RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 IGHV1-46P01743 117 aa12.31□□□□□ -0.44
CDC42EP4-202ENST00000439510 TNFAIP6P98066 277 aaPredicted RBP12.31□□□□□ -0.44
CDC42EP4-202ENST00000439510 OR4F17Q8NGA8 305 aa12.31□□□□□ -0.44
CDC42EP4-202ENST00000439510 KLF12Q9Y4X4 402 aa12.31□□□□□ -0.44
CDC42EP4-202ENST00000439510 CGB1A6NKQ9 187 aa12.31□□□□□ -0.44
CDC42EP4-202ENST00000439510 WT1-ASQ06250 92 aa12.31□□□□□ -0.44
CDC42EP4-202ENST00000439510 Q56UQ5 140 aa12.31□□□□□ -0.44
CDC42EP4-202ENST00000439510 RNASEKQ6P5S7 137 aaKnown RBP12.31□□□□□ -0.44
CDC42EP4-202ENST00000439510 OR4A5Q8NH83 315 aa12.31□□□□□ -0.44
CDC42EP4-202ENST00000439510 TMEM167AQ8TBQ9 72 aa12.31□□□□□ -0.44
CDC42EP4-202ENST00000439510 SSBP4Q9BWG4 385 aaPredicted RBP12.31□□□□□ -0.44
CDC42EP4-202ENST00000439510 SMG1Q96Q15 3661 aaKnown RBP12.3□□□□□ -0.44
CDC42EP4-202ENST00000439510 CCL25O15444 150 aa12.3□□□□□ -0.44
CDC42EP4-202ENST00000439510 IGLL1P15814 213 aa12.3□□□□□ -0.44
CDC42EP4-202ENST00000439510 BMI1P35226 326 aa12.3□□□□□ -0.44
CDC42EP4-202ENST00000439510 GPR6P46095 362 aaPredicted RBP12.3□□□□□ -0.44
CDC42EP4-202ENST00000439510 HINT1P49773 126 aaPredicted RBP12.3□□□□□ -0.44
CDC42EP4-202ENST00000439510 TEX36Q5VZQ5 186 aa12.3□□□□□ -0.44
CDC42EP4-202ENST00000439510 PRR27Q6MZM9 219 aa12.3□□□□□ -0.44
CDC42EP4-202ENST00000439510 NPIPB3Q92617 1050 aa12.3□□□□□ -0.44
CDC42EP4-202ENST00000439510 URB1-AS1Q96HZ7 61 aa12.3□□□□□ -0.44
CDC42EP4-202ENST00000439510 COX11Q9Y6N1 276 aa12.3□□□□□ -0.44
CDC42EP4-202ENST00000439510 CORTO00230 105 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 CRXO43186 299 aaPredicted RBP12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 FAM120AOSQ5T036 256 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 ZNF474Q6S9Z5 364 aaPredicted RBP12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 MUC15Q8N387 334 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 C1RLQ9NZP8 487 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 EPDR1Q9UM22 224 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 TLN1Q9Y490 2541 aaKnown RBP12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 IGHV1-69-2A0A0G2JMI3 117 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 CA7P43166 264 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 CAMPP49913 170 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 GNG5P63218 68 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 FAM162BQ5T6X4 162 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 SPATA12Q7Z6I5 190 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 STXBP6Q8NFX7 210 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 ZNF596Q8TC21 504 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 FLYWCH2Q96CP2 140 aaKnown RBP12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 MLST8Q9BVC4 326 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 GAL3ST2Q9H3Q3 398 aa12.29□□□□□ -0.44
CDC42EP4-202ENST00000439510 IGLC7A0M8Q6 106 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 PTTG1IPP53801 180 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 SUB1P53999 127 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 LINC00305Q7Z4B0 112 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 VSTM2AQ8TAG5 236 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 WFDC12Q8WWY7 111 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 TMEM70Q9BUB7 260 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 PRSS22Q9GZN4 317 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 MSRB2Q9Y3D2 182 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 RELNP78509 3460 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 K7EM74 188 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 GOSR1O95249 250 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 HBBP68871 147 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 CT83Q5H943 113 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 UNQ5815/PRO19632Q6UWF5 114 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 S100A7AQ86SG5 101 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 PDPNQ86YL7 162 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 KIR3DL3Q8N743 410 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 ZNF738Q8NE65 137 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 OR4C13Q8NGP0 309 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 GPR82Q96P67 336 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 MRPL36Q9P0J6 103 aaKnown RBP12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 ATRXP46100 2492 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 MEF2CQ06413 473 aaPredicted RBP12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 UBE2V1Q13404 147 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 RPP21Q9H633 154 aaKnown RBP12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 SOX21Q9Y651 276 aaPredicted RBP12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 NAV3Q8IVL0 2385 aa12.28□□□□□ -0.44
CDC42EP4-202ENST00000439510 CACNA1AO00555 2505 aa12.27□□□□□ -0.44
CDC42EP4-202ENST00000439510 TNFSF4P23510 183 aa12.27□□□□□ -0.45
CDC42EP4-202ENST00000439510 ZCCHC24Q8N2G6 241 aaKnown RBP12.27□□□□□ -0.45
CDC42EP4-202ENST00000439510 NKX6-3A6NJ46 265 aa12.27□□□□□ -0.45
CDC42EP4-202ENST00000439510 C10orf55Q5SWW7 151 aa12.27□□□□□ -0.45
CDC42EP4-202ENST00000439510 RBMXL3Q8N7X1 1067 aaKnown RBP12.27□□□□□ -0.45
CDC42EP4-202ENST00000439510 SPTA1P02549 2419 aa12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 IGLV2-23P01705 113 aa12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 SLC25A5P05141 298 aaKnown RBP12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 LEMD1Q68G75 181 aa12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 FAM71F2Q6NXP2 309 aa12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 SSX8Q7RTT4 187 aa12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 OR2D3Q8NGH3 330 aa12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 CHCHD1Q96BP2 118 aaKnown RBP12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 PERPQ96FX8 193 aa12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 CLEC5AQ9NY25 188 aa12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 ZNF492Q9P255 531 aa12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 IGHV3-48P01763 117 aa12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 TCF24Q7RTU0 167 aa12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 RAXQ9Y2V3 346 aa12.26□□□□□ -0.45
CDC42EP4-202ENST00000439510 C19orf71A6NCJ1 209 aa12.25□□□□□ -0.45
CDC42EP4-202ENST00000439510 A8MWL6 223 aa12.25□□□□□ -0.45
CDC42EP4-202ENST00000439510 MOSP00540 346 aa12.25□□□□□ -0.45
CDC42EP4-202ENST00000439510 PLAUP00749 431 aa12.25□□□□□ -0.45
CDC42EP4-202ENST00000439510 LTAP01374 205 aa12.25□□□□□ -0.45
CDC42EP4-202ENST00000439510 LINC00322Q6ZN03 302 aaPredicted RBP12.25□□□□□ -0.45
CDC42EP4-202ENST00000439510 Q6ZVH6 145 aa12.25□□□□□ -0.45
CDC42EP4-202ENST00000439510 ST20Q9HBF5 79 aa12.25□□□□□ -0.45
CDC42EP4-202ENST00000439510 PGPA6NDG6 321 aa12.25□□□□□ -0.45
CDC42EP4-202ENST00000439510 VSTM5A8MXK1 200 aa12.25□□□□□ -0.45
CDC42EP4-202ENST00000439510 REG1BP48304 166 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms