RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 EIF3GO75821 320 aaKnown RBP eCLIP12.48□□□□□ -0.41
TNRC18-202ENST00000399434 ARL3P36405 182 aa12.48□□□□□ -0.41
TNRC18-202ENST00000399434 SELENOTP62341 195 aa12.48□□□□□ -0.41
TNRC18-202ENST00000399434 ZNF616Q08AN1 781 aa12.48□□□□□ -0.41
TNRC18-202ENST00000399434 ZNF726P1Q15940 193 aa12.48□□□□□ -0.41
TNRC18-202ENST00000399434 TMEM41BQ5BJD5 291 aa12.48□□□□□ -0.41
TNRC18-202ENST00000399434 PATE2Q6UY27 113 aa12.48□□□□□ -0.41
TNRC18-202ENST00000399434 C11orf44Q8N8P7 122 aa12.48□□□□□ -0.41
TNRC18-202ENST00000399434 ZFAND3Q9H8U3 227 aa12.48□□□□□ -0.41
TNRC18-202ENST00000399434 I3L521 148 aa12.47□□□□□ -0.41
TNRC18-202ENST00000399434 NUPL2O15504 423 aaKnown RBP12.47□□□□□ -0.41
TNRC18-202ENST00000399434 NMBP08949 121 aa12.47□□□□□ -0.41
TNRC18-202ENST00000399434 KRTAP24-1Q3LI83 254 aa12.47□□□□□ -0.41
TNRC18-202ENST00000399434 RPP25LQ8N5L8 163 aaKnown RBP12.47□□□□□ -0.41
TNRC18-202ENST00000399434 TMEM37Q8WXS4 190 aa12.47□□□□□ -0.41
TNRC18-202ENST00000399434 GAR1Q9NY12 217 aaKnown RBP12.47□□□□□ -0.41
TNRC18-202ENST00000399434 DOK5Q9P104 306 aa12.47□□□□□ -0.41
TNRC18-202ENST00000399434 WI2-2373I1.2A0A1W2PRP0 233 aa12.46□□□□□ -0.41
TNRC18-202ENST00000399434 UMAD1C9J7I0 102 aa12.46□□□□□ -0.41
TNRC18-202ENST00000399434 OR2C1O95371 312 aa12.46□□□□□ -0.41
TNRC18-202ENST00000399434 RD3LP0DJH9 198 aa12.46□□□□□ -0.41
TNRC18-202ENST00000399434 M6PRP20645 277 aa12.46□□□□□ -0.41
TNRC18-202ENST00000399434 CDX1P47902 265 aaPredicted RBP12.46□□□□□ -0.41
TNRC18-202ENST00000399434 PLP1P60201 277 aa12.46□□□□□ -0.41
TNRC18-202ENST00000399434 USF2Q15853 346 aaPredicted RBP12.46□□□□□ -0.41
TNRC18-202ENST00000399434 AKR1C8PQ5T2L2 129 aa12.46□□□□□ -0.41
TNRC18-202ENST00000399434 SPATA31B1PQ5VZV4 182 aa12.46□□□□□ -0.41
TNRC18-202ENST00000399434 SPSB3Q6PJ21 355 aa12.46□□□□□ -0.41
TNRC18-202ENST00000399434 ZNF600Q6ZNG1 722 aa12.46□□□□□ -0.41
TNRC18-202ENST00000399434 RCC1LQ96I51 464 aaKnown RBP12.46□□□□□ -0.41
TNRC18-202ENST00000399434 PUS1Q9Y606 427 aaKnown RBP eCLIP12.46□□□□□ -0.41
TNRC18-202ENST00000399434 ADARB2-AS1A8MUL3 147 aa12.46□□□□□ -0.42
TNRC18-202ENST00000399434 MORN5Q5VZ52 161 aa12.46□□□□□ -0.42
TNRC18-202ENST00000399434 OR51G1Q8NGK1 321 aa12.46□□□□□ -0.42
TNRC18-202ENST00000399434 OR10G4Q8NGN3 311 aa12.46□□□□□ -0.42
TNRC18-202ENST00000399434 OR10G9Q8NGN4 311 aa12.46□□□□□ -0.42
TNRC18-202ENST00000399434 OR10G7Q8NGN6 311 aa12.46□□□□□ -0.42
TNRC18-202ENST00000399434 FAM213BQ8TBF2 198 aa12.46□□□□□ -0.42
TNRC18-202ENST00000399434 WFDC12Q8WWY7 111 aa12.46□□□□□ -0.42
TNRC18-202ENST00000399434 CITED2Q99967 270 aaPredicted RBP12.46□□□□□ -0.42
TNRC18-202ENST00000399434 PEF1Q9UBV8 284 aaKnown RBP12.46□□□□□ -0.42
TNRC18-202ENST00000399434 IGHV4OR15-8A0A075B7B6 117 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 IGHV3OR16-8A0A075B7F1 116 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 A0A087WW49 117 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 SEC14L6B5MCN3 397 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 IL4P05112 153 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 OR5G3P0C626 314 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 LYZP61626 148 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 DEFB136Q30KP8 78 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 ACOT6Q3I5F7 207 aaPredicted RBP12.45□□□□□ -0.42
TNRC18-202ENST00000399434 KHDC1LQ5JSQ8 128 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 FAM122CQ6P4D5 195 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 TOMM20LQ6UXN7 152 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 Q6ZRG5 221 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 RNF141Q8WVD5 230 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 C4orf3Q8WVX3 66 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 RNF125Q96EQ8 232 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 SLC25A22Q9H936 323 aa12.45□□□□□ -0.42
TNRC18-202ENST00000399434 SEPSECSQ9HD40 501 aaKnown RBP12.45□□□□□ -0.42
TNRC18-202ENST00000399434 ZNF705EA8MWA4 302 aaPredicted RBP12.44□□□□□ -0.42
TNRC18-202ENST00000399434 MBP02144 154 aa12.44□□□□□ -0.42
TNRC18-202ENST00000399434 FABP1P07148 127 aa12.44□□□□□ -0.42
TNRC18-202ENST00000399434 ORM2P19652 201 aa12.44□□□□□ -0.42
TNRC18-202ENST00000399434 RAB5CP51148 216 aa12.44□□□□□ -0.42
TNRC18-202ENST00000399434 UNQ9165/PRO28630Q6UXU0 137 aa12.44□□□□□ -0.42
TNRC18-202ENST00000399434 DPPA3Q6W0C5 159 aa12.44□□□□□ -0.42
TNRC18-202ENST00000399434 KLHL30-AS1Q8NEE0 82 aa12.44□□□□□ -0.42
TNRC18-202ENST00000399434 OR1B1Q8NGR6 318 aa12.44□□□□□ -0.42
TNRC18-202ENST00000399434 UHRF2Q96PU4 802 aa12.44□□□□□ -0.42
TNRC18-202ENST00000399434 A0A1B0GUS0 222 aa12.43□□□□□ -0.42
TNRC18-202ENST00000399434 COX7A2P2O60397 106 aa12.43□□□□□ -0.42
TNRC18-202ENST00000399434 GGCTO75223 188 aaKnown RBP12.43□□□□□ -0.42
TNRC18-202ENST00000399434 SCGB2A1O75556 95 aa12.43□□□□□ -0.42
TNRC18-202ENST00000399434 FAM209BQ5JX69 171 aa12.43□□□□□ -0.42
TNRC18-202ENST00000399434 CLLU1Q5K131 121 aa12.43□□□□□ -0.42
TNRC18-202ENST00000399434 MIR17HGQ75NE6 70 aa12.43□□□□□ -0.42
TNRC18-202ENST00000399434 Q8WTZ3 238 aa12.43□□□□□ -0.42
TNRC18-202ENST00000399434 MRPL27Q9P0M9 148 aaKnown RBP12.43□□□□□ -0.42
TNRC18-202ENST00000399434 ATRQ13535 2644 aa12.43□□□□□ -0.42
TNRC18-202ENST00000399434 HYPMO75409 117 aa12.42□□□□□ -0.42
TNRC18-202ENST00000399434 CDC34P49427 236 aaPredicted RBP12.42□□□□□ -0.42
TNRC18-202ENST00000399434 RELQ04864 619 aaPredicted RBP12.42□□□□□ -0.42
TNRC18-202ENST00000399434 AWAT1Q58HT5 328 aa12.42□□□□□ -0.42
TNRC18-202ENST00000399434 PXDC1Q5TGL8 231 aa12.42□□□□□ -0.42
TNRC18-202ENST00000399434 C8orf86Q6ZUL3 223 aa12.42□□□□□ -0.42
TNRC18-202ENST00000399434 OR1L4Q8NGR5 311 aa12.42□□□□□ -0.42
TNRC18-202ENST00000399434 TMEM190Q8WZ59 177 aa12.42□□□□□ -0.42
TNRC18-202ENST00000399434 RAB24Q969Q5 203 aa12.42□□□□□ -0.42
TNRC18-202ENST00000399434 SAT2Q96F10 170 aaPredicted RBP12.42□□□□□ -0.42
TNRC18-202ENST00000399434 PBDC1Q9BVG4 233 aa12.42□□□□□ -0.42
TNRC18-202ENST00000399434 DNAJC4Q9NNZ3 241 aa12.42□□□□□ -0.42
TNRC18-202ENST00000399434 CTXND1A0A1B0GTU2 59 aa12.41□□□□□ -0.42
TNRC18-202ENST00000399434 A0A1W2PRX2 142 aa12.41□□□□□ -0.42
TNRC18-202ENST00000399434 NDUFA4O00483 81 aa12.41□□□□□ -0.42
TNRC18-202ENST00000399434 HMGB3O15347 200 aaKnown RBP12.41□□□□□ -0.42
TNRC18-202ENST00000399434 FOXL1Q12952 345 aa12.41□□□□□ -0.42
TNRC18-202ENST00000399434 FAM78BQ5VT40 261 aa12.41□□□□□ -0.42
TNRC18-202ENST00000399434 C10orf113Q5VZT2 155 aa12.41□□□□□ -0.42
TNRC18-202ENST00000399434 GATAD1Q8WUU5 269 aa12.41□□□□□ -0.42
TNRC18-202ENST00000399434 SCRT1Q9BWW7 348 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms