RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 IGHV3-11P01762 117 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 CD81P60033 236 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 WT1-ASQ06250 92 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 CPAMD8Q8IZJ3 1885 aa11.32□□□□□ -0.6
SCAF4-202ENST00000399804 NPFFO15130 113 aa11.32□□□□□ -0.6
SCAF4-202ENST00000399804 GNG5P63218 68 aa11.32□□□□□ -0.6
SCAF4-202ENST00000399804 ZNF726P1Q15940 193 aa11.32□□□□□ -0.6
SCAF4-202ENST00000399804 POU2AF1Q16633 256 aa11.32□□□□□ -0.6
SCAF4-202ENST00000399804 PACRGQ96M98 296 aaPredicted RBP11.32□□□□□ -0.6
SCAF4-202ENST00000399804 TFPI2P48307 235 aa11.32□□□□□ -0.6
SCAF4-202ENST00000399804 JKAMPQ9P055 326 aa11.32□□□□□ -0.6
SCAF4-202ENST00000399804 DAZAP2Q15038 168 aaPredicted RBP11.32□□□□□ -0.6
SCAF4-202ENST00000399804 KIAA1644Q3SXP7 199 aa11.32□□□□□ -0.6
SCAF4-202ENST00000399804 FAM162BQ5T6X4 162 aa11.32□□□□□ -0.6
SCAF4-202ENST00000399804 CDPF1Q6NVV7 123 aa11.32□□□□□ -0.6
SCAF4-202ENST00000399804 PROP1O75360 226 aa11.31□□□□□ -0.6
SCAF4-202ENST00000399804 RNF224P0DH78 156 aa11.31□□□□□ -0.6
SCAF4-202ENST00000399804 Q9H3A6 140 aa11.31□□□□□ -0.6
SCAF4-202ENST00000399804 APCSP02743 223 aa11.31□□□□□ -0.6
SCAF4-202ENST00000399804 RELQ04864 619 aaPredicted RBP11.31□□□□□ -0.6
SCAF4-202ENST00000399804 LRRK2Q5S007 2527 aa11.31□□□□□ -0.6
SCAF4-202ENST00000399804 USP9XQ93008 2570 aaPredicted RBP11.31□□□□□ -0.6
SCAF4-202ENST00000399804 ISLRO14498 428 aa11.31□□□□□ -0.6
SCAF4-202ENST00000399804 PRB4P10163 310 aaPredicted RBP11.31□□□□□ -0.6
SCAF4-202ENST00000399804 RIGQ13278 110 aa11.31□□□□□ -0.6
SCAF4-202ENST00000399804 PYY3Q5JQD4 70 aa11.31□□□□□ -0.6
SCAF4-202ENST00000399804 UTF1Q5T230 341 aa11.31□□□□□ -0.6
SCAF4-202ENST00000399804 C19orf35Q6ZS72 473 aa11.31□□□□□ -0.6
SCAF4-202ENST00000399804 FA2HQ7L5A8 372 aa11.31□□□□□ -0.6
SCAF4-202ENST00000399804 WDFY4Q6ZS81 3184 aa11.31□□□□□ -0.6
SCAF4-202ENST00000399804 A0A1B0GWJ7 208 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 B4DSR2 109 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 CBLN1P23435 193 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 PVRIGQ6DKI7 326 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 A0A1B0GV90 55 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 SIAH2O43255 324 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 PRB1P04280 392 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 FOLR2P14207 255 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 TMEM78Q5T7P6 136 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 FAM90A2PQ658T7 463 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 ZNF705AQ6ZN79 300 aaPredicted RBP11.3□□□□□ -0.6
SCAF4-202ENST00000399804 PRSS3P2Q8NHM4 247 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 ELOVL1Q9BW60 279 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 A0A1W2PS18 150 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 SP5Q6BEB4 398 aaPredicted RBP11.3□□□□□ -0.6
SCAF4-202ENST00000399804 TOMM20LQ6UXN7 152 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 C8orf46Q8TAG6 207 aa11.3□□□□□ -0.6
SCAF4-202ENST00000399804 ITLN2Q8WWU7 325 aaPredicted RBP11.3□□□□□ -0.6
SCAF4-202ENST00000399804 RNASE7Q9H1E1 156 aaKnown RBP11.3□□□□□ -0.6
SCAF4-202ENST00000399804 RAB9AP51151 201 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 ELOBQ15370 118 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 DMRTC2Q8IXT2 367 aaPredicted RBP11.29□□□□□ -0.6
SCAF4-202ENST00000399804 IGFBPL1Q8WX77 278 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 PGLYRP4Q96LB8 373 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 MRPL18Q9H0U6 180 aaKnown RBP11.29□□□□□ -0.6
SCAF4-202ENST00000399804 PSG9Q00887 426 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 CR1LQ2VPA4 569 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 C15orf32Q32M92 178 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 TRGV9Q99603 122 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 ADAMTS20P59510 1910 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 FNDC10F2Z333 226 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 H3BUX3 64 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 FAM106AQ4KMX7 169 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 ZNF738Q8NE65 137 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 DDB2Q92466 427 aa11.29□□□□□ -0.6
SCAF4-202ENST00000399804 CXCL1P09341 107 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 CDX1P47902 265 aaPredicted RBP11.28□□□□□ -0.6
SCAF4-202ENST00000399804 UBE2E1P51965 193 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 TAS2R60P59551 318 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 SCRT1Q9BWW7 348 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 EPDR1Q9UM22 224 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 TBL2Q9Y4P3 447 aaKnown RBP11.28□□□□□ -0.6
SCAF4-202ENST00000399804 YTHDF2Q9Y5A9 579 aaKnown RBP11.28□□□□□ -0.6
SCAF4-202ENST00000399804 TMEM189A5PLL7 270 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 MT-ND6P03923 174 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 CGB3P0DN86 165 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 CGB7P0DN87 165 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 ZNF562Q6V9R5 426 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
SCAF4-202ENST00000399804 EPG5Q9HCE0 2579 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 A0A087X0M5 115 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 A0A1B0GX30 115 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 RUSC1-AS1Q66K80 236 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 MAPK1IP1LQ8NDC0 245 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 GPR82Q96P67 336 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 IL36BQ9NZH7 164 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 IGHV2-70DA0A0C4DH43 119 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 DSCR9P59020 149 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 IQCJQ1A5X6 159 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 TXN2Q99757 166 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 UFC1Q9Y3C8 167 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 REV3LO60673 3130 aa11.28□□□□□ -0.6
SCAF4-202ENST00000399804 LINC01551Q86U37 167 aa11.27□□□□□ -0.6
SCAF4-202ENST00000399804 SONP18583 2426 aaKnown RBP11.27□□□□□ -0.61
SCAF4-202ENST00000399804 GRIFINA4D1Z8 144 aa11.27□□□□□ -0.61
SCAF4-202ENST00000399804 PMS2P5A8MQ11 134 aa11.27□□□□□ -0.61
SCAF4-202ENST00000399804 MOB4Q9Y3A3 225 aa11.27□□□□□ -0.61
SCAF4-202ENST00000399804 HLA-DQA1P01909 254 aa11.27□□□□□ -0.61
SCAF4-202ENST00000399804 BRWD1-AS2P59051 145 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms