RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 LTAP01374 205 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 SLC25A5P05141 298 aaKnown RBP4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 PRCDQ00LT1 54 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 RIGQ13278 110 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 LINC00696Q6ZRV3 163 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 LCNL1Q6ZST4 164 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 SLC25A48Q6ZT89 311 aaKnown RBP4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 BCL6BQ8N143 479 aaPredicted RBP4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 CACNG8Q8WXS5 425 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 FAM234AQ9H0X4 552 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 GNG12Q9UBI6 72 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 IGHV1-45A0A0A0MS14 117 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 TRAV5A0A0B4J249 113 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 NPIPB6E9PJ23 425 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 KLRC4-KLRK1H3BQV0 150 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 C15orf65H3BRN8 121 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 TMEM116Q8NCL8 245 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 OR1L8Q8NGR8 309 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 ZNF414Q96IQ9 312 aa4.73□□□□□ -1.65
R3HDM1-202ENST00000409478 XIRP2A4UGR9 3374 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 hADV38S2A0JD32 116 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 SLC25A17O43808 307 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 PROP1O75360 226 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 MT-CO3P00414 261 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 CELA3AP09093 270 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 PYYP10082 97 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 CACNG7P62955 275 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 WFDC2Q14508 124 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 GAGE13Q4V321 117 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 PRR31Q5SQ13 230 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 RFESDQ8TAC1 157 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 DDB2Q92466 427 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 HINT2Q9BX68 163 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 IFI27L2Q9H2X8 130 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 ADAMTS20P59510 1910 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 A0A1B0GUT8 65 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 SHISA9B4DS77 424 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 MOSP00540 346 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 GNG5P63218 68 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 SRYQ05066 204 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 CD69Q07108 199 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 MRPL14Q6P1L8 145 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 SMRP1Q8NCR6 262 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 ATP6V0E2Q8NHE4 81 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 PHLDA1Q8WV24 401 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 FXYD5Q96DB9 178 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 MUC6Q6W4X9 2439 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 ACACAQ13085 2346 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 GRPP07492 148 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 CELA2AP08217 269 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 FXYD2P54710 66 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 SRSF1Q07955 248 aaKnown RBP eCLIP4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 KLRD1Q13241 179 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 SRSF6Q13247 344 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 POU2AF1Q16633 256 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 ETDBQ3ZM63 59 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 C8orf86Q6ZUL3 223 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 TM2D2Q9BX73 214 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 ERG28Q9UKR5 140 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 KLF13Q9Y2Y9 288 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 F11RQ9Y624 299 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 DLL1O00548 723 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 NKX2-8O15522 239 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 HBDP02042 147 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 COL8A1P27658 744 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 TBC1D28Q2M2D7 210 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 RPL39P5Q59GN2 51 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 MORN5Q5VZ52 161 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 ACP7Q6ZNF0 438 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 Q6ZS52 159 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 Q6ZS92 163 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 FAM90A1Q86YD7 464 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 PCP2Q8IVA1 136 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 ABCA7Q8IZY2 2146 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 PIP4P2Q8N4L2 257 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 OR9G1Q8NH87 305 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 ARPC1AQ92747 370 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 ZNF479Q96JC4 524 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 IMMP1LQ96LU5 166 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 CHAC1Q9BUX1 264 aa4.72□□□□□ -1.65
R3HDM1-202ENST00000409478 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 TCRBV4S1A1TA0A5B7 111 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 IGLL5B9A064 214 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 SPINK8P0C7L1 97 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 CYB561P49447 251 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 Q6AWC8 147 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 LINC00322Q6ZN03 302 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 CEND1Q8N111 149 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 C8orf46Q8TAG6 207 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 ITLN1Q8WWA0 313 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 VCX2Q9H322 139 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 PGPA6NDG6 321 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 COX6A1P12074 109 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 HLA-DRB4P13762 266 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 ACP1P24666 158 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 NXPH1P58417 271 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 MOB3BQ86TA1 216 aa4.71□□□□□ -1.66
R3HDM1-202ENST00000409478 TMEM190Q8WZ59 177 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 201.6 ms