIU2 74 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 E7EQL1 145 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 TMEM50AO95807 157 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 CHCHD5Q9BSY4 110 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 CREBBPQ92793 2442 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 KIAA1644Q3SXP7 199 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 GAS1P54826 345 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 SRSF1Q07955 248 aaKnown RBP eCLIP9.26□□□□□ -0.932e-6■□□□□ 8.6
FN1-211ENST00000443816 ASCL4Q6XD76 172 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 EPDR1Q9UM22 224 aa9.26□□□□□ -0.93
FN1-211ENST00000443816 APOHP02749 345 aaPredicted RBP9.25□□□□□ -0.93
FN1-211ENST00000443816 IZUMO1RA6ND01 250 aa9.25□□□□□ -0.93
FN1-211ENST00000443816 RNF182Q8N6D2 247 aa9.25□□□□□ -0.93
FN1-211ENST00000443816 SEPSECSQ9HD40 501 aaKnown RBP9.25□□□□□ -0.93
FN1-211ENST00000443816 INSP01308 110 aa9.25□□□□□ -0.93
FN1-211ENST00000443816 GAGE10A6NGK3 116 aa9.25□□□□□ -0.93
FN1-211ENST00000443816 C1QTNF9BB2RNN3 333 aa9.25□□□□□ -0.93
FN1-211ENST00000443816 TCF21O43680 179 aa9.25□□□□□ -0.93
FN1-211ENST00000443816 C1QTNF9P0C862 333 aa9.25□□□□□ -0.93
FN1-211ENST00000443816 TMEM86BQ8N661 226 aa9.25□□□□□ -0.93
FN1-211ENST00000443816 NXT2Q9NPJ8 142 aaKnown RBP9.25□□□□□ -0.93
FN1-211ENST00000443816 PLA2G2CQ5R387 149 aa9.25□□□□□ -0.93
FN1-211ENST00000443816 NABP1Q96AH0 204 aa9.25□□□□□ -0.93
FN1-211ENST00000443816 LINC00477Q96M19 166 aa9.25□□□□□ -0.93
FN1-211ENST00000443816 SDHCQ99643 169 aaPredicted RBP9.25□□□□□ -0.93
FN1-211ENST00000443816 MCRIP2Q9BUT9 160 aaKnown RBP9.25□□□□□ -0.93
FN1-211ENST00000443816 LINC00527Q9UJ94 153 aa9.25□□□□□ -0.93
FN1-211ENST00000443816 PTPRQQ9UMZ3 2332 aa9.25□□□□□ -0.93
FN1-211ENST00000443816 TGIF2-C20orf24A0A0A6YYL0 155 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 EREGO14944 169 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 PPBPP02775 128 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 ZMAT4Q9H898 229 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 MRPL16Q9NX20 251 aaKnown RBP9.24□□□□□ -0.93
FN1-211ENST00000443816 MST1P26927 711 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 FHITP49789 147 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 ACTL10Q5JWF8 245 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 TRGV9Q99603 122 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 BEX4Q9NWD9 120 aaPredicted RBP9.24□□□□□ -0.93
FN1-211ENST00000443816 SMIM13P0DJ93 91 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 MDKP21741 143 aaPredicted RBP9.24□□□□□ -0.93
FN1-211ENST00000443816 NMBP08949 121 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 CBLN1P23435 193 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 ORMDL2Q53FV1 153 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 ZNF506Q5JVG8 444 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 CYSLTR1Q9Y271 337 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 ZNF815PA8K554 130 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 NDUFA3O95167 84 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 GATA2P23769 480 aaPredicted RBP9.24□□□□□ -0.93
FN1-211ENST00000443816 CD300CQ08708 224 aa9.24□□□□□ -0.93
FN1-211ENST00000443816 APOC4P55056 127 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 PAQR4Q8N4S7 273 aaPredicted RBP9.23□□□□□ -0.93
FN1-211ENST00000443816 BEND2Q8NDZ0 799 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 OR10W1Q8NGF6 305 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 PHLDA1Q8WV24 401 aaPredicted RBP9.23□□□□□ -0.93
FN1-211ENST00000443816 ZNF474Q6S9Z5 364 aaPredicted RBP9.23□□□□□ -0.93
FN1-211ENST00000443816 NRN1Q9NPD7 142 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 IGKV3D-20A0A0C4DH25 116 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 SLC25A39Q9BZJ4 359 aaPredicted RBP9.23□□□□□ -0.93
FN1-211ENST00000443816 TRAV8-6A0A0B4J262 113 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 IGKV1-9A0A0C4DH69 117 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 GRIFINA4D1Z8 144 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 LINC00587B1AMM8 73 aa9.23□□□□□ -0.93
FN1-211ENST00000443816 IGKV1D-13A0A0B4J2D9 117 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms