RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 SUPT4H1P63272 117 aaKnown RBP12.72□□□□□ -0.37
NEDD4-202ENST00000435532 OR13C6PQ8NH95 151 aa12.72□□□□□ -0.37
NEDD4-202ENST00000435532 C7orf71A4D174 169 aa12.71□□□□□ -0.37
NEDD4-202ENST00000435532 TMEM170BQ5T4T1 132 aa12.71□□□□□ -0.37
NEDD4-202ENST00000435532 HSPB9Q9BQS6 159 aa12.71□□□□□ -0.37
NEDD4-202ENST00000435532 PYYP10082 97 aa12.71□□□□□ -0.37
NEDD4-202ENST00000435532 APOC4P55056 127 aa12.71□□□□□ -0.37
NEDD4-202ENST00000435532 PTPRDP23468 1912 aa12.71□□□□□ -0.38
NEDD4-202ENST00000435532 ORMDL3Q8N138 153 aa12.71□□□□□ -0.38
NEDD4-202ENST00000435532 CHCHD5Q9BSY4 110 aa12.71□□□□□ -0.38
NEDD4-202ENST00000435532 IZUMO1RA6ND01 250 aa12.7□□□□□ -0.38
NEDD4-202ENST00000435532 IFI27P40305 119 aaPredicted RBP12.7□□□□□ -0.38
NEDD4-202ENST00000435532 CCL20P78556 96 aa12.7□□□□□ -0.38
NEDD4-202ENST00000435532 COTL1Q14019 142 aa12.7□□□□□ -0.38
NEDD4-202ENST00000435532 RNF151Q2KHN1 245 aa12.7□□□□□ -0.38
NEDD4-202ENST00000435532 TMEM50AO95807 157 aa12.7□□□□□ -0.38
NEDD4-202ENST00000435532 LMO1P25800 156 aa12.7□□□□□ -0.38
NEDD4-202ENST00000435532 PI4KAP42356 2102 aa12.7□□□□□ -0.38
NEDD4-202ENST00000435532 NR2C2APQ86WQ0 139 aa12.7□□□□□ -0.38
NEDD4-202ENST00000435532 MPTX1A8MV57 137 aa12.7□□□□□ -0.38
NEDD4-202ENST00000435532 K7EM74 188 aa12.7□□□□□ -0.38
NEDD4-202ENST00000435532 PSCAO43653 123 aa12.7□□□□□ -0.38
NEDD4-202ENST00000435532 MDKP21741 143 aaPredicted RBP12.7□□□□□ -0.38
NEDD4-202ENST00000435532 RIF1Q5UIP0 2472 aaKnown RBP12.7□□□□□ -0.38
NEDD4-202ENST00000435532 ATP6V0E1O15342 81 aa12.7□□□□□ -0.38
NEDD4-202ENST00000435532 CDX1P47902 265 aaPredicted RBP12.7□□□□□ -0.38
NEDD4-202ENST00000435532 SHISA9B4DS77 424 aa12.69□□□□□ -0.38
NEDD4-202ENST00000435532 TMEM183AQ8IXX5 376 aa12.69□□□□□ -0.38
NEDD4-202ENST00000435532 HIST1H4GQ99525 98 aa12.69□□□□□ -0.38
NEDD4-202ENST00000435532 TOMM7Q9P0U1 55 aa12.69□□□□□ -0.38
NEDD4-202ENST00000435532 CACNA1BQ00975 2339 aa12.69□□□□□ -0.38
NEDD4-202ENST00000435532 A0A087WX48 190 aa12.69□□□□□ -0.38
NEDD4-202ENST00000435532 DNLZQ5SXM8 178 aa12.69□□□□□ -0.38
NEDD4-202ENST00000435532 TREML4Q6UXN2 200 aa12.69□□□□□ -0.38
NEDD4-202ENST00000435532 PLXNA2O75051 1894 aa12.69□□□□□ -0.38
NEDD4-202ENST00000435532 A0A1B0GUS0 222 aa12.69□□□□□ -0.38
NEDD4-202ENST00000435532 H3BVH4 76 aa12.69□□□□□ -0.38
NEDD4-202ENST00000435532 OVOL3O00110 214 aa12.69□□□□□ -0.38
NEDD4-202ENST00000435532 CNTFRP26992 372 aa12.69□□□□□ -0.38
NEDD4-202ENST00000435532 DAZAP2Q15038 168 aaPredicted RBP12.69□□□□□ -0.38
NEDD4-202ENST00000435532 KLF17Q5JT82 389 aaPredicted RBP12.69□□□□□ -0.38
NEDD4-202ENST00000435532 TRGV1A0A0A0MS02 117 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 IGHV2-5P01817 119 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 LOXP28300 417 aaPredicted RBP12.68□□□□□ -0.38
NEDD4-202ENST00000435532 ZNF138P52744 262 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 Q6ZR03 302 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 C1orf122Q6ZSJ8 110 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 LHFPL4Q7Z7J7 247 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 LHFPL1Q86WI0 220 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 LINC00311Q8N616 119 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 WFDC12Q8WWY7 111 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 PRO1933Q9H354 126 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 DKK4Q9UBT3 224 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 CIDEAO60543 219 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 PRORYQ9H606 182 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 ADARB2-AS1A8MUL3 147 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 FGF16O43320 207 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 HOXA3O43365 443 aaPredicted RBP12.68□□□□□ -0.38
NEDD4-202ENST00000435532 NDPQ00604 133 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 TGIF2-C20orf24A0A0A6YYL0 155 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 ZNF98A6NK75 572 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 TRGC2P03986 189 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 HOXA5P20719 270 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 SDHCQ99643 169 aaPredicted RBP12.68□□□□□ -0.38
NEDD4-202ENST00000435532 ZMAT4Q9H898 229 aa12.68□□□□□ -0.38
NEDD4-202ENST00000435532 MUC21A0A0G2JKD1 596 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 MUC21A0A140T8X8 626 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 FCN3O75636 299 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 ELANEP08246 267 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 RPL36AP83881 106 aaKnown RBP12.67□□□□□ -0.38
NEDD4-202ENST00000435532 RPL36ALQ969Q0 106 aaKnown RBP12.67□□□□□ -0.38
NEDD4-202ENST00000435532 SCN8AQ9UQD0 1980 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 PMS2P5A8MQ11 134 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 TCTAP57738 103 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 ZNF414Q96IQ9 312 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 LINC01549A6NIU2 74 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 LINC00473A8K010 186 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 NMSQ5H8A3 153 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 VPS25Q9BRG1 176 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 SCRT1Q9BWW7 348 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 VCX2Q9H322 139 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 KAAG1Q9UBP8 84 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 ZNF833PQ6ZTB9 187 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 IL17RELQ6ZVW7 336 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 OR11H1Q8NG94 326 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 OR11H2Q8NH07 326 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 PMCHL2Q9BQD1 86 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 TRAV3A0A0B4J244 114 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 H7C2G1 150 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 PPBPP02775 128 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 SOD3P08294 240 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 KIAA1644Q3SXP7 199 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 LYPD1Q8N2G4 141 aa12.67□□□□□ -0.38
NEDD4-202ENST00000435532 APOHP02749 345 aaPredicted RBP12.66□□□□□ -0.38
NEDD4-202ENST00000435532 CNOT1A5YKK6 2376 aaKnown RBP12.66□□□□□ -0.38
NEDD4-202ENST00000435532 NRN1Q9NPD7 142 aa12.66□□□□□ -0.38
NEDD4-202ENST00000435532 FNDC10F2Z333 226 aa12.66□□□□□ -0.38
NEDD4-202ENST00000435532 LBHQ53QV2 105 aaPredicted RBP12.66□□□□□ -0.38
NEDD4-202ENST00000435532 Q5BKY6 102 aa12.66□□□□□ -0.38
NEDD4-202ENST00000435532 NCOR1O75376 2440 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms