RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 EXPH5Q8NEV8 1989 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 DOCK3Q8IZD9 2030 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 NAV3Q8IVL0 2385 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 ASCC3Q8N3C0 2202 aaKnown RBP0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 A0A087WX48 190 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 A0A087X0T9 212 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 ZNF736B4DX44 427 aaPredicted RBP0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 PIRO00625 290 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 CCL16O15467 120 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 SULT1B1O43704 296 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 HYPMO75409 117 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR7C1O76099 320 aaPredicted RBP0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 IFNA10P01566 189 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 IFNA6P05013 189 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 C8GP07360 202 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 CST2P09228 141 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 RBP1P09455 135 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 BAALC-AS2P0C853 105 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 PPIBP23284 216 aaKnown RBP0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 INSL3P51460 131 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 PIGPP57054 158 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 AP3S2P59780 193 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 HIST1H3AP68431 136 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 H3F3AP84243 136 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 TAF1AQ15573 450 aaPredicted RBP0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 TSNQ15631 228 aaKnown RBP0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 AKIRIN2Q53H80 203 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 C1orf134Q5TEV5 83 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 GDF5OSQ5U4N7 250 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 TEX261Q6UWH6 196 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 PATE2Q6UY27 113 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 RPS19BP1Q86WX3 136 aaKnown RBP0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR10X1Q8NGY0 326 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 MCFD2Q8NI22 146 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 PATE1Q8WXA2 126 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 BORCS7Q96B45 105 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 PPP1R14BQ96C90 147 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 C2orf50Q96LR7 162 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 HIST1H2BLQ99880 126 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 PRADC1Q9BSG0 188 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 COMMD5Q9GZQ3 224 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 CCDC90BQ9GZT6 254 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 RNF122Q9H9V4 155 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 PARVBQ9HBI1 364 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 ACER3Q9NUN7 267 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 TAS2R7Q9NYW3 318 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 TVP23BQ9NYZ1 205 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 OPTCQ9UBM4 332 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 KLK9Q9UKQ9 250 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 SNURFQ9Y675 71 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 U3KQ87 197 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 MAST4O15021 2626 aa0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 MACF1Q9UPN3 7388 aaKnown RBP0.08□□□□□ -2.4
TRAPPC13-203ENST00000415825 RFX7Q2KHR2 1363 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 PCF11O94913 1555 aaKnown RBP0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 MED1Q15648 1581 aaPredicted RBP0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 SNRNP200O75643 2136 aaKnown RBP0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 NCOA1Q15788 1441 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 RIC1Q4ADV7 1423 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 ADGRL3Q9HAR2 1447 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 TRBV19A0A075B6N1 114 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 IGKV2D-26A0A0A0MRZ7 120 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 TRBV6-4A0A1B0GX49 114 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 CCDC160A6NGH7 325 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 TMEM256-PLSCR3K7ERE1 68 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 TAX1BP3O14907 124 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 CYB5BO43169 146 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR2B3O76000 313 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 DHFRP00374 187 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 SERPINA1P01009 418 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 PRH1P02810 166 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 CRHP06850 196 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 HSD11B1P28845 292 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 CASP1P29466 404 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 EFNA4P52798 201 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 YPEL3P61236 119 aaPredicted RBP0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 FADDQ13158 208 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 RRN3P1Q2M238 152 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 SPANXN5Q5MJ07 72 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 ZNF833PQ6ZTB9 187 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 GRINAQ7Z429 371 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 TRAPPC6BQ86SZ2 158 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 KRT222Q8N1A0 295 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 LINC00471Q8N535 108 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 SLC30A7Q8NEW0 376 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR2T35Q8NGX2 323 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR10K1Q8NGX5 313 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 LINC00526Q96FQ7 95 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 C9orf16Q9BUW7 83 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 TRIM4Q9C037 500 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 TAF9BQ9HBM6 251 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 ARMC1Q9NVT9 282 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 MED29Q9NX70 200 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 PRNDQ9UKY0 176 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 SLC35A3Q9Y2D2 325 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 ZDBF2Q9HCK1 2354 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 CCDC88AQ3V6T2 1871 aa0.07□□□□□ -2.4
TRAPPC13-203ENST00000415825 MUC4Q99102 2169 aa0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 TNRC6BQ9UPQ9 1833 aaKnown RBP0.06□□□□□ -2.4
TRAPPC13-203ENST00000415825 RIMBP3CA6NJZ7 1639 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms