RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ZC2HC1AQ96GY0 325 aa11.28□□□□□ -0.6
APOB-202ENST00000399256 GSX1Q9H4S2 264 aaPredicted RBP11.28□□□□□ -0.6
APOB-202ENST00000399256 ZFHX4Q86UP3 3567 aa11.28□□□□□ -0.6
APOB-202ENST00000399256 ZFHX2Q9C0A1 2572 aaPredicted RBP11.27□□□□□ -0.6
APOB-202ENST00000399256 IGKV1D-37A0A075B6S9 117 aa11.27□□□□□ -0.6
APOB-202ENST00000399256 TCRBV4S1A1TA0A5B7 111 aa11.27□□□□□ -0.6
APOB-202ENST00000399256 FSTL3O95633 263 aa11.27□□□□□ -0.6
APOB-202ENST00000399256 P01737 135 aa11.27□□□□□ -0.6
APOB-202ENST00000399256 PPBPP02775 128 aa11.27□□□□□ -0.6
APOB-202ENST00000399256 ATP5IP56385 69 aaPredicted RBP11.27□□□□□ -0.6
APOB-202ENST00000399256 FAM162BQ5T6X4 162 aa11.27□□□□□ -0.6
APOB-202ENST00000399256 SLC25A48Q6ZT89 311 aaKnown RBP11.27□□□□□ -0.6
APOB-202ENST00000399256 C1orf162Q8NEQ5 155 aaPredicted RBP11.27□□□□□ -0.6
APOB-202ENST00000399256 SCRT2Q9NQ03 307 aa11.27□□□□□ -0.6
APOB-202ENST00000399256 CSN3P07498 182 aa11.27□□□□□ -0.61
APOB-202ENST00000399256 MYCNOSP40205 109 aa11.27□□□□□ -0.61
APOB-202ENST00000399256 WT1-ASQ06250 92 aa11.27□□□□□ -0.61
APOB-202ENST00000399256 OR1B1Q8NGR6 318 aa11.27□□□□□ -0.61
APOB-202ENST00000399256 GPR82Q96P67 336 aa11.27□□□□□ -0.61
APOB-202ENST00000399256 DSCAML1Q8TD84 2053 aa11.27□□□□□ -0.61
APOB-202ENST00000399256 RIF1Q5UIP0 2472 aaKnown RBP11.27□□□□□ -0.61
APOB-202ENST00000399256 SNAI2O43623 268 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 C1RLQ9NZP8 487 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 NAV3Q8IVL0 2385 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 ICE1Q9Y2F5 2266 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 A8MWL6 223 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 M0R1B8 84 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 PSG9Q00887 426 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 FOXE3Q13461 319 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 C12orf54Q6X4T0 127 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 GAFA1Q96PS6 74 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 MAP1LC3CQ9BXW4 147 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 TANC2Q9HCD6 1990 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 CHEK1O14757 476 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 RUSC1-AS1Q66K80 236 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 ASCL5Q7RTU5 278 aa11.26□□□□□ -0.61
APOB-202ENST00000399256 RPUSD1Q9UJJ7 312 aaKnown RBP11.26□□□□□ -0.61
APOB-202ENST00000399256 SPENQ96T58 3664 aaKnown RBP11.26□□□□□ -0.61
APOB-202ENST00000399256 BHLHA15Q7RTS1 189 aaPredicted RBP11.25□□□□□ -0.61
APOB-202ENST00000399256 ZNF835Q9Y2P0 537 aa11.25□□□□□ -0.61
APOB-202ENST00000399256 RAI1Q7Z5J4 1906 aaPredicted RBP11.25□□□□□ -0.61
APOB-202ENST00000399256 CGB1A6NKQ9 187 aa11.25□□□□□ -0.61
APOB-202ENST00000399256 TOX4O94842 621 aa11.25□□□□□ -0.61
APOB-202ENST00000399256 S100A7P31151 101 aa11.25□□□□□ -0.61
APOB-202ENST00000399256 MLST8Q9BVC4 326 aa11.25□□□□□ -0.61
APOB-202ENST00000399256 TRAV8-6A0A0B4J262 113 aa11.24□□□□□ -0.61
APOB-202ENST00000399256 TM4SF5O14894 197 aa11.24□□□□□ -0.61
APOB-202ENST00000399256 APOA2P02652 100 aa11.24□□□□□ -0.61
APOB-202ENST00000399256 LIPFP07098 398 aa11.24□□□□□ -0.61
APOB-202ENST00000399256 DAZAP1Q96EP5 407 aaKnown RBP11.24□□□□□ -0.61
APOB-202ENST00000399256 TMUB1Q9BVT8 246 aa11.24□□□□□ -0.61
APOB-202ENST00000399256 PRSS22Q9GZN4 317 aa11.24□□□□□ -0.61
APOB-202ENST00000399256 Q71RC1 249 aaPredicted RBP11.24□□□□□ -0.61
APOB-202ENST00000399256 OSR1Q8TAX0 266 aaPredicted RBP11.24□□□□□ -0.61
APOB-202ENST00000399256 RNF7Q9UBF6 113 aa11.24□□□□□ -0.61
APOB-202ENST00000399256 INTS1Q8N201 2190 aaKnown RBP11.24□□□□□ -0.61
APOB-202ENST00000399256 GVINP1Q7Z2Y8 2422 aa11.24□□□□□ -0.61
APOB-202ENST00000399256 LOC400499M0QZD8 3231 aa11.24□□□□□ -0.61
APOB-202ENST00000399256 NBEAP1P0C6P0 100 aa11.24□□□□□ -0.61
APOB-202ENST00000399256 RBPMS2Q6ZRY4 209 aaKnown RBP11.24□□□□□ -0.61
APOB-202ENST00000399256 NCOR1P1Q9H4R4 102 aa11.24□□□□□ -0.61
APOB-202ENST00000399256 ZNF71Q9NQZ8 489 aaPredicted RBP11.24□□□□□ -0.61
APOB-202ENST00000399256 KLF12Q9Y4X4 402 aa11.24□□□□□ -0.61
APOB-202ENST00000399256 SLC25A15Q9Y619 301 aa11.24□□□□□ -0.61
APOB-202ENST00000399256 TRAV8-1A0A0A6YYK1 113 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 IGHV3-21A0A0B4J1V1 117 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 C19orf71A6NCJ1 209 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 PRB4P10163 310 aaPredicted RBP11.23□□□□□ -0.61
APOB-202ENST00000399256 SMIM15Q7Z3B0 74 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 PERPQ96FX8 193 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 SSUH2Q9Y2M2 353 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 SELENOKQ9Y6D0 94 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 SVILO95425 2214 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 ASPMQ8IZT6 3477 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 C22orf46C9J442 243 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 ARF6P62330 175 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 HIST1H1AQ02539 215 aaPredicted RBP11.23□□□□□ -0.61
APOB-202ENST00000399256 DIAPH2-AS1Q14236 149 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 PET117Q6UWS5 81 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 FAM222BQ8WU58 562 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 FLYWCH2Q96CP2 140 aaKnown RBP11.23□□□□□ -0.61
APOB-202ENST00000399256 PROCRQ9UNN8 238 aa11.23□□□□□ -0.61
APOB-202ENST00000399256 CNOT1A5YKK6 2376 aaKnown RBP11.23□□□□□ -0.61
APOB-202ENST00000399256 GAGE12BA1L429 117 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 CD5LO43866 347 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 GPR183P32249 361 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 ZNF833PQ6ZTB9 187 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 H1FXQ92522 213 aaKnown RBP11.22□□□□□ -0.61
APOB-202ENST00000399256 LTAP01374 205 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 IGHG3P01860 377 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 HLA-DRB1P01911 266 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 FAM87AP0C7U9 286 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 APELAP0DMC3 54 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 RPS20P60866 119 aaKnown RBP11.22□□□□□ -0.61
APOB-202ENST00000399256 CIARTQ8N365 385 aaPredicted RBP11.22□□□□□ -0.61
APOB-202ENST00000399256 TEX45Q8NA69 505 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 THAP8Q8NA92 274 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 FMC1Q96HJ9 113 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 PLSCR4Q9NRQ2 329 aa11.22□□□□□ -0.61
APOB-202ENST00000399256 SOX21Q9Y651 276 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms