RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 TRBV6-7A0A0A0MS04 114 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 FAM90A9PA6NNJ1 464 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 SIGLEC5O15389 551 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 CCL1P22362 96 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 PPIFP30405 207 aaKnown RBP7.4□□□□□ -1.22
CTNND1-208ENST00000428599 TEX43Q6ZNM6 134 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 OVOL2Q9BRP0 275 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 USMG5Q96IX5 58 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 EVI2AP22794 236 aa7.4□□□□□ -1.23
CTNND1-208ENST00000428599 H2BFSP57053 126 aa7.4□□□□□ -1.23
CTNND1-208ENST00000428599 ZNF876PQ49A33 203 aa7.4□□□□□ -1.23
CTNND1-208ENST00000428599 LINC00114Q6XXX2 140 aa7.4□□□□□ -1.23
CTNND1-208ENST00000428599 ZNF497Q6ZNH5 498 aa7.4□□□□□ -1.23
CTNND1-208ENST00000428599 ZCCHC24Q8N2G6 241 aaKnown RBP7.4□□□□□ -1.23
CTNND1-208ENST00000428599 MBNL3Q9NUK0 354 aaKnown RBP7.4□□□□□ -1.23
CTNND1-208ENST00000428599 SPRR3Q9UBC9 169 aa7.4□□□□□ -1.23
CTNND1-208ENST00000428599 CEP250Q9BV73 2442 aa7.4□□□□□ -1.23
CTNND1-208ENST00000428599 CCL20P78556 96 aa7.4□□□□□ -1.23
CTNND1-208ENST00000428599 NIT1Q86X76 327 aa7.4□□□□□ -1.23
CTNND1-208ENST00000428599 GZMBP10144 247 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 TPTE2P1Q5T6R2 138 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 PLEKHB2Q96CS7 222 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 NHP2Q9NX24 153 aaKnown RBP7.39□□□□□ -1.23
CTNND1-208ENST00000428599 RALGAPA1Q6GYQ0 2036 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-208ENST00000428599 LAGE3Q14657 143 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 ZNF525Q8N782 197 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 WBP1Q96G27 269 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 LHBP01229 141 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 ATP5L2Q7Z4Y8 100 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 RNF5Q99942 180 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 ERG28Q9UKR5 140 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 TCF20Q9UGU0 1960 aaKnown RBP7.39□□□□□ -1.23
CTNND1-208ENST00000428599 FAM223BA6NKX1 122 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 FAM223AQ8IWN6 122 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 ST6GALNAC3Q8NDV1 305 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 A0A1W2PRE2 83 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 M0R1W7 72 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 CGB7P0DN87 165 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 C9orf139Q6ZV77 190 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 DMRT1Q9Y5R6 373 aa7.39□□□□□ -1.23
CTNND1-208ENST00000428599 A0A1B0GV90 55 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 LINC01559Q495D7 138 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 CD300EQ496F6 205 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-208ENST00000428599 ZNF562Q6V9R5 426 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 PRDM13Q9H4Q3 707 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 SMPXQ9UHP9 88 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 ALPK2Q86TB3 2170 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 RIF1Q5UIP0 2472 aaKnown RBP7.38□□□□□ -1.23
CTNND1-208ENST00000428599 TNFSF13O75888 250 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 PYYP10082 97 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 PSG1P11464 419 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 RASL11AQ6T310 242 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 FAM19A2Q8N3H0 131 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 RNASE7Q9H1E1 156 aaKnown RBP7.38□□□□□ -1.23
CTNND1-208ENST00000428599 KLF12Q9Y4X4 402 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 IGLV3-32A0A0A0MS00 114 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 FXYD7P58549 80 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 BRD3OSQ6XYD6 125 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 RMI2Q96E14 147 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 UBE2E2Q96LR5 201 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 PLXNA3P51805 1871 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 H3BUT2 72 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 ZNF561-AS1K7EIQ3 104 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 HIST1H4AP62805 103 aaKnown RBP7.38□□□□□ -1.23
CTNND1-208ENST00000428599 SP5Q6BEB4 398 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-208ENST00000428599 SFTA2Q6UW10 78 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 ORAOV1Q8WV07 137 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 DERL1Q9BUN8 251 aa7.38□□□□□ -1.23
CTNND1-208ENST00000428599 LEPROTO15243 131 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 IGHV1-8P0DP01 117 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 TMEM126AQ9H061 195 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 CLDN16Q9Y5I7 305 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 TRAV9-2A0A087WT02 112 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 A8MWV9 139 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 PSPNO60542 156 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 DEFB130BP0DP73 79 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 DEFB130AP0DP74 79 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 DLX4Q92988 240 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-208ENST00000428599 LINC00477Q96M19 166 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 MCRIP2Q9BUT9 160 aaKnown RBP7.37□□□□□ -1.23
CTNND1-208ENST00000428599 SRRM4A7MD48 611 aaKnown RBP7.37□□□□□ -1.23
CTNND1-208ENST00000428599 NDUFS8O00217 210 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 SRP19P09132 144 aaKnown RBP7.37□□□□□ -1.23
CTNND1-208ENST00000428599 NPC2P61916 151 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 KLRD1Q13241 179 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 LCN12Q6JVE5 192 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 DNAJC30Q96LL9 226 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 OSTCQ9NRP0 149 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 IGHV1-3A0A0C4DH29 117 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 DAD1P61803 113 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 SELENOKQ9Y6D0 94 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 ITGB1BP1O14713 200 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 RPL15P61313 204 aaKnown RBP7.37□□□□□ -1.23
CTNND1-208ENST00000428599 C1orf159Q96HA4 380 aa7.37□□□□□ -1.23
CTNND1-208ENST00000428599 RTBDNQ9BSG5 229 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-208ENST00000428599 IGKV2-40A0A087WW87 121 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-208ENST00000428599 NPIPB5A8MRT5 1133 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 MLNRO43193 412 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 IGKV2D-40P01614 121 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms