RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 VENTXO95231 258 aa12.11□□□□□ -0.47
COL25A1-201ENST00000399126 COX6B1P14854 86 aa12.11□□□□□ -0.47
COL25A1-201ENST00000399126 LGALS7P47929 136 aa12.11□□□□□ -0.47
COL25A1-201ENST00000399126 WDR83OSQ9Y284 106 aa12.11□□□□□ -0.47
COL25A1-201ENST00000399126 HMGB3O15347 200 aaKnown RBP12.11□□□□□ -0.47
COL25A1-201ENST00000399126 TOX4O94842 621 aa12.11□□□□□ -0.47
COL25A1-201ENST00000399126 CRYGBP07316 175 aa12.11□□□□□ -0.47
COL25A1-201ENST00000399126 RNASE2P10153 161 aaKnown RBP12.11□□□□□ -0.47
COL25A1-201ENST00000399126 GCSAMLQ5JQS6 135 aa12.11□□□□□ -0.47
COL25A1-201ENST00000399126 LCN15Q6UWW0 184 aa12.11□□□□□ -0.47
COL25A1-201ENST00000399126 LINC01551Q86U37 167 aa12.11□□□□□ -0.47
COL25A1-201ENST00000399126 KIR3DL3Q8N743 410 aa12.11□□□□□ -0.47
COL25A1-201ENST00000399126 RARRES2Q99969 163 aa12.11□□□□□ -0.47
COL25A1-201ENST00000399126 URGCP-MRPS24S4R325 110 aa12.11□□□□□ -0.47
COL25A1-201ENST00000399126 FCN1O00602 326 aa12.1□□□□□ -0.47
COL25A1-201ENST00000399126 SIVA1O15304 175 aa12.1□□□□□ -0.47
COL25A1-201ENST00000399126 GNB1P62873 340 aa12.1□□□□□ -0.47
COL25A1-201ENST00000399126 RPP25LQ8N5L8 163 aaKnown RBP12.1□□□□□ -0.47
COL25A1-201ENST00000399126 SIGLEC9Q9Y336 463 aa12.1□□□□□ -0.47
COL25A1-201ENST00000399126 ZNF469Q96JG9 3925 aaPredicted RBP12.1□□□□□ -0.47
COL25A1-201ENST00000399126 PPP5D1E7EU14 171 aa12.1□□□□□ -0.47
COL25A1-201ENST00000399126 AREGP15514 252 aa12.1□□□□□ -0.47
COL25A1-201ENST00000399126 ATP5IP56385 69 aaPredicted RBP12.1□□□□□ -0.47
COL25A1-201ENST00000399126 KRTAP10-9P60411 292 aa12.1□□□□□ -0.47
COL25A1-201ENST00000399126 SSBP2P81877 361 aaPredicted RBP12.1□□□□□ -0.47
COL25A1-201ENST00000399126 PRSS8Q16651 343 aa12.1□□□□□ -0.47
COL25A1-201ENST00000399126 COA6Q5JTJ3 125 aaKnown RBP12.1□□□□□ -0.47
COL25A1-201ENST00000399126 SOHLH1Q5JUK2 328 aa12.1□□□□□ -0.47
COL25A1-201ENST00000399126 OR4A5Q8NH83 315 aa12.1□□□□□ -0.47
COL25A1-201ENST00000399126 PBDC1Q9BVG4 233 aa12.1□□□□□ -0.47
COL25A1-201ENST00000399126 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL25A1-201ENST00000399126 TOMM40O96008 361 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 SERF2P84101 59 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 TNXAQ16473 311 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 BSXQ3C1V8 233 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 FFAR4Q5NUL3 377 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 CENPVQ7Z7K6 275 aaPredicted RBP12.09□□□□□ -0.47
COL25A1-201ENST00000399126 GBGT1Q8N5D6 347 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 TMEM18Q96B42 140 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 MGST2Q99735 147 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 CSPG4Q6UVK1 2322 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 F6UZH7 168 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 M0QZ24 198 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 OR10J1P30954 320 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 TMEM249Q2WGJ8 235 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 TMEM41BQ5BJD5 291 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 TEX45Q8NA69 505 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 C20orf144Q9BQM9 153 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 SLC25A22Q9H936 323 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 TIMM9Q9Y5J7 89 aa12.09□□□□□ -0.47
COL25A1-201ENST00000399126 VWC2LB2RUY7 222 aa12.08□□□□□ -0.48
COL25A1-201ENST00000399126 IGHV3-48P01763 117 aa12.08□□□□□ -0.48
COL25A1-201ENST00000399126 OR13C7P0DN81 318 aa12.08□□□□□ -0.48
COL25A1-201ENST00000399126 CRYBA4P53673 196 aa12.08□□□□□ -0.48
COL25A1-201ENST00000399126 OR4C5Q8NGB2 326 aa12.08□□□□□ -0.48
COL25A1-201ENST00000399126 SRSF2Q01130 221 aaKnown RBP12.08□□□□□ -0.48
COL25A1-201ENST00000399126 MMDQ15546 238 aa12.08□□□□□ -0.48
COL25A1-201ENST00000399126 PPP1R27Q86WC6 154 aa12.08□□□□□ -0.48
COL25A1-201ENST00000399126 SSMEM1Q8WWF3 244 aa12.08□□□□□ -0.48
COL25A1-201ENST00000399126 M0QXV9 152 aa12.07□□□□□ -0.48
COL25A1-201ENST00000399126 LGALS4P56470 323 aa12.07□□□□□ -0.48
COL25A1-201ENST00000399126 RANP62826 216 aaKnown RBP12.07□□□□□ -0.48
COL25A1-201ENST00000399126 HES1Q14469 280 aa12.07□□□□□ -0.48
COL25A1-201ENST00000399126 C2orf83Q53S99 150 aa12.07□□□□□ -0.48
COL25A1-201ENST00000399126 MIC13Q5XKP0 118 aa12.07□□□□□ -0.48
COL25A1-201ENST00000399126 AJUBAQ96IF1 538 aa12.07□□□□□ -0.48
COL25A1-201ENST00000399126 LSM4Q9Y4Z0 139 aaKnown RBP12.07□□□□□ -0.48
COL25A1-201ENST00000399126 IGKV1OR2-108A0A075B7D4 117 aa12.07□□□□□ -0.48
COL25A1-201ENST00000399126 IGHV3OR16-10A0A075B7F0 116 aa12.07□□□□□ -0.48
COL25A1-201ENST00000399126 IGLC7A0M8Q6 106 aa12.07□□□□□ -0.48
COL25A1-201ENST00000399126 FOXH1O75593 365 aa12.07□□□□□ -0.48
COL25A1-201ENST00000399126 ZNF709Q8N972 641 aa12.07□□□□□ -0.48
COL25A1-201ENST00000399126 P2RX4Q99571 388 aa12.07□□□□□ -0.48
COL25A1-201ENST00000399126 GGTLC1Q9BX51 225 aa12.07□□□□□ -0.48
COL25A1-201ENST00000399126 PLGLAQ15195 96 aa12.06□□□□□ -0.48
COL25A1-201ENST00000399126 OCIAD2Q56VL3 154 aa12.06□□□□□ -0.48
COL25A1-201ENST00000399126 DPPA3Q6W0C5 159 aa12.06□□□□□ -0.48
COL25A1-201ENST00000399126 MMD2Q8IY49 270 aa12.06□□□□□ -0.48
COL25A1-201ENST00000399126 OR10G4Q8NGN3 311 aa12.06□□□□□ -0.48
COL25A1-201ENST00000399126 OR10G9Q8NGN4 311 aa12.06□□□□□ -0.48
COL25A1-201ENST00000399126 OR10G7Q8NGN6 311 aa12.06□□□□□ -0.48
COL25A1-201ENST00000399126 SRSF8Q9BRL6 282 aaKnown RBP12.06□□□□□ -0.48
COL25A1-201ENST00000399126 SMDT1Q9H4I9 107 aa12.06□□□□□ -0.48
COL25A1-201ENST00000399126 ACTL6BO94805 426 aa12.06□□□□□ -0.48
COL25A1-201ENST00000399126 NDUFB8O95169 186 aa12.06□□□□□ -0.48
COL25A1-201ENST00000399126 ERHP84090 104 aaKnown RBP12.06□□□□□ -0.48
COL25A1-201ENST00000399126 RUSC1-AS1Q66K80 236 aa12.06□□□□□ -0.48
COL25A1-201ENST00000399126 ZNF787Q6DD87 383 aa12.06□□□□□ -0.48
COL25A1-201ENST00000399126 NPVFQ9HCQ7 196 aa12.06□□□□□ -0.48
COL25A1-201ENST00000399126 RPL27AP46776 148 aaKnown RBP12.05□□□□□ -0.48
COL25A1-201ENST00000399126 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
COL25A1-201ENST00000399126 OR2T6Q8NHC8 308 aa12.05□□□□□ -0.48
COL25A1-201ENST00000399126 FNDC4Q9H6D8 234 aaPredicted RBP12.05□□□□□ -0.48
COL25A1-201ENST00000399126 MAP1LC3B2A6NCE7 125 aa12.05□□□□□ -0.48
COL25A1-201ENST00000399126 H3BQ15 152 aa12.05□□□□□ -0.48
COL25A1-201ENST00000399126 SAA4P35542 130 aa12.05□□□□□ -0.48
COL25A1-201ENST00000399126 MFAP2P55001 183 aa12.05□□□□□ -0.48
COL25A1-201ENST00000399126 RPUSD4Q96CM3 377 aaKnown RBP12.05□□□□□ -0.48
COL25A1-201ENST00000399126 MAP1LC3BQ9GZQ8 125 aa12.05□□□□□ -0.48
COL25A1-201ENST00000399126 MOSP00540 346 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms