RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 GVINP1Q7Z2Y8 2422 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 LYNX1G3V0Z9 82 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 LYNX1P0DP58 116 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 ZNF138P52744 262 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 GGTLC1Q9BX51 225 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 SLC17A3O00476 420 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 LDLRAD4O15165 306 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 CXCL2P19875 107 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 TPTE2P1Q5T6R2 138 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 C1QL2Q7Z5L3 287 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 CCL20P78556 96 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 C14orf144Q96I85 54 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 INAFM2P0DMQ5 153 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 PUSL1Q8N0Z8 303 aaKnown RBP9.29□□□□□ -0.92
SCN4A-201ENST00000435607 NHP2Q9NX24 153 aaKnown RBP9.29□□□□□ -0.92
SCN4A-201ENST00000435607 NOTCH3Q9UM47 2321 aa9.29□□□□□ -0.92
SCN4A-201ENST00000435607 CTAG1AP78358 180 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 C21orf62-AS1Q17RA5 79 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 LINC00527Q9UJ94 153 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 LRRK1Q38SD2 2015 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 IGHV1-18A0A0C4DH31 117 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 CLPSP04118 112 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 A0A1W2PRE2 83 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 SNAI2O43623 268 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 LINC00271P0C7V0 271 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 Q5PR19 223 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 FREM3P0C091 2139 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 DMRTA1Q5VZB9 504 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 ATRXP46100 2492 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 ZNF497Q6ZNH5 498 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 SPRED2Q7Z698 418 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 SCN5AQ14524 2016 aa9.28□□□□□ -0.92
SCN4A-201ENST00000435607 FCN3O75636 299 aa9.27□□□□□ -0.92
SCN4A-201ENST00000435607 FAM110DQ8TAY7 271 aaPredicted RBP9.27□□□□□ -0.92
SCN4A-201ENST00000435607 CHCHD1Q96BP2 118 aaKnown RBP9.27□□□□□ -0.92
SCN4A-201ENST00000435607 STRCP1A6NGW2 1772 aa9.27□□□□□ -0.92
SCN4A-201ENST00000435607 IGLV3-19P01714 112 aa9.27□□□□□ -0.93
SCN4A-201ENST00000435607 DERL1Q9BUN8 251 aa9.27□□□□□ -0.93
SCN4A-201ENST00000435607 TAF1LQ8IZX4 1826 aa9.27□□□□□ -0.93
SCN4A-201ENST00000435607 IGHV1-46P01743 117 aa9.27□□□□□ -0.93
SCN4A-201ENST00000435607 ZNF114Q8NC26 417 aa9.27□□□□□ -0.93
SCN4A-201ENST00000435607 CLDN16Q9Y5I7 305 aa9.27□□□□□ -0.93
SCN4A-201ENST00000435607 FXYD7P58549 80 aa9.27□□□□□ -0.93
SCN4A-201ENST00000435607 FBLIM1Q8WUP2 373 aa9.27□□□□□ -0.93
SCN4A-201ENST00000435607 CHAC1Q9BUX1 264 aa9.27□□□□□ -0.93
SCN4A-201ENST00000435607 DKK4Q9UBT3 224 aa9.27□□□□□ -0.93
SCN4A-201ENST00000435607 CD5LO43866 347 aa9.27□□□□□ -0.93
SCN4A-201ENST00000435607 PPIFP30405 207 aaKnown RBP9.27□□□□□ -0.93
SCN4A-201ENST00000435607 CHD3Q12873 2000 aaKnown RBP9.27□□□□□ -0.93
SCN4A-201ENST00000435607 PRB3Q04118 309 aaPredicted RBP9.26□□□□□ -0.93
SCN4A-201ENST00000435607 CD300EQ496F6 205 aaPredicted RBP9.26□□□□□ -0.93
SCN4A-201ENST00000435607 A0A0G2JMM0 328 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 A0A1W2PPB8 328 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 A0A1W2PRS3 328 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 NPIPB5A8MRT5 1133 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 KIR3DP1A8MWS1 328 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 GNG5P63218 68 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 CT83Q5H943 113 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 PRDM13Q9H4Q3 707 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 NEUROG3Q9Y4Z2 214 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 TRBV25-1A0A075B6N4 114 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 RHODO00212 210 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 PRIMA1Q86XR5 153 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 OSTCQ9NRP0 149 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 ESDP10768 282 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 GATA2P23769 480 aaPredicted RBP9.26□□□□□ -0.93
SCN4A-201ENST00000435607 ANAPC13Q9BS18 74 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 PPP1R3EQ9H7J1 279 aa9.26□□□□□ -0.93
SCN4A-201ENST00000435607 LINC01619G3V211 115 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 MMP23AO75900 390 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 IFI27L1Q96BM0 104 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 SPTAN1Q13813 2472 aaKnown RBP9.25□□□□□ -0.93
SCN4A-201ENST00000435607 RNF223E7ERA6 249 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 IGHV1-8P0DP01 117 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 FAM219BQ5XKK7 198 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 DAZ1Q9NQZ3 744 aaKnown RBP9.25□□□□□ -0.93
SCN4A-201ENST00000435607 A0A1B0GV90 55 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 TMEM178BH3BS89 294 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 NPC2P61916 151 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 BRD3OSQ6XYD6 125 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 Q96MF0 132 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 SLAQ13239 276 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 SPRR3Q9UBC9 169 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 SUPT4H1P63272 117 aaKnown RBP9.25□□□□□ -0.93
SCN4A-201ENST00000435607 PLAC1Q9HBJ0 212 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 RFNGQ9Y644 331 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 TRAV13-1A0A0B4J241 112 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 IGHV1-3A0A0C4DH29 117 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 MSMBP08118 114 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 UBE2BP63146 152 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 SFTA2Q6UW10 78 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 LSM4Q9Y4Z0 139 aaKnown RBP9.25□□□□□ -0.93
SCN4A-201ENST00000435607 NCOR1O75376 2440 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 ATP5G3P48201 142 aa9.25□□□□□ -0.93
SCN4A-201ENST00000435607 MRPL14Q6P1L8 145 aaKnown RBP9.25□□□□□ -0.93
SCN4A-201ENST00000435607 GTF3AQ92664 365 aaKnown RBP9.25□□□□□ -0.93
SCN4A-201ENST00000435607 TRBV6-7A0A0A0MS04 114 aa9.24□□□□□ -0.93
SCN4A-201ENST00000435607 C5orf64Q2M2E5 130 aa9.24□□□□□ -0.93
SCN4A-201ENST00000435607 ZCCHC24Q8N2G6 241 aaKnown RBP9.24□□□□□ -0.93
SCN4A-201ENST00000435607 ERVH48-1M5A8F1 160 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms