RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 LSM5Q9Y4Y9 91 aaKnown RBP13.47□□□□□ -0.25
SEMA3B-201ENST00000416295 IGHV3-66A0A0C4DH42 116 aa13.46□□□□□ -0.25
SEMA3B-201ENST00000416295 C7orf66A4D0T2 115 aa13.46□□□□□ -0.25
SEMA3B-201ENST00000416295 K7EPK0 472 aa13.46□□□□□ -0.25
SEMA3B-201ENST00000416295 PVALBP20472 110 aaPredicted RBP13.46□□□□□ -0.25
SEMA3B-201ENST00000416295 EIF2B2P49770 351 aaKnown RBP13.46□□□□□ -0.25
SEMA3B-201ENST00000416295 ZNF90Q03938 601 aa13.46□□□□□ -0.25
SEMA3B-201ENST00000416295 USF2Q15853 346 aaPredicted RBP13.46□□□□□ -0.25
SEMA3B-201ENST00000416295 RNF125Q96EQ8 232 aa13.46□□□□□ -0.25
SEMA3B-201ENST00000416295 FAM110AQ9BQ89 295 aa13.46□□□□□ -0.25
SEMA3B-201ENST00000416295 WFDC10AQ9H1F0 79 aa13.46□□□□□ -0.25
SEMA3B-201ENST00000416295 SRD5A3Q9H8P0 318 aa13.46□□□□□ -0.25
SEMA3B-201ENST00000416295 PFDN2Q9UHV9 154 aa13.46□□□□□ -0.25
SEMA3B-201ENST00000416295 RABAC1Q9UI14 185 aa13.46□□□□□ -0.25
SEMA3B-201ENST00000416295 PMS2P5A8MQ11 134 aa13.45□□□□□ -0.26
SEMA3B-201ENST00000416295 DFFBO76075 338 aa13.45□□□□□ -0.26
SEMA3B-201ENST00000416295 METTL15P1P0C7V9 234 aa13.45□□□□□ -0.26
SEMA3B-201ENST00000416295 NUP62P37198 522 aaPredicted RBP13.45□□□□□ -0.26
SEMA3B-201ENST00000416295 P2RY1P47900 373 aa13.45□□□□□ -0.26
SEMA3B-201ENST00000416295 RPL11P62913 178 aaKnown RBP13.45□□□□□ -0.26
SEMA3B-201ENST00000416295 OR10P1Q8NGE3 313 aa13.45□□□□□ -0.26
SEMA3B-201ENST00000416295 U3KQE9 123 aa13.45□□□□□ -0.26
SEMA3B-201ENST00000416295 IGKV3-7A0A075B6H7 116 aa13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 IGKV1OR2-108A0A075B7D4 117 aa13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 SMCO3A2RU48 225 aa13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 FNDC10F2Z333 226 aa13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 GOSR2O14653 212 aa13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 PTTG1O95997 202 aa13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 CFDP00746 253 aaPredicted RBP13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 CMC4P56277 68 aaPredicted RBP13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 S100A10P60903 97 aa13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 DLK1P80370 383 aa13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 TMEM144Q7Z5S9 345 aa13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 LILRB2Q8N423 598 aa13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 PBDC1Q9BVG4 233 aa13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 ZMAT4Q9H898 229 aa13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 U3KQK5 164 aa13.44□□□□□ -0.26
SEMA3B-201ENST00000416295 TRAV2A0A0B4J234 112 aa13.43□□□□□ -0.26
SEMA3B-201ENST00000416295 HELTA6NFD8 242 aa13.43□□□□□ -0.26
SEMA3B-201ENST00000416295 DNASE2O00115 360 aaPredicted RBP13.43□□□□□ -0.26
SEMA3B-201ENST00000416295 TFPI2P48307 235 aa13.43□□□□□ -0.26
SEMA3B-201ENST00000416295 BCAP31P51572 246 aa13.43□□□□□ -0.26
SEMA3B-201ENST00000416295 CAV2P51636 162 aa13.43□□□□□ -0.26
SEMA3B-201ENST00000416295 IL15RAQ13261 267 aa13.43□□□□□ -0.26
SEMA3B-201ENST00000416295 WWC2-AS2Q96NR7 200 aa13.43□□□□□ -0.26
SEMA3B-201ENST00000416295 MS4A6AQ9H2W1 248 aa13.43□□□□□ -0.26
SEMA3B-201ENST00000416295 MGAT4CQ9UBM8 478 aa13.43□□□□□ -0.26
SEMA3B-201ENST00000416295 SSNA1O43805 119 aa13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 CCNKO75909 580 aa13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 LYZP61626 148 aa13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 RRAS2P62070 204 aaPredicted RBP13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 CYCSP99999 105 aaKnown RBP13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 OR2F1Q13607 317 aa13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 RAB32Q13637 225 aa13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 HAGHQ16775 308 aa13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 ODF3L2Q3SX64 289 aa13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 C16orf54Q6UWD8 224 aa13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 LINC00322Q6ZN03 302 aaPredicted RBP13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 GBGT1Q8N5D6 347 aa13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 TM2D3Q9BRN9 247 aa13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 GGACTQ9BVM4 153 aa13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 UBQLN2Q9UHD9 624 aa13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 TENM3Q9P273 2699 aa13.42□□□□□ -0.26
SEMA3B-201ENST00000416295 RBMY1BA6NDE4 496 aaKnown RBP13.41□□□□□ -0.26
SEMA3B-201ENST00000416295 RBMY1EA6NEQ0 496 aaKnown RBP13.41□□□□□ -0.26
SEMA3B-201ENST00000416295 BUB3O43684 328 aa13.41□□□□□ -0.26
SEMA3B-201ENST00000416295 RBMY1DP0C7P1 496 aaKnown RBP13.41□□□□□ -0.26
SEMA3B-201ENST00000416295 AP2S1P53680 142 aaPredicted RBP13.41□□□□□ -0.26
SEMA3B-201ENST00000416295 BPIFCQ8NFQ6 507 aa13.41□□□□□ -0.26
SEMA3B-201ENST00000416295 GLMPQ8WWB7 406 aa13.41□□□□□ -0.26
SEMA3B-201ENST00000416295 NMES1Q9C002 83 aa13.41□□□□□ -0.26
SEMA3B-201ENST00000416295 C11orf1Q9H5F2 150 aa13.41□□□□□ -0.26
SEMA3B-201ENST00000416295 NPVFQ9HCQ7 196 aa13.41□□□□□ -0.26
SEMA3B-201ENST00000416295 STXBP6Q8NFX7 210 aa13.4□□□□□ -0.26
SEMA3B-201ENST00000416295 SPATA25Q9BR10 227 aa13.4□□□□□ -0.26
SEMA3B-201ENST00000416295 LYRM2Q9NU23 88 aaPredicted RBP13.4□□□□□ -0.26
SEMA3B-201ENST00000416295 LOC102724200A0A096LPH7 203 aaPredicted RBP13.39□□□□□ -0.27
SEMA3B-201ENST00000416295 DEDDO75618 318 aa13.39□□□□□ -0.27
SEMA3B-201ENST00000416295 SIX6O95475 246 aa13.39□□□□□ -0.27
SEMA3B-201ENST00000416295 RLN2P04090 185 aa13.39□□□□□ -0.27
SEMA3B-201ENST00000416295 S100A7P31151 101 aa13.39□□□□□ -0.27
SEMA3B-201ENST00000416295 SELENOTP62341 195 aa13.39□□□□□ -0.27
SEMA3B-201ENST00000416295 TEPPQ6URK8 271 aa13.39□□□□□ -0.27
SEMA3B-201ENST00000416295 CYP2G1PQ6ZSU1 146 aa13.39□□□□□ -0.27
SEMA3B-201ENST00000416295 WFDC3Q8IUB2 231 aa13.39□□□□□ -0.27
SEMA3B-201ENST00000416295 PPP1R14BQ96C90 147 aa13.39□□□□□ -0.27
SEMA3B-201ENST00000416295 RCHY1Q96PM5 261 aa13.39□□□□□ -0.27
SEMA3B-201ENST00000416295 GGTLC1Q9BX51 225 aa13.39□□□□□ -0.27
SEMA3B-201ENST00000416295 SLC45A2Q9UMX9 530 aa13.39□□□□□ -0.27
SEMA3B-201ENST00000416295 DNAH9Q9NYC9 4486 aa13.38□□□□□ -0.27
SEMA3B-201ENST00000416295 SLC38A11Q08AI6 406 aa13.38□□□□□ -0.27
SEMA3B-201ENST00000416295 ARL16Q0P5N6 197 aa13.38□□□□□ -0.27
SEMA3B-201ENST00000416295 C1orf194Q5T5A4 169 aa13.38□□□□□ -0.27
SEMA3B-201ENST00000416295 SIGLEC15Q6ZMC9 328 aa13.38□□□□□ -0.27
SEMA3B-201ENST00000416295 STX12Q86Y82 276 aa13.38□□□□□ -0.27
SEMA3B-201ENST00000416295 CITED4Q96RK1 184 aa13.38□□□□□ -0.27
SEMA3B-201ENST00000416295 MAP6D1Q9H9H5 199 aa13.38□□□□□ -0.27
SEMA3B-201ENST00000416295 FBXL17Q9UF56 701 aa13.38□□□□□ -0.27
SEMA3B-201ENST00000416295 FAM24AA6NFZ4 105 aa13.37□□□□□ -0.27
SEMA3B-201ENST00000416295 K7EQG2 157 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms