RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 H0YJW9 148 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 CA1P00915 261 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 DLX1P56177 255 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 DAZAP2Q15038 168 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 MSMPQ1L6U9 139 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 C17orf58Q2M2W7 97 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 IBA57Q5T440 356 aaKnown RBP9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 FAM90A2PQ658T7 463 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 TEX45Q8NA69 505 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 ZNF257Q9Y2Q1 563 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 NBEAQ8NFP9 2946 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 A0A087WWC5 75 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 CD69Q07108 199 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 GUSBP1Q15486 140 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 EAF1Q96JC9 268 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 ITGB1BP1O14713 200 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 IL4P05112 153 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 PRSS1P07477 247 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 TEX36Q5VZQ5 186 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 TREML4Q6UXN2 200 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 LINC00305Q7Z4B0 112 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 OR5R1Q8NH85 324 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 SFRP2Q96HF1 295 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 NAV2Q8IVL1 2488 aa9.44□□□□□ -0.9
TRAPPC9-202ENST00000438773 NAV3Q8IVL0 2385 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 IGHV1-3A0A0C4DH29 117 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 SHISA9B4DS77 424 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 M0QZK8 103 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 GGCTO75223 188 aaKnown RBP9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 CD99P14209 185 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 ZNF134P52741 427 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 PAX9P55771 341 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 EFNB3Q15768 340 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 WDR73Q6P4I2 378 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 NDUFAF3Q9BU61 184 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 PARD6GQ9BYG4 376 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 GSX1Q9H4S2 264 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 LOXP28300 417 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 TMEM155Q4W5P6 130 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 NMUP48645 174 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 MIR17HGQ75NE6 70 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 RPP25LQ8N5L8 163 aaKnown RBP9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 ARPC1AQ92747 370 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 PGLYRP4Q96LB8 373 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 BPESC1Q9GZL8 116 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 RNASE7Q9H1E1 156 aaKnown RBP9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 TBL2Q9Y4P3 447 aaKnown RBP9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 TNCP24821 2201 aa9.43□□□□□ -0.9
TRAPPC9-202ENST00000438773 C15orf62A8K5M9 175 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 P01737 135 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 ZNF726P1Q15940 193 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 PRSS8Q16651 343 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 TM4SF20Q53R12 229 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 ZNF738Q8NE65 137 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 SLC25A33Q9BSK2 321 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 MRPL32Q9BYC8 188 aaKnown RBP9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 NCOR1P1Q9H4R4 102 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 TRAV30A0A087WSZ9 112 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 ZNF664Q8N3J9 261 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 IGHV3-23P01764 117 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 LOXL3P58215 753 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 CENPWQ5EE01 88 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 DPF1Q92782 380 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 SSBP4Q9BWG4 385 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 GGTLC1Q9BX51 225 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 MUC3AQ02505 3323 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 COL6A3P12111 3177 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 EREGO14944 169 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 PRNTQ86SH4 94 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 TMEM167AQ8TBQ9 72 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 ZNF418Q8TF45 676 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 TMEM191AQ9H0A3 160 aa9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 TNRC6AQ8NDV7 1962 aaKnown RBP9.42□□□□□ -0.9
TRAPPC9-202ENST00000438773 BUB1B-PAK6H3BSN5 160 aa9.41□□□□□ -0.9
TRAPPC9-202ENST00000438773 S100A4P26447 101 aaKnown RBP9.41□□□□□ -0.9
TRAPPC9-202ENST00000438773 BMI1P35226 326 aa9.41□□□□□ -0.9
TRAPPC9-202ENST00000438773 WFDC3Q8IUB2 231 aa9.41□□□□□ -0.9
TRAPPC9-202ENST00000438773 KCNS1Q96KK3 526 aa9.41□□□□□ -0.9
TRAPPC9-202ENST00000438773 F11RQ9Y624 299 aaKnown RBP9.41□□□□□ -0.9
TRAPPC9-202ENST00000438773 JOSD1Q15040 202 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC9-202ENST00000438773 VMO1Q7Z5L0 202 aa9.41□□□□□ -0.9
TRAPPC9-202ENST00000438773 ZNF295-AS1Q8N0V1 137 aa9.41□□□□□ -0.9
TRAPPC9-202ENST00000438773 MBD3L1Q8WWY6 194 aa9.41□□□□□ -0.9
TRAPPC9-202ENST00000438773 C21orf62Q9NYP8 219 aa9.41□□□□□ -0.9
TRAPPC9-202ENST00000438773 FBXL7Q9UJT9 491 aa9.41□□□□□ -0.9
TRAPPC9-202ENST00000438773 HIVEP2P31629 2446 aa9.41□□□□□ -0.9
TRAPPC9-202ENST00000438773 IGHV3OR16-8A0A075B7F1 116 aa9.4□□□□□ -0.9
TRAPPC9-202ENST00000438773 NBEAP1P0C6P0 100 aa9.4□□□□□ -0.9
TRAPPC9-202ENST00000438773 GZMBP10144 247 aa9.4□□□□□ -0.9
TRAPPC9-202ENST00000438773 ADMP35318 185 aa9.4□□□□□ -0.9
TRAPPC9-202ENST00000438773 TPTE2P1Q5T6R2 138 aa9.4□□□□□ -0.9
TRAPPC9-202ENST00000438773 ARL6IP6Q8N6S5 226 aa9.4□□□□□ -0.9
TRAPPC9-202ENST00000438773 IGHV3OR16-13A0A075B7E8 117 aa9.4□□□□□ -0.9
TRAPPC9-202ENST00000438773 IGHV3-74A0A0B4J1X5 117 aa9.4□□□□□ -0.9
TRAPPC9-202ENST00000438773 TRAV40A0A0B4J280 105 aa9.4□□□□□ -0.9
TRAPPC9-202ENST00000438773 HAX1O00165 279 aa9.4□□□□□ -0.9
TRAPPC9-202ENST00000438773 LHBP01229 141 aa9.4□□□□□ -0.9
TRAPPC9-202ENST00000438773 HIST1H1EP10412 219 aaKnown RBP9.4□□□□□ -0.9
TRAPPC9-202ENST00000438773 PAFAH1B2P68402 229 aa9.4□□□□□ -0.9
TRAPPC9-202ENST00000438773 KIR3DL3Q8N743 410 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms