RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 CRYGAP11844 174 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 CCL11P51671 97 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 PCOLCEQ15113 449 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 ADAMTSL4Q6UY14 1074 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 STHQ8IWL8 128 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 CEND1Q8N111 149 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 ZCCHC24Q8N2G6 241 aaKnown RBP4.21□□□□□ -1.74
HERC4-205ENST00000412272 ABHD12Q8N2K0 398 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 NHP2Q9NX24 153 aaKnown RBP4.21□□□□□ -1.74
HERC4-205ENST00000412272 HIGD1BQ9P298 99 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 ARHGAP21Q5T5U3 1957 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 LOC101059948A0A1B0GTJ6 334 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 K7EM74 188 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 CDX4O14627 284 aaPredicted RBP4.21□□□□□ -1.74
HERC4-205ENST00000412272 FCGR3BO75015 233 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 ELANEP08246 267 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 PFN2P35080 140 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 SSR4P51571 173 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 PCSK4Q6UW60 755 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 CIARTQ8N365 385 aaPredicted RBP4.21□□□□□ -1.74
HERC4-205ENST00000412272 GJC3Q8NFK1 279 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 PIFOQ8TCI5 191 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 C20orf173Q96LM9 149 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 CYSTM1Q9H1C7 97 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 SAP30LQ9HAJ7 183 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 HHLA3Q9XRX5 114 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 WDFY3Q8IZQ1 3526 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 IGKV1-9A0A0C4DH69 117 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 TCRBV4S1A1TA0A5B7 111 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 FAM90A7PA6NKC0 464 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 FAM90A22PA8MWA6 464 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 FAM90A12PA8MX19 464 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 FAM90A23PA8MXZ1 464 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 SPINK4O60575 86 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 CD7P09564 240 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 FOXA3P55318 350 aaPredicted RBP4.21□□□□□ -1.74
HERC4-205ENST00000412272 EBI3Q14213 229 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 SMRP1Q8NCR6 262 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 OR9G1Q8NH87 305 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 RFESDQ8TAC1 157 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 GPHA2Q96T91 129 aa4.21□□□□□ -1.74
HERC4-205ENST00000412272 TRBV7-7A0A0K0K1E9 115 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 NDUFS7O75251 213 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 NCR2O95944 276 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 HLA-DOBP13765 273 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 CTLA4P16410 223 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 RPS27P42677 84 aaKnown RBP4.2□□□□□ -1.74
HERC4-205ENST00000412272 GDF5OSQ5U4N7 250 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 IGFL2Q6UWQ7 119 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 MARCH3Q86UD3 253 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 PCP2Q8IVA1 136 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 NPIPB3Q92617 1050 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 PMS2P5A8MQ11 134 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 COX5AP20674 150 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 ATP5G3P48201 142 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 PSMG4Q5JS54 123 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 TBC1D26Q86UD7 250 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 RPS19BP1Q86WX3 136 aaKnown RBP4.2□□□□□ -1.74
HERC4-205ENST00000412272 LINC00482Q8N8I6 264 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 C15orf53Q8NAA6 179 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 RND1Q92730 232 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 VKORC1Q9BQB6 163 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 GOLGA4Q13439 2230 aaKnown RBP4.2□□□□□ -1.74
HERC4-205ENST00000412272 K7EMI3 77 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 PPYP01298 95 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 FAM90A15PP0C7V4 464 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 FAM90A14PP0C7W9 464 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 MGST1P10620 155 aaKnown RBP4.2□□□□□ -1.74
HERC4-205ENST00000412272 IGLV3-21P80748 117 aaPredicted RBP4.2□□□□□ -1.74
HERC4-205ENST00000412272 PMVKQ15126 192 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 C12orf74Q32Q52 190 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 GAGE2AQ6NT46 116 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 ANKRD29Q8N6D5 301 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 Q8N7P7 452 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 HEATR5BQ9P2D3 2071 aa4.2□□□□□ -1.74
HERC4-205ENST00000412272 IZUMO1RA6ND01 250 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 FAM90A10PA6NDY2 464 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 K7ESM1 405 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 RTL8BQ17RB0 113 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 KLF17Q5JT82 389 aaPredicted RBP4.19□□□□□ -1.74
HERC4-205ENST00000412272 TMEM200BQ69YZ2 307 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 PLEKHB2Q96CS7 222 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 AP5S1Q9NUS5 200 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 ADAMTS9Q9P2N4 1935 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 CD70P32970 193 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 FOXC1Q12948 553 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 SRSF9Q13242 221 aaKnown RBP eCLIP4.19□□□□□ -1.742e-8■■■□□ 15.1
HERC4-205ENST00000412272 KISS1Q15726 138 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 MORN3Q6PF18 240 aaPredicted RBP4.19□□□□□ -1.74
HERC4-205ENST00000412272 ATP5L2Q7Z4Y8 100 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 VN1R4Q7Z5H5 301 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 LINC01561Q8N1V8 128 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 TMEM147Q9BVK8 224 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 FOXQ1Q9C009 403 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 SLC25A22Q9H936 323 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 F11RQ9Y624 299 aaKnown RBP4.19□□□□□ -1.74
HERC4-205ENST00000412272 TNRC6BQ9UPQ9 1833 aaKnown RBP4.19□□□□□ -1.74
HERC4-205ENST00000412272 ATG2BQ96BY7 2078 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 SYNGR2O43760 224 aa4.19□□□□□ -1.74
HERC4-205ENST00000412272 TMEM258P61165 79 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms