RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 STPG4Q8N801 248 aa10.36□□□□□ -0.75
LINC00642-201ENST00000419459 ZDHHC16Q969W1 377 aa10.36□□□□□ -0.75
LINC00642-201ENST00000419459 EAF1Q96JC9 268 aaPredicted RBP10.36□□□□□ -0.75
LINC00642-201ENST00000419459 OR2D2Q9H210 308 aa10.36□□□□□ -0.75
LINC00642-201ENST00000419459 HIF1ANQ9NWT6 349 aa10.36□□□□□ -0.75
LINC00642-201ENST00000419459 PSG11Q9UQ72 335 aa10.36□□□□□ -0.75
LINC00642-201ENST00000419459 A0A1W2PRD5 423 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 A0A1W2PRF3 423 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 A0A1W2PRM7 423 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 C17orf98A8MV24 154 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 B4DSR2 109 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 TGFAP01135 160 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 HLA-DQA1P01909 254 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 COX7A1P24310 79 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 UBE2V1Q13404 147 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 Q6ZN92 141 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 ZNF738Q8NE65 137 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 HSD17B10Q99714 261 aaKnown RBP10.35□□□□□ -0.75
LINC00642-201ENST00000419459 LINC00574Q9H8X3 128 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 SLC35D1Q9NTN3 355 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 V9GYV3 84 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 MAST4O15021 2626 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 MTORP42345 2549 aa10.35□□□□□ -0.75
LINC00642-201ENST00000419459 K7EN84 100 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 ZNF324O75467 553 aaPredicted RBP10.34□□□□□ -0.75
LINC00642-201ENST00000419459 DEFA4P12838 97 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 RPL30P62888 115 aaKnown RBP10.34□□□□□ -0.75
LINC00642-201ENST00000419459 VMO1Q7Z5L0 202 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 OR52E5Q8NH55 327 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 FAM216AQ8WUB2 273 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 OSTCQ9NRP0 149 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 BET1LQ9NYM9 111 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 JPT1Q9UK76 154 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 RBMXL2O75526 392 aaKnown RBP10.34□□□□□ -0.75
LINC00642-201ENST00000419459 IGHV4-31P0DP07 118 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 GCHFRP30047 84 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 LINC00205P59089 165 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 RHOBP62745 196 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 GCSAMLQ5JQS6 135 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 TREML4Q6UXN2 200 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 GGTLC1Q9BX51 225 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 MRPL27Q9P0M9 148 aaKnown RBP10.34□□□□□ -0.75
LINC00642-201ENST00000419459 NAT8BQ9UHF3 227 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 INSIG2Q9Y5U4 225 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 COX11Q9Y6N1 276 aa10.34□□□□□ -0.75
LINC00642-201ENST00000419459 A0A1W2PN81 502 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 A0A1W2PS18 150 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 CCL25O15444 150 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 TOX4O94842 621 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 THBS3P49746 956 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 RPS20P60866 119 aaKnown RBP10.33□□□□□ -0.76
LINC00642-201ENST00000419459 CT45A1Q5HYN5 189 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 CT45A3Q8NHU0 189 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 TMEM186Q96B77 213 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 SIRPDQ9H106 197 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 TMEM133Q9H2Q1 129 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 IGHV3OR16-10A0A075B7F0 116 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 IGHV2-26A0A0B4J1V2 119 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 F2Z2F3 143 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 SLC17A3O00476 420 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 AVPP01185 164 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 BRWD1-AS2P59051 145 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 RASL11AQ6T310 242 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 TMEM136Q6ZRR5 245 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 C1orf229Q6ZS94 237 aaPredicted RBP10.33□□□□□ -0.76
LINC00642-201ENST00000419459 ABHD12Q8N2K0 398 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 LINC01356Q8N9X3 169 aa10.33□□□□□ -0.76
LINC00642-201ENST00000419459 GSX1Q9H4S2 264 aaPredicted RBP10.33□□□□□ -0.76
LINC00642-201ENST00000419459 YTHDF2Q9Y5A9 579 aaKnown RBP10.33□□□□□ -0.76
LINC00642-201ENST00000419459 PRSS46E5RG02 174 aa10.32□□□□□ -0.76
LINC00642-201ENST00000419459 AMY1AP04745 511 aa10.32□□□□□ -0.76
LINC00642-201ENST00000419459 TSPOP30536 169 aa10.32□□□□□ -0.76
LINC00642-201ENST00000419459 DIAPH2-AS1Q14236 149 aa10.32□□□□□ -0.76
LINC00642-201ENST00000419459 OR8I2Q8N0Y5 310 aa10.32□□□□□ -0.76
LINC00642-201ENST00000419459 ZNF439Q8NDP4 499 aa10.32□□□□□ -0.76
LINC00642-201ENST00000419459 TNFRSF14Q92956 283 aa10.32□□□□□ -0.76
LINC00642-201ENST00000419459 BORCS7Q96B45 105 aa10.32□□□□□ -0.76
LINC00642-201ENST00000419459 C5orf30Q96GV9 206 aa10.32□□□□□ -0.76
LINC00642-201ENST00000419459 MGST2Q99735 147 aa10.32□□□□□ -0.76
LINC00642-201ENST00000419459 FAM103A1Q9BTL3 118 aaKnown RBP10.32□□□□□ -0.76
LINC00642-201ENST00000419459 IFI27L2Q9H2X8 130 aa10.32□□□□□ -0.76
LINC00642-201ENST00000419459 C7orf69Q9H7B7 122 aa10.32□□□□□ -0.76
LINC00642-201ENST00000419459 RNF114Q9Y508 228 aa10.32□□□□□ -0.76
LINC00642-201ENST00000419459 ANK3Q12955 4377 aaKnown RBP10.32□□□□□ -0.76
LINC00642-201ENST00000419459 M0R1W7 72 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 C3orf79P0CE67 100 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 HOXB4P17483 251 aaPredicted RBP10.31□□□□□ -0.76
LINC00642-201ENST00000419459 REG1BP48304 166 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 GNG4P50150 75 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 RPL39P5Q59GN2 51 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 HCP5Q6MZN7 132 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 LYG1Q8N1E2 194 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 OR4P4Q8NGL7 312 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 RNASE8Q8TDE3 154 aaKnown RBP10.31□□□□□ -0.76
LINC00642-201ENST00000419459 SMR3AQ99954 134 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 NPVFQ9HCQ7 196 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 RAB9BQ9NP90 201 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 LSM4Q9Y4Z0 139 aaKnown RBP10.31□□□□□ -0.76
LINC00642-201ENST00000419459 TRAV40A0A0B4J280 105 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 ISLRO14498 428 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms