RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	PPIAL4G	P0DN37	164 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	FOXC1	Q12948	553 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	MUC15	Q8N387	334 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	LINC01560	Q8TB33	94 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	C20orf144	Q9BQM9	153 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	PLXNB1	O43157	2135 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	APCS	P02743	223 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	FAM87A	P0C7U9	286 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	ZNF705D	P0CH99	300 aa	Predicted RBP	12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	ZNF705B	P0CI00	300 aa	Predicted RBP	12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	CDKN1A	P38936	164 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	USF2	Q15853	346 aa	Predicted RBP	12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	TOMM20L	Q6UXN7	152 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	LY6G5B	Q8NDX9	201 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	NUP35	Q8NFH5	326 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	TSKU	Q8WUA8	353 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	KCNS1	Q96KK3	526 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	SRSF8	Q9BRL6	282 aa	Known RBP	12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	SAMD10	Q9BYL1	202 aa		12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	ZNF331	Q9NQX6	463 aa	Predicted RBP	12.81	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	PGP	A6NDG6	321 aa		12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145		I3L2K1	104 aa		12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	SLC25A5	P05141	298 aa	Known RBP	12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	IGLC1	P0CG04	106 aa		12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	SRI	P30626	198 aa		12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	PRB3	Q04118	309 aa	Predicted RBP	12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	ASPHD1	Q5U4P2	390 aa		12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	SIGLECL1	Q8N7X8	197 aa		12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145		Q8N976	141 aa		12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	C5orf17	Q8NAS9	161 aa		12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	GPR82	Q96P67	336 aa		12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	RCHY1	Q96PM5	261 aa		12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	ATG101	Q9BSB4	218 aa		12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	FBXL15	Q9H469	300 aa		12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	RNF114	Q9Y508	228 aa		12.8	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	ADGRG4	Q8IZF6	3080 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145		A0A1W2PS18	150 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	TOMM40	O96008	361 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	APELA	P0DMC3	54 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	HIST1H1E	P10412	219 aa	Known RBP	12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	COX7A1	P24310	79 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	CA7	P43166	264 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	UBE2G1	P62253	170 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	SLA	Q13239	276 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	ZNF672	Q499Z4	452 aa	Predicted RBP	12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	GDF5OS	Q5U4N7	250 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	BLNK	Q8WV28	456 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	SRSF12	Q8WXF0	261 aa	Known RBP	12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	RPE	Q96AT9	228 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	SCNM1	Q9BWG6	230 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	FBXL7	Q9UJT9	491 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	PIEZO2	Q9H5I5	2752 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	SMG1	Q96Q15	3661 aa	Known RBP	12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	MALRD1	Q5VYJ5	2156 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	EREG	O14944	169 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	ZNF253	O75346	499 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	PRSS22	Q9GZN4	317 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	MRPL27	Q9P0M9	148 aa	Known RBP	12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	TMEM14C	Q9P0S9	112 aa		12.79	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	IGHV3-21	A0A0B4J1V1	117 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145		A0A1B0GXF2	115 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	OR2J3	O76001	311 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	LTA	P01374	205 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	LDLRAD2	Q5SZI1	272 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	FMC1	Q96HJ9	113 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	NEU1	Q99519	415 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	ZNF586	Q9NXT0	402 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	ZNF492	Q9P255	531 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	TBL2	Q9Y4P3	447 aa	Known RBP	12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	ZNF324	O75467	553 aa	Predicted RBP	12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	GRN	P28799	593 aa	Known RBP	12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	SST	P61278	116 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	TDRG1	Q3Y452	100 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	CT83	Q5H943	113 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	ATP5L2	Q7Z4Y8	100 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	LHFPL4	Q7Z7J7	247 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	OR8B3	Q8NGG8	313 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	OR8B2	Q96RD0	313 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	SNHG12	Q9BXW3	62 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145		Q9H3A6	140 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	GSX1	Q9H4S2	264 aa	Predicted RBP	12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	NRN1	Q9NPD7	142 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	CBLN4	Q9NTU7	201 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	HIGD1A	Q9Y241	93 aa		12.78	□□□□□ -0.36
HLA-DQB2-231	ENST00000435145	POLE	Q07864	2286 aa		12.77	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	C19orf71	A6NCJ1	209 aa		12.77	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	VWC2L	B2RUY7	222 aa		12.77	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	TCRA	P04437	139 aa		12.77	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	PSG1	P11464	419 aa		12.77	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	C18orf32	Q8TCD1	76 aa		12.77	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	PTPRZ1	P23471	2315 aa	Predicted RBP	12.77	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	DMXL2	Q8TDJ6	3036 aa		12.76	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	FAM90A27P	A6NNH2	459 aa		12.76	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	HIGD1C	A8MV81	97 aa		12.76	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	LIPF	P07098	398 aa		12.76	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	RAB4A	P20338	218 aa		12.76	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	AMT	P48728	403 aa		12.76	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	KLF5	Q13887	457 aa	Predicted RBP	12.76	□□□□□ -0.37
HLA-DQB2-231	ENST00000435145	PRR27	Q6MZM9	219 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms