RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 TMEM144Q7Z5S9 345 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 PXT1Q8NFP0 134 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 OR5AK2Q8NH90 309 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 OTOSQ8NHW6 89 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 PHB2Q99623 299 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 EMC6Q9BV81 110 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 NOX3Q9HBY0 568 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 PROK2Q9HC23 129 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 DAZ3Q9NR90 486 aaKnown RBP1.79□□□□□ -2.12
MCF2-204ENST00000414978 C19orf12Q9NSK7 152 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 IDI2-AS1Q9NZ38 188 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 GLS2Q9UI32 602 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 HECTD4Q9Y4D8 3996 aa1.79□□□□□ -2.12
MCF2-204ENST00000414978 HIVEP2P31629 2446 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 TRAV8-2A0A0B4J237 113 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 FAM168BA1KXE4 195 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 PLAC8L1A1L4L8 177 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 TMEM212A6NML5 194 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 PEX7O00628 323 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 SSNA1O43805 119 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 MT-ND4P03905 459 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 SCGB1C2P0DMR2 95 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 RPS27P42677 84 aaKnown RBP1.78□□□□□ -2.12
MCF2-204ENST00000414978 PPP3R1P63098 170 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 SPINK14Q6IE38 97 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 TMEM91Q6ZNR0 172 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 SLC26A10Q8NG04 563 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 SCGB1C1Q8TD33 95 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 ACOT12Q8WYK0 555 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 SLC25A44Q96H78 314 aaPredicted RBP1.78□□□□□ -2.12
MCF2-204ENST00000414978 DIRAS2Q96HU8 199 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 LINC00477Q96M19 166 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 DERL3Q96Q80 235 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 OR2M2Q96R28 347 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 GGTLC1Q9BX51 225 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 TTTY12Q9BZ98 90 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 COMMD3Q9UBI1 195 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 DNAH9Q9NYC9 4486 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 IGHV3-15A0A0B4J1V0 119 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 TRAV39A0A0B4J263 110 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 A0A0J9YW62 118 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 LOC102725191A0A1B0GVB3 256 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 FAM25AB3EWG3 89 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 FAM25CB3EWG5 89 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 FAM25GB3EWG6 89 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 PDCD5O14737 125 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 PIN1P1O15428 100 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 UPK1BO75841 260 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 TRBV12-3P01733 135 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 PFN1P07737 140 aaKnown RBP1.78□□□□□ -2.12
MCF2-204ENST00000414978 HTR1DP28221 377 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 CAV3P56539 151 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 RAB5BP61020 215 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 IFITM2Q01629 132 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 ZNF79Q15937 498 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 ZNF239Q16600 458 aaKnown RBP1.78□□□□□ -2.12
MCF2-204ENST00000414978 ZNF181Q2M3W8 571 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 HSD17B12Q53GQ0 312 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 RSBN1Q5VWQ0 802 aaPredicted RBP1.78□□□□□ -2.12
MCF2-204ENST00000414978 OTPQ5XKR4 325 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 FAM131AQ6UXB0 335 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 LRRN1Q6UXK5 716 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 FA2HQ7L5A8 372 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 CYB561D1Q8N8Q1 229 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 OR2D3Q8NGH3 330 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 ZNF418Q8TF45 676 aaPredicted RBP1.78□□□□□ -2.12
MCF2-204ENST00000414978 NRIP2Q9BQI9 281 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 PAXXQ9BUH6 204 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 CCDC32Q9BV29 185 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 PRO0628Q9UI54 55 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
MCF2-204ENST00000414978 FREM3P0C091 2139 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 LYSTQ99698 3801 aa1.78□□□□□ -2.12
MCF2-204ENST00000414978 TRAV1-2A0A0B4J238 106 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 A0A1B0GVG6 124 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 PINLYPA6NC86 204 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 CGAP01215 116 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 IGLV2-8P01709 118 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 UCHL1P09936 223 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 CXCL2P19875 107 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 IL3RAP26951 378 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 ETV6P41212 452 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 INPP1P49441 399 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 LHX2P50458 406 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 Q499Y3 187 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 PYDC2Q56P42 97 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 TMEM255AQ5JRV8 349 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 TEX30Q5JUR7 227 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 KRTAP7-1Q8IUC3 87 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 ZNF433Q8N7K0 673 aaPredicted RBP1.78□□□□□ -2.13
MCF2-204ENST00000414978 OR10D3Q8NH80 312 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 LINC01006Q8NI28 216 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 C11orf40Q8WZ69 217 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 CCL17Q92583 94 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 GFRA4Q9GZZ7 299 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 MMP26Q9NRE1 261 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 GLTPQ9NZD2 209 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 CKLFQ9UBR5 152 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 RFNGQ9Y644 331 aa1.78□□□□□ -2.13
MCF2-204ENST00000414978 MED12LQ86YW9 2145 aa1.78□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms