RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 VAMP2P63027 116 aa13.61□□□□□ -0.23
ECHDC3-202ENST00000420401 PAFAH1B2P68402 229 aa13.61□□□□□ -0.23
ECHDC3-202ENST00000420401 TCF24Q7RTU0 167 aa13.61□□□□□ -0.23
ECHDC3-202ENST00000420401 SBSPONQ8IVN8 264 aa13.61□□□□□ -0.23
ECHDC3-202ENST00000420401 DEFB125Q8N687 156 aa13.61□□□□□ -0.23
ECHDC3-202ENST00000420401 OR51G1Q8NGK1 321 aa13.61□□□□□ -0.23
ECHDC3-202ENST00000420401 RCL1Q9Y2P8 373 aaKnown RBP13.61□□□□□ -0.23
ECHDC3-202ENST00000420401 HNRNPCP07910 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
ECHDC3-202ENST00000420401 CMC4P56277 68 aaPredicted RBP13.6□□□□□ -0.23
ECHDC3-202ENST00000420401 RPL11P62913 178 aaKnown RBP13.6□□□□□ -0.23
ECHDC3-202ENST00000420401 FAM90A2PQ658T7 463 aa13.6□□□□□ -0.23
ECHDC3-202ENST00000420401 OR8G2PQ6IF36 304 aa13.6□□□□□ -0.23
ECHDC3-202ENST00000420401 TMEM14EPQ6UXP3 125 aa13.6□□□□□ -0.23
ECHDC3-202ENST00000420401 THAP8Q8NA92 274 aa13.6□□□□□ -0.23
ECHDC3-202ENST00000420401 TRGV9Q99603 122 aa13.6□□□□□ -0.23
ECHDC3-202ENST00000420401 PFDN2Q9UHV9 154 aa13.6□□□□□ -0.23
ECHDC3-202ENST00000420401 LSM5Q9Y4Y9 91 aaKnown RBP13.6□□□□□ -0.23
ECHDC3-202ENST00000420401 BIRC6Q9NR09 4857 aa13.6□□□□□ -0.23
ECHDC3-202ENST00000420401 IGKV1D-37A0A075B6S9 117 aa13.59□□□□□ -0.23
ECHDC3-202ENST00000420401 C7orf66A4D0T2 115 aa13.59□□□□□ -0.23
ECHDC3-202ENST00000420401 DFFBO76075 338 aa13.59□□□□□ -0.23
ECHDC3-202ENST00000420401 PVALBP20472 110 aaPredicted RBP13.59□□□□□ -0.23
ECHDC3-202ENST00000420401 ZNF90Q03938 601 aa13.59□□□□□ -0.23
ECHDC3-202ENST00000420401 AKR1C1Q04828 323 aa13.59□□□□□ -0.23
ECHDC3-202ENST00000420401 ACOT7LQ6ZUV0 252 aa13.59□□□□□ -0.23
ECHDC3-202ENST00000420401 LILRB2Q8N423 598 aa13.59□□□□□ -0.23
ECHDC3-202ENST00000420401 ZMAT4Q9H898 229 aa13.59□□□□□ -0.23
ECHDC3-202ENST00000420401 SRD5A3Q9H8P0 318 aa13.59□□□□□ -0.23
ECHDC3-202ENST00000420401 RABAC1Q9UI14 185 aa13.59□□□□□ -0.23
ECHDC3-202ENST00000420401 IGKV3-7A0A075B6H7 116 aa13.58□□□□□ -0.24
ECHDC3-202ENST00000420401 K7EPK0 472 aa13.58□□□□□ -0.24
ECHDC3-202ENST00000420401 CFDP00746 253 aaPredicted RBP13.58□□□□□ -0.24
ECHDC3-202ENST00000420401 METTL15P1P0C7V9 234 aa13.58□□□□□ -0.24
ECHDC3-202ENST00000420401 LYL1P12980 280 aa13.58□□□□□ -0.24
ECHDC3-202ENST00000420401 P2RY1P47900 373 aa13.58□□□□□ -0.24
ECHDC3-202ENST00000420401 EIF2B2P49770 351 aaKnown RBP13.58□□□□□ -0.24
ECHDC3-202ENST00000420401 USF2Q15853 346 aaPredicted RBP13.58□□□□□ -0.24
ECHDC3-202ENST00000420401 OR10P1Q8NGE3 313 aa13.58□□□□□ -0.24
ECHDC3-202ENST00000420401 RNF125Q96EQ8 232 aa13.58□□□□□ -0.24
ECHDC3-202ENST00000420401 WFDC10AQ9H1F0 79 aa13.58□□□□□ -0.24
ECHDC3-202ENST00000420401 U3KQE9 123 aa13.58□□□□□ -0.24
ECHDC3-202ENST00000420401 DNAH7Q8WXX0 4024 aa13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 SMCO3A2RU48 225 aa13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 PMS2P5A8MQ11 134 aa13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 DNASE2O00115 360 aaPredicted RBP13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 NUP62P37198 522 aaPredicted RBP13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 TFPI2P48307 235 aa13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 BCAP31P51572 246 aa13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 S100A10P60903 97 aa13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 TMEM144Q7Z5S9 345 aa13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 GBGT1Q8N5D6 347 aa13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 FAM110AQ9BQ89 295 aa13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 PBDC1Q9BVG4 233 aa13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 MS4A6AQ9H2W1 248 aa13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 MGAT4CQ9UBM8 478 aa13.57□□□□□ -0.24
ECHDC3-202ENST00000420401 IGKV1OR2-108A0A075B7D4 117 aa13.56□□□□□ -0.24
ECHDC3-202ENST00000420401 TRAV2A0A0B4J234 112 aa13.56□□□□□ -0.24
ECHDC3-202ENST00000420401 LCE6AA0A183 80 aa13.56□□□□□ -0.24
ECHDC3-202ENST00000420401 HELTA6NFD8 242 aa13.56□□□□□ -0.24
ECHDC3-202ENST00000420401 GOSR2O14653 212 aa13.56□□□□□ -0.24
ECHDC3-202ENST00000420401 AP2S1P53680 142 aaPredicted RBP13.56□□□□□ -0.24
ECHDC3-202ENST00000420401 DLK1P80370 383 aa13.56□□□□□ -0.24
ECHDC3-202ENST00000420401 IL15RAQ13261 267 aa13.56□□□□□ -0.24
ECHDC3-202ENST00000420401 OR2F1Q13607 317 aa13.56□□□□□ -0.24
ECHDC3-202ENST00000420401 HAGHQ16775 308 aa13.56□□□□□ -0.24
ECHDC3-202ENST00000420401 LINC00322Q6ZN03 302 aaPredicted RBP13.56□□□□□ -0.24
ECHDC3-202ENST00000420401 UBQLN2Q9UHD9 624 aa13.56□□□□□ -0.24
ECHDC3-202ENST00000420401 RBMY1BA6NDE4 496 aaKnown RBP13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 RBMY1EA6NEQ0 496 aaKnown RBP13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 FNDC10F2Z333 226 aa13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 SSNA1O43805 119 aa13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 PTTG1O95997 202 aa13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 RBMY1DP0C7P1 496 aaKnown RBP13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 CAV2P51636 162 aa13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 LYZP61626 148 aa13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 RRAS2P62070 204 aaPredicted RBP13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 C16orf54Q6UWD8 224 aa13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 WFDC3Q8IUB2 231 aa13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 RCHY1Q96PM5 261 aa13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 GGACTQ9BVM4 153 aa13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 NPVFQ9HCQ7 196 aa13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 SACSQ9NZJ4 4579 aa13.55□□□□□ -0.24
ECHDC3-202ENST00000420401 BUB3O43684 328 aa13.54□□□□□ -0.24
ECHDC3-202ENST00000420401 DEDDO75618 318 aa13.54□□□□□ -0.24
ECHDC3-202ENST00000420401 CCNKO75909 580 aa13.54□□□□□ -0.24
ECHDC3-202ENST00000420401 CYCSP99999 105 aaKnown RBP13.54□□□□□ -0.24
ECHDC3-202ENST00000420401 RAB32Q13637 225 aa13.54□□□□□ -0.24
ECHDC3-202ENST00000420401 ODF3L2Q3SX64 289 aa13.54□□□□□ -0.24
ECHDC3-202ENST00000420401 BPIFCQ8NFQ6 507 aa13.54□□□□□ -0.24
ECHDC3-202ENST00000420401 TM2D3Q9BRN9 247 aa13.54□□□□□ -0.24
ECHDC3-202ENST00000420401 NMES1Q9C002 83 aa13.54□□□□□ -0.24
ECHDC3-202ENST00000420401 HUWE1Q7Z6Z7 4374 aaKnown RBP13.53□□□□□ -0.24
ECHDC3-202ENST00000420401 LOC102724200A0A096LPH7 203 aaPredicted RBP13.53□□□□□ -0.24
ECHDC3-202ENST00000420401 SIX6O95475 246 aa13.53□□□□□ -0.24
ECHDC3-202ENST00000420401 RLN2P04090 185 aa13.53□□□□□ -0.24
ECHDC3-202ENST00000420401 S100A7P31151 101 aa13.53□□□□□ -0.24
ECHDC3-202ENST00000420401 STXBP6Q8NFX7 210 aa13.53□□□□□ -0.24
ECHDC3-202ENST00000420401 SPATA25Q9BR10 227 aa13.53□□□□□ -0.24
ECHDC3-202ENST00000420401 GGTLC1Q9BX51 225 aa13.53□□□□□ -0.24
ECHDC3-202ENST00000420401 TEPPQ6URK8 271 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms