RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 C1orf194Q5T5A4 169 aa12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 H1FXQ92522 213 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 ZNF137PP52743 207 aa12.75□□□□□ -0.37
CHRFAM7A-203ENST00000401522 LINC00310P59036 64 aa12.75□□□□□ -0.37
CHRFAM7A-203ENST00000401522 BPIFB3P59826 476 aa12.75□□□□□ -0.37
CHRFAM7A-203ENST00000401522 LMO4P61968 165 aa12.75□□□□□ -0.37
CHRFAM7A-203ENST00000401522 THAP8Q8NA92 274 aa12.75□□□□□ -0.37
CHRFAM7A-203ENST00000401522 OR8B3Q8NGG8 313 aa12.75□□□□□ -0.37
CHRFAM7A-203ENST00000401522 ST6GALNAC6Q969X2 333 aa12.75□□□□□ -0.37
CHRFAM7A-203ENST00000401522 OR8B2Q96RD0 313 aa12.75□□□□□ -0.37
CHRFAM7A-203ENST00000401522 CDC42EP3Q9UKI2 254 aa12.75□□□□□ -0.37
CHRFAM7A-203ENST00000401522 IGHV4-61A0A0C4DH41 118 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 KIR2DL5BA0A0G2JN68 375 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 KIR2DL5BA0A0G2JPC4 375 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 A0A1B0GV90 55 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 TCRBV4S1A1TA0A5B7 111 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 SERF1AO75920 110 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 IGLV2-23P01705 113 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 IGLV2-8P01709 118 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 WT1-ASQ06250 92 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 VMA21Q3ZAQ7 101 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 C10orf113Q5VZT2 155 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 BAGE3Q86Y29 109 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 BAGE2Q86Y30 109 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 KIR2DL5AQ8N109 375 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 OR5AU1Q8NGC0 362 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 RNASE7Q9H1E1 156 aaKnown RBP12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 POLR3KQ9Y2Y1 108 aaPredicted RBP12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 SMIM27A0A1W2PRY6 76 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 CGB1A6NKQ9 187 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 MC5RP33032 325 aa12.74□□□□□ -0.37
CHRFAM7A-203ENST00000401522 MAP1AP78559 2803 aaPredicted RBP12.73□□□□□ -0.37
CHRFAM7A-203ENST00000401522 A0A096LNT2 108 aa12.73□□□□□ -0.37
CHRFAM7A-203ENST00000401522 TRAV5A0A0B4J249 113 aa12.73□□□□□ -0.37
CHRFAM7A-203ENST00000401522 E7EUB6 86 aa12.73□□□□□ -0.37
CHRFAM7A-203ENST00000401522 MGST1P10620 155 aaKnown RBP12.73□□□□□ -0.37
CHRFAM7A-203ENST00000401522 DLX6P56179 175 aa12.73□□□□□ -0.37
CHRFAM7A-203ENST00000401522 IBA57Q5T440 356 aaKnown RBP12.73□□□□□ -0.37
CHRFAM7A-203ENST00000401522 TGIF2LXQ8IUE1 241 aa12.73□□□□□ -0.37
CHRFAM7A-203ENST00000401522 PAXXQ9BUH6 204 aa12.73□□□□□ -0.37
CHRFAM7A-203ENST00000401522 NAT8BQ9UHF3 227 aa12.73□□□□□ -0.37
CHRFAM7A-203ENST00000401522 ZNF705FA8MVS1 300 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 AMY1AP04745 511 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 ZNF705DP0CH99 300 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 ZNF705BP0CI00 300 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 MORN5Q5VZ52 161 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 TMEM136Q6ZRR5 245 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 Q6ZWC4 215 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 NPIPB3Q92617 1050 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 Q96MF0 132 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 FNDC4Q9H6D8 234 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 ZNF355PQ9NSJ1 428 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 SNRPCP09234 159 aaKnown RBP12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 FRMD6-AS1P0C7T7 363 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 LGALS7P47929 136 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 SSBP2P81877 361 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 FXYD3Q14802 87 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 USF2Q15853 346 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 C10orf55Q5SWW7 151 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 ETFRF1Q6IPR1 90 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 MISP3Q96FF7 219 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 TBX15Q96SF7 602 aa12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 SSBP3Q9BWW4 388 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 AMMECR1Q9Y4X0 333 aaPredicted RBP12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 PRRC2AP48634 2157 aaKnown RBP12.72□□□□□ -0.37
CHRFAM7A-203ENST00000401522 YLPM1P49750 1951 aaKnown RBP12.71□□□□□ -0.37
CHRFAM7A-203ENST00000401522 IGKV1D-37A0A075B6S9 117 aa12.71□□□□□ -0.37
CHRFAM7A-203ENST00000401522 HLA-DQA1P01909 254 aa12.71□□□□□ -0.37
CHRFAM7A-203ENST00000401522 LOXL1Q08397 574 aaPredicted RBP12.71□□□□□ -0.37
CHRFAM7A-203ENST00000401522 DIAPH2-AS1Q14236 149 aa12.71□□□□□ -0.37
CHRFAM7A-203ENST00000401522 OR10J3Q5JRS4 329 aa12.71□□□□□ -0.37
CHRFAM7A-203ENST00000401522 FAM231DQ6ZW35 169 aa12.71□□□□□ -0.37
CHRFAM7A-203ENST00000401522 ZNF329Q86UD4 541 aa12.71□□□□□ -0.37
CHRFAM7A-203ENST00000401522 WFDC11Q8NEX6 87 aa12.71□□□□□ -0.37
CHRFAM7A-203ENST00000401522 HSPB9Q9BQS6 159 aa12.71□□□□□ -0.37
CHRFAM7A-203ENST00000401522 IZUMO1RA6ND01 250 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 PATE2Q6UY27 113 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 STXBP6Q8NFX7 210 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 SAMD10Q9BYL1 202 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 GNB4Q9HAV0 340 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 CCDC168Q8NDH2 2452 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 PEX7O00628 323 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 SLC25A17O43808 307 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 BRS3P32247 399 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 TCL1AP56279 114 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 PVRIGQ6DKI7 326 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 TOMM20LQ6UXN7 152 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 TEX43Q6ZNM6 134 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 SERTAD4Q9NUC0 356 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 NOTCH2Q04721 2471 aa12.7□□□□□ -0.38
CHRFAM7A-203ENST00000401522 A0A1W2PPI3 338 aa12.69□□□□□ -0.38
CHRFAM7A-203ENST00000401522 RNF223E7ERA6 249 aa12.69□□□□□ -0.38
CHRFAM7A-203ENST00000401522 IGHV1-8P0DP01 117 aa12.69□□□□□ -0.38
CHRFAM7A-203ENST00000401522 PYYP10082 97 aa12.69□□□□□ -0.38
CHRFAM7A-203ENST00000401522 ZFP36P26651 326 aaKnown RBP12.69□□□□□ -0.38
CHRFAM7A-203ENST00000401522 TPTE2P1Q5T6R2 138 aa12.69□□□□□ -0.38
CHRFAM7A-203ENST00000401522 RASL11AQ6T310 242 aa12.69□□□□□ -0.38
CHRFAM7A-203ENST00000401522 SIGLECL1Q8N7X8 197 aa12.69□□□□□ -0.38
CHRFAM7A-203ENST00000401522 TEX45Q8NA69 505 aa12.69□□□□□ -0.38
CHRFAM7A-203ENST00000401522 FXYD5Q96DB9 178 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms