RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 PRR20AP86496 221 aa12.15□□□□□ -0.46
SHANK2-204ENST00000409530 FAM223AQ8IWN6 122 aa12.15□□□□□ -0.46
SHANK2-204ENST00000409530 KLHDC1Q8N7A1 406 aa12.15□□□□□ -0.46
SHANK2-204ENST00000409530 COX7A2P2O60397 106 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 IGHG4P01861 327 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.14□□□□□ -0.47
SHANK2-204ENST00000409530 VN1R17PQ8TDU5 208 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 JMJD8Q96S16 334 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 TRGV9Q99603 122 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 A0A1W2PPV4 95 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 NUPL2O15504 423 aaKnown RBP12.14□□□□□ -0.47
SHANK2-204ENST00000409530 IL4P05112 153 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 H2AFB1P0C5Y9 115 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 RD3LP0DJH9 198 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 PSMB8P28062 276 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 ADMP35318 185 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 CDC34P49427 236 aaPredicted RBP12.14□□□□□ -0.47
SHANK2-204ENST00000409530 FAM78BQ5VT40 261 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 TEX38Q6PEX7 206 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 Q8N2B8 174 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 LINC00052Q96N35 136 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 SEPSECSQ9HD40 501 aaKnown RBP12.14□□□□□ -0.47
SHANK2-204ENST00000409530 PFDN2Q9UHV9 154 aa12.14□□□□□ -0.47
SHANK2-204ENST00000409530 SNRPCP09234 159 aaKnown RBP12.13□□□□□ -0.47
SHANK2-204ENST00000409530 OR4X2Q8NGF9 303 aa12.13□□□□□ -0.47
SHANK2-204ENST00000409530 OR51G1Q8NGK1 321 aa12.13□□□□□ -0.47
SHANK2-204ENST00000409530 MAP1LC3B2A6NCE7 125 aa12.13□□□□□ -0.47
SHANK2-204ENST00000409530 CTSGP08311 255 aa12.13□□□□□ -0.47
SHANK2-204ENST00000409530 ARL3P36405 182 aa12.13□□□□□ -0.47
SHANK2-204ENST00000409530 RAB5CP51148 216 aa12.13□□□□□ -0.47
SHANK2-204ENST00000409530 MORN5Q5VZ52 161 aa12.13□□□□□ -0.47
SHANK2-204ENST00000409530 LEMD1Q68G75 181 aa12.13□□□□□ -0.47
SHANK2-204ENST00000409530 MIR17HGQ75NE6 70 aa12.13□□□□□ -0.47
SHANK2-204ENST00000409530 EIF4E3Q8N5X7 224 aaKnown RBP12.13□□□□□ -0.47
SHANK2-204ENST00000409530 OR5AU1Q8NGC0 362 aa12.13□□□□□ -0.47
SHANK2-204ENST00000409530 RAB24Q969Q5 203 aa12.13□□□□□ -0.47
SHANK2-204ENST00000409530 MAP1LC3BQ9GZQ8 125 aa12.13□□□□□ -0.47
SHANK2-204ENST00000409530 PUS1Q9Y606 427 aaKnown RBP eCLIP12.13□□□□□ -0.47
SHANK2-204ENST00000409530 JMJD1CQ15652 2540 aa12.12□□□□□ -0.47
SHANK2-204ENST00000409530 H3BUA1 57 aa12.12□□□□□ -0.47
SHANK2-204ENST00000409530 MBP02144 154 aa12.12□□□□□ -0.47
SHANK2-204ENST00000409530 BLOC1S1P78537 153 aa12.12□□□□□ -0.47
SHANK2-204ENST00000409530 C18orf65Q6ZTR6 163 aa12.12□□□□□ -0.47
SHANK2-204ENST00000409530 TMEM37Q8WXS4 190 aa12.12□□□□□ -0.47
SHANK2-204ENST00000409530 PRELID1Q9Y255 219 aa12.12□□□□□ -0.47
SHANK2-204ENST00000409530 TRBV7-1A0A0A6YYK4 115 aa12.11□□□□□ -0.47
SHANK2-204ENST00000409530 A0A1W2PRX2 142 aa12.11□□□□□ -0.47
SHANK2-204ENST00000409530 TGOLN2O43493 480 aa12.11□□□□□ -0.47
SHANK2-204ENST00000409530 ZNF207O43670 478 aaKnown RBP12.11□□□□□ -0.47
SHANK2-204ENST00000409530 SELENOTP62341 195 aa12.11□□□□□ -0.47
SHANK2-204ENST00000409530 DEFB136Q30KP8 78 aa12.11□□□□□ -0.47
SHANK2-204ENST00000409530 C10orf113Q5VZT2 155 aa12.11□□□□□ -0.47
SHANK2-204ENST00000409530 LINC01006Q8NI28 216 aa12.11□□□□□ -0.47
SHANK2-204ENST00000409530 ACTR3CQ9C0K3 210 aaPredicted RBP12.11□□□□□ -0.47
SHANK2-204ENST00000409530 TMPRSS5Q9H3S3 457 aa12.11□□□□□ -0.47
SHANK2-204ENST00000409530 TRAV5A0A0B4J249 113 aa12.11□□□□□ -0.47
SHANK2-204ENST00000409530 TSPAN9O75954 239 aa12.11□□□□□ -0.47
SHANK2-204ENST00000409530 CCL20P78556 96 aa12.11□□□□□ -0.47
SHANK2-204ENST00000409530 C20orf24Q9BUV8 137 aa12.11□□□□□ -0.47
SHANK2-204ENST00000409530 TMEM231Q9H6L2 316 aa12.11□□□□□ -0.47
SHANK2-204ENST00000409530 TRAV30A0A087WSZ9 112 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 SCGB2A1O75556 95 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 TOMM40O96008 361 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 PATE2Q6UY27 113 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 LINC00305Q7Z4B0 112 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 RNF125Q96EQ8 232 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 SAT2Q96F10 170 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-204ENST00000409530 USMG5Q96IX5 58 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 IGHV3OR16-13A0A075B7E8 117 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 IGHV3-49A0A0A0MS15 119 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 IGHV3-74A0A0B4J1X5 117 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 A0A0G2JLM5 398 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 CTXND1A0A1B0GTU2 59 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 RHOBP62745 196 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 FOXE3Q13461 319 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 USF2Q15853 346 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-204ENST00000409530 ZNF580Q9UK33 172 aa12.1□□□□□ -0.47
SHANK2-204ENST00000409530 OR7C2O60412 319 aa12.09□□□□□ -0.47
SHANK2-204ENST00000409530 OR2C1O95371 312 aa12.09□□□□□ -0.47
SHANK2-204ENST00000409530 FABP1P07148 127 aa12.09□□□□□ -0.47
SHANK2-204ENST00000409530 ARL14EPLP0DKL9 152 aa12.09□□□□□ -0.47
SHANK2-204ENST00000409530 BTN1A1Q13410 526 aa12.09□□□□□ -0.47
SHANK2-204ENST00000409530 Q8WTZ3 238 aa12.09□□□□□ -0.47
SHANK2-204ENST00000409530 DUX3Q96PT4 197 aa12.09□□□□□ -0.47
SHANK2-204ENST00000409530 TXN2Q99757 166 aa12.09□□□□□ -0.47
SHANK2-204ENST00000409530 SELENOKQ9Y6D0 94 aa12.09□□□□□ -0.47
SHANK2-204ENST00000409530 C2CD3Q4AC94 2353 aa12.09□□□□□ -0.47
SHANK2-204ENST00000409530 IGHV3-66A0A0C4DH42 116 aa12.08□□□□□ -0.47
SHANK2-204ENST00000409530 TSPAN4O14817 238 aa12.08□□□□□ -0.47
SHANK2-204ENST00000409530 HYPMO75409 117 aa12.08□□□□□ -0.47
SHANK2-204ENST00000409530 OR10J4P0C629 311 aa12.08□□□□□ -0.47
SHANK2-204ENST00000409530 TCTEX1D4Q5JR98 221 aa12.08□□□□□ -0.47
SHANK2-204ENST00000409530 DPPA3Q6W0C5 159 aa12.08□□□□□ -0.47
SHANK2-204ENST00000409530 SCRT1Q9BWW7 348 aa12.08□□□□□ -0.47
SHANK2-204ENST00000409530 DNAJC4Q9NNZ3 241 aa12.08□□□□□ -0.47
SHANK2-204ENST00000409530 GNG13Q9P2W3 67 aa12.08□□□□□ -0.47
SHANK2-204ENST00000409530 FUT9Q9Y231 359 aa12.08□□□□□ -0.47
SHANK2-204ENST00000409530 HIGD1AQ9Y241 93 aa12.08□□□□□ -0.47
SHANK2-204ENST00000409530 HSPB1P04792 205 aaKnown RBP12.08□□□□□ -0.48
SHANK2-204ENST00000409530 ELANEP08246 267 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms