RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 SOX21Q9Y651 276 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-205ENST00000409455 A0A087X0K7 114 aa12.5□□□□□ -0.41
LIMS2-205ENST00000409455 PSMB11A5LHX3 300 aa12.5□□□□□ -0.41
LIMS2-205ENST00000409455 S100A7P31151 101 aa12.5□□□□□ -0.41
LIMS2-205ENST00000409455 FABP6P51161 128 aa12.5□□□□□ -0.41
LIMS2-205ENST00000409455 CT45A1Q5HYN5 189 aa12.5□□□□□ -0.41
LIMS2-205ENST00000409455 CT45A3Q8NHU0 189 aa12.5□□□□□ -0.41
LIMS2-205ENST00000409455 RPP21Q9H633 154 aaKnown RBP12.5□□□□□ -0.41
LIMS2-205ENST00000409455 C7orf69Q9H7B7 122 aa12.5□□□□□ -0.41
LIMS2-205ENST00000409455 LOC102724200A0A096LPH7 203 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-205ENST00000409455 TRAV8-6A0A0B4J262 113 aa12.49□□□□□ -0.41
LIMS2-205ENST00000409455 HOXC12P31275 282 aa12.49□□□□□ -0.41
LIMS2-205ENST00000409455 GPR183P32249 361 aa12.49□□□□□ -0.41
LIMS2-205ENST00000409455 MZT1Q08AG7 82 aa12.49□□□□□ -0.41
LIMS2-205ENST00000409455 C10orf113Q5VZT2 155 aa12.49□□□□□ -0.41
LIMS2-205ENST00000409455 ZNF841Q6ZN19 808 aa12.49□□□□□ -0.41
LIMS2-205ENST00000409455 C1orf162Q8NEQ5 155 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-205ENST00000409455 NCOR1P1Q9H4R4 102 aa12.49□□□□□ -0.41
LIMS2-205ENST00000409455 RAB9BQ9NP90 201 aa12.49□□□□□ -0.41
LIMS2-205ENST00000409455 HSPB8Q9UJY1 196 aa12.49□□□□□ -0.41
LIMS2-205ENST00000409455 H0Y8G0 127 aa12.49□□□□□ -0.41
LIMS2-205ENST00000409455 UPK2O00526 184 aa12.49□□□□□ -0.41
LIMS2-205ENST00000409455 ZNRF1Q8ND25 227 aa12.49□□□□□ -0.41
LIMS2-205ENST00000409455 OR1L4Q8NGR5 311 aa12.49□□□□□ -0.41
LIMS2-205ENST00000409455 C7orf71A4D174 169 aa12.48□□□□□ -0.41
LIMS2-205ENST00000409455 A8MWL6 223 aa12.48□□□□□ -0.41
LIMS2-205ENST00000409455 ZZEF1O43149 2961 aa12.48□□□□□ -0.41
LIMS2-205ENST00000409455 IGKV3-15P01624 115 aa12.48□□□□□ -0.41
LIMS2-205ENST00000409455 RNASE2P10153 161 aaKnown RBP12.48□□□□□ -0.41
LIMS2-205ENST00000409455 UTF1Q5T230 341 aa12.48□□□□□ -0.41
LIMS2-205ENST00000409455 ZNF474Q6S9Z5 364 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-205ENST00000409455 CACNG8Q8WXS5 425 aa12.48□□□□□ -0.41
LIMS2-205ENST00000409455 MEGF9Q9H1U4 602 aa12.48□□□□□ -0.41
LIMS2-205ENST00000409455 TEX50A0A1B0GTY4 177 aa12.48□□□□□ -0.41
LIMS2-205ENST00000409455 SRRM5B3KS81 715 aa12.48□□□□□ -0.41
LIMS2-205ENST00000409455 CD24P25063 80 aa12.48□□□□□ -0.41
LIMS2-205ENST00000409455 GNG5P63218 68 aa12.48□□□□□ -0.41
LIMS2-205ENST00000409455 PRR30Q53SZ7 412 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-205ENST00000409455 H1FXQ92522 213 aaKnown RBP12.48□□□□□ -0.41
LIMS2-205ENST00000409455 ZNF835Q9Y2P0 537 aa12.48□□□□□ -0.41
LIMS2-205ENST00000409455 IGLC1P0CG04 106 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 TLN1Q9Y490 2541 aaKnown RBP12.47□□□□□ -0.41
LIMS2-205ENST00000409455 IGHV3OR15-7A0A075B7D8 119 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 GAGE10A6NGK3 116 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 CHEK1O14757 476 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 P01737 135 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 CT83Q5H943 113 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 VHLLQ6RSH7 139 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 BHLHA15Q7RTS1 189 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-205ENST00000409455 PDPNQ86YL7 162 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 GCSAMQ8N6F7 178 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 OR2Z1Q8NG97 314 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 PGLYRP4Q96LB8 373 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 GPR82Q96P67 336 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 PMCHL2Q9BQD1 86 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 PIEZO1Q92508 2521 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 TNCP24821 2201 aa12.47□□□□□ -0.41
LIMS2-205ENST00000409455 ZGRF1Q86YA3 2104 aa12.46□□□□□ -0.41
LIMS2-205ENST00000409455 SLC25A5P05141 298 aaKnown RBP12.46□□□□□ -0.41
LIMS2-205ENST00000409455 UCNP55089 124 aa12.46□□□□□ -0.41
LIMS2-205ENST00000409455 SEC11AP67812 179 aa12.46□□□□□ -0.41
LIMS2-205ENST00000409455 BPIFA4PQ86YQ2 179 aa12.46□□□□□ -0.41
LIMS2-205ENST00000409455 FXYD5Q96DB9 178 aa12.46□□□□□ -0.41
LIMS2-205ENST00000409455 EPDR1Q9UM22 224 aa12.46□□□□□ -0.41
LIMS2-205ENST00000409455 NBEAQ8NFP9 2946 aa12.46□□□□□ -0.41
LIMS2-205ENST00000409455 TMEM238C9JI98 176 aa12.46□□□□□ -0.42
LIMS2-205ENST00000409455 PRRG2O14669 202 aa12.46□□□□□ -0.42
LIMS2-205ENST00000409455 APOA2P02652 100 aa12.46□□□□□ -0.42
LIMS2-205ENST00000409455 IGKV1-16P04430 117 aa12.46□□□□□ -0.42
LIMS2-205ENST00000409455 GFRALQ6UXV0 394 aa12.46□□□□□ -0.42
LIMS2-205ENST00000409455 GTF2H5Q6ZYL4 71 aa12.46□□□□□ -0.42
LIMS2-205ENST00000409455 SGK494Q96LW2 274 aa12.46□□□□□ -0.42
LIMS2-205ENST00000409455 NDFIP1Q9BT67 221 aa12.46□□□□□ -0.42
LIMS2-205ENST00000409455 MCRIP2Q9BUT9 160 aaKnown RBP12.46□□□□□ -0.42
LIMS2-205ENST00000409455 NCOR2Q9Y618 2525 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 COX8AP10176 69 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 HTR1DP28221 377 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 ZNF137PP52743 207 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 ARF6P62330 175 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 C17orf58Q2M2W7 97 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 RBPMS2Q6ZRY4 209 aaKnown RBP12.45□□□□□ -0.42
LIMS2-205ENST00000409455 OR10W1Q8NGF6 305 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 GTSF1Q8WW33 167 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 AP1S3Q96PC3 154 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 RPH3ALQ9UNE2 315 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 KBTBD11-OT1A0A1B0GTJ5 212 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 CECR9P0C854 216 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 ERHP84090 104 aaKnown RBP12.45□□□□□ -0.42
LIMS2-205ENST00000409455 TMEM177Q53S58 311 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 ZNF430Q9H8G1 570 aaPredicted RBP12.45□□□□□ -0.42
LIMS2-205ENST00000409455 SH3BGRL2Q9UJC5 107 aa12.45□□□□□ -0.42
LIMS2-205ENST00000409455 LINC01545Q5VT33 79 aa12.44□□□□□ -0.42
LIMS2-205ENST00000409455 DAZAP1Q96EP5 407 aaKnown RBP12.44□□□□□ -0.42
LIMS2-205ENST00000409455 PRSS22Q9GZN4 317 aa12.44□□□□□ -0.42
LIMS2-205ENST00000409455 GFRA4Q9GZZ7 299 aa12.44□□□□□ -0.42
LIMS2-205ENST00000409455 TIMM8BQ9Y5J9 83 aaPredicted RBP12.44□□□□□ -0.42
LIMS2-205ENST00000409455 SRRM4A7MD48 611 aaKnown RBP12.44□□□□□ -0.42
LIMS2-205ENST00000409455 PPIAL4DF5H284 164 aa12.44□□□□□ -0.42
LIMS2-205ENST00000409455 SAP30O75446 220 aa12.44□□□□□ -0.42
LIMS2-205ENST00000409455 SAA1P0DJI8 122 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms