RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 S100A7L2Q5SY68 101 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 SPAG8Q99932 426 aaPredicted RBP8.54□□□□□ -1.04
SHPRH-206ENST00000438092 ADAMTS7Q9UKP4 1686 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 A0A1B0GWB2 263 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 PAX2Q02962 417 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 CIARTQ8N365 385 aaPredicted RBP8.54□□□□□ -1.04
SHPRH-206ENST00000438092 FAM110DQ8TAY7 271 aaPredicted RBP8.54□□□□□ -1.04
SHPRH-206ENST00000438092 LSM4Q9Y4Z0 139 aaKnown RBP8.54□□□□□ -1.04
SHPRH-206ENST00000438092 IFI6P09912 130 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 ADMP35318 185 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 LYPD2Q6UXB3 125 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 C1QL4Q86Z23 238 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 CST9LQ9H4G1 147 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 HELZP42694 1942 aaKnown RBP8.54□□□□□ -1.04
SHPRH-206ENST00000438092 ROS1P08922 2347 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 DEFB130BP0DP73 79 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 DEFB130AP0DP74 79 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 TTC9CQ8N5M4 171 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 CACNG8Q8WXS5 425 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 EPDR1Q9UM22 224 aa8.54□□□□□ -1.04
SHPRH-206ENST00000438092 TRBV6-7A0A0A0MS04 114 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 NCR2O95944 276 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 TBX6O95947 436 aaPredicted RBP8.53□□□□□ -1.04
SHPRH-206ENST00000438092 Q96MF0 132 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 GGACTQ9BVM4 153 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 MBNL3Q9NUK0 354 aaKnown RBP8.53□□□□□ -1.04
SHPRH-206ENST00000438092 MYLKQ15746 1914 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 WDR90Q96KV7 1748 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 SIPA1L1O43166 1804 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 IZUMO1RA6ND01 250 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 NTN3O00634 580 aaPredicted RBP8.53□□□□□ -1.04
SHPRH-206ENST00000438092 PRADC1Q9BSG0 188 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 DDTP30046 118 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 GGNQ86UU5 652 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 FLVCR1-AS1Q8TAF5 88 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 C18orf12Q96KH6 178 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 RPUSD1Q9UJJ7 312 aaKnown RBP8.53□□□□□ -1.04
SHPRH-206ENST00000438092 TMEM178BH3BS89 294 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 HBDP02042 147 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 DTX2Q86UW9 622 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 GATD1Q8NB37 220 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 PLXND1Q9Y4D7 1925 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 IGKV1D-8A0A087WSZ0 117 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 LOC102723996A0A087X1L8 192 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 IGHV1-3A0A0C4DH29 117 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 GATA4P43694 442 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 TMEM144Q7Z5S9 345 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 ZNRD1Q9P1U0 126 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 DYSFO75923 2080 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 IGLV3-12A0A075B6K2 115 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 FOXL1Q12952 345 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 PVRIGQ6DKI7 326 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 USF3Q68DE3 2245 aa8.53□□□□□ -1.04
SHPRH-206ENST00000438092 TRAV3A0A0B4J244 114 aa8.52□□□□□ -1.04
SHPRH-206ENST00000438092 C19orf67A6NJJ6 358 aa8.52□□□□□ -1.04
SHPRH-206ENST00000438092 B4DSR2 109 aa8.52□□□□□ -1.04
SHPRH-206ENST00000438092 IGHV1-8P0DP01 117 aa8.52□□□□□ -1.04
SHPRH-206ENST00000438092 DUTP33316 252 aaKnown RBP8.52□□□□□ -1.04
SHPRH-206ENST00000438092 CD300EQ496F6 205 aaPredicted RBP8.52□□□□□ -1.04
SHPRH-206ENST00000438092 NHLRC3Q5JS37 347 aa8.52□□□□□ -1.04
SHPRH-206ENST00000438092 Q8TAT8 98 aa8.52□□□□□ -1.04
SHPRH-206ENST00000438092 KLHDC3Q9BQ90 382 aa8.52□□□□□ -1.04
SHPRH-206ENST00000438092 SLC50A1Q9BRV3 221 aa8.52□□□□□ -1.04
SHPRH-206ENST00000438092 SRRM4A7MD48 611 aaKnown RBP8.52□□□□□ -1.05
SHPRH-206ENST00000438092 SRP19P09132 144 aaKnown RBP8.52□□□□□ -1.05
SHPRH-206ENST00000438092 TPTE2P1Q5T6R2 138 aa8.52□□□□□ -1.05
SHPRH-206ENST00000438092 SPATA31B1PQ5VZV4 182 aa8.52□□□□□ -1.05
SHPRH-206ENST00000438092 LINC00114Q6XXX2 140 aa8.52□□□□□ -1.05
SHPRH-206ENST00000438092 RNF182Q8N6D2 247 aa8.52□□□□□ -1.05
SHPRH-206ENST00000438092 VSIRQ9H7M9 311 aa8.52□□□□□ -1.05
SHPRH-206ENST00000438092 ATP5IP56385 69 aaPredicted RBP8.52□□□□□ -1.05
SHPRH-206ENST00000438092 MRAPQ8TCY5 172 aa8.52□□□□□ -1.05
SHPRH-206ENST00000438092 DMRTC2Q8IXT2 367 aaPredicted RBP8.52□□□□□ -1.05
SHPRH-206ENST00000438092 CD177Q8N6Q3 437 aa8.52□□□□□ -1.05
SHPRH-206ENST00000438092 CHTOPQ9Y3Y2 248 aaKnown RBP8.52□□□□□ -1.05
SHPRH-206ENST00000438092 SSC4DQ8WTU2 575 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 TRGV11A0A075B6L2 103 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 EFNA2O43921 213 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 C5orf63A6NC05 138 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 DSCR9P59020 149 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 EFNB3Q15768 340 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 LINC00477Q96M19 166 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 ZNF407Q9C0G0 2248 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 IGFBP3P17936 291 aaPredicted RBP8.51□□□□□ -1.05
SHPRH-206ENST00000438092 SRSF3P84103 164 aaKnown RBP8.51□□□□□ -1.05
SHPRH-206ENST00000438092 NHP2Q9NX24 153 aaKnown RBP8.51□□□□□ -1.05
SHPRH-206ENST00000438092 SLC25A15Q9Y619 301 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 PCNX1Q96RV3 2341 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 A0A1B0GV90 55 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 F8VVB4 439 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 F8VWA3 439 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 TIMP3P35625 211 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 SYNJ2BPP57105 145 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 RPL23P62829 140 aaKnown RBP8.51□□□□□ -1.05
SHPRH-206ENST00000438092 SRSF1Q07955 248 aaKnown RBP eCLIP8.51□□□□□ -1.05
SHPRH-206ENST00000438092 NACAE9PAV3 2078 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 PSG1P11464 419 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 ZNF876PQ49A33 203 aa8.51□□□□□ -1.05
SHPRH-206ENST00000438092 PSPNO60542 156 aa8.5□□□□□ -1.05
SHPRH-206ENST00000438092 FNDC4Q9H6D8 234 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms