RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 SCGB2A1O75556 95 aa15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 IGHV3-23P01764 117 aa15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 HBE1P02100 147 aa15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 ELANEP08246 267 aa15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 RHOBP62745 196 aa15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 KIAA0141Q14154 515 aaPredicted RBP15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 TEX38Q6PEX7 206 aa15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 IL34Q6ZMJ4 242 aa15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 ZNF329Q86UD4 541 aa15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 COMMD1Q8N668 190 aa15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 SFT2D1Q8WV19 159 aa15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 ZNF414Q96IQ9 312 aa15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 PFDN5Q99471 154 aa15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 SLC25A22Q9H936 323 aa15.1■□□□□ 0.01
PDLIM2-205ENST00000397761 MAP1LC3B2A6NCE7 125 aa15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 OR2T8A6NH00 312 aa15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 RD3LP0DJH9 198 aa15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 C10orf99Q6UWK7 81 aa15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 PATE2Q6UY27 113 aa15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 COMMD7Q86VX2 200 aa15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 EIF4E3Q8N5X7 224 aaKnown RBP15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 OR1L4Q8NGR5 311 aa15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 RNF2Q99496 336 aa15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 CHRDL1Q9BU40 450 aa15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 MAP1LC3BQ9GZQ8 125 aa15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 C16orf95Q9H693 158 aa15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 SEPSECSQ9HD40 501 aaKnown RBP15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 DNAJC4Q9NNZ3 241 aa15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 CUBNO60494 3623 aa15.09■□□□□ 0.01
PDLIM2-205ENST00000397761 ELOA3CA0A087WX78 387 aaPredicted RBP15.08■□□□□ 0.01
PDLIM2-205ENST00000397761 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.08■□□□□ 0.01
PDLIM2-205ENST00000397761 OR2C1O95371 312 aa15.08■□□□□ 0.01
PDLIM2-205ENST00000397761 CLEC3BP05452 202 aa15.08■□□□□ 0.01
PDLIM2-205ENST00000397761 ZNF343Q6P1L6 599 aa15.08■□□□□ 0.01
PDLIM2-205ENST00000397761 OR51G1Q8NGK1 321 aa15.08■□□□□ 0.01
PDLIM2-205ENST00000397761 MARC2Q969Z3 335 aa15.08■□□□□ 0.01
PDLIM2-205ENST00000397761 MRPL32Q9BYC8 188 aaKnown RBP15.08■□□□□ 0.01
PDLIM2-205ENST00000397761 FUT9Q9Y231 359 aa15.08■□□□□ 0.01
PDLIM2-205ENST00000397761 JMJD1CQ15652 2540 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 A0A1W2PPV4 95 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 WI2-2373I1.2A0A1W2PRP0 233 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 RAB19A4D1S5 217 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 TEX46H3BTG2 121 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 NUPL2O15504 423 aaKnown RBP15.08■□□□□ 0
PDLIM2-205ENST00000397761 TGOLN2O43493 480 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 STAG3L2P0CL84 134 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 STAG3L3P0CL85 134 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 GPR183P32249 361 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 CCL20P78556 96 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 PMS2P11Q13670 270 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 LCN15Q6UWW0 184 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 CLEC19AQ6UXS0 136 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 ZNF491Q8N8L2 437 aa15.08■□□□□ 0
PDLIM2-205ENST00000397761 WIPF2Q8TF74 440 aaPredicted RBP15.08■□□□□ 0
PDLIM2-205ENST00000397761 COX7A2P2O60397 106 aa15.07■□□□□ 0
PDLIM2-205ENST00000397761 HYPMO75409 117 aa15.07■□□□□ 0
PDLIM2-205ENST00000397761 FAM209BQ5JX69 171 aa15.07■□□□□ 0
PDLIM2-205ENST00000397761 FAM78BQ5VT40 261 aa15.07■□□□□ 0
PDLIM2-205ENST00000397761 C10orf113Q5VZT2 155 aa15.07■□□□□ 0
PDLIM2-205ENST00000397761 SCRT1Q9BWW7 348 aa15.07■□□□□ 0
PDLIM2-205ENST00000397761 NDUFA7O95182 113 aa15.06■□□□□ 0
PDLIM2-205ENST00000397761 CRYBA1P05813 215 aa15.06■□□□□ 0
PDLIM2-205ENST00000397761 SPATA31B1PQ5VZV4 182 aa15.06■□□□□ 0
PDLIM2-205ENST00000397761 ZNF600Q6ZNG1 722 aa15.06■□□□□ 0
PDLIM2-205ENST00000397761 LCNL1Q6ZST4 164 aa15.06■□□□□ 0
PDLIM2-205ENST00000397761 Q8WTZ3 238 aa15.06■□□□□ 0
PDLIM2-205ENST00000397761 MRPL27Q9P0M9 148 aaKnown RBP15.06■□□□□ 0
PDLIM2-205ENST00000397761 MIR17HGQ75NE6 70 aa15.05■□□□□ -0
PDLIM2-205ENST00000397761 RNF125Q96EQ8 232 aa15.05■□□□□ -0
PDLIM2-205ENST00000397761 TCF21O43680 179 aa15.04■□□□□ -0
PDLIM2-205ENST00000397761 EIF3GO75821 320 aaKnown RBP eCLIP15.04■□□□□ -0
PDLIM2-205ENST00000397761 FGF8P55075 233 aaPredicted RBP15.04■□□□□ -0
PDLIM2-205ENST00000397761 KLHDC1Q8N7A1 406 aa15.04■□□□□ -0
PDLIM2-205ENST00000397761 OR1B1Q8NGR6 318 aa15.04■□□□□ -0
PDLIM2-205ENST00000397761 FAM210AQ96ND0 272 aa15.04■□□□□ -0
PDLIM2-205ENST00000397761 DOK5Q9P104 306 aa15.04■□□□□ -0
PDLIM2-205ENST00000397761 HMGB3O15347 200 aaKnown RBP15.03■□□□□ -0
PDLIM2-205ENST00000397761 ATP6V1G1O75348 118 aa15.03■□□□□ -0
PDLIM2-205ENST00000397761 IL4P05112 153 aa15.03■□□□□ -0
PDLIM2-205ENST00000397761 RPLP1P05386 114 aaKnown RBP15.03■□□□□ -0
PDLIM2-205ENST00000397761 ORM2P19652 201 aa15.03■□□□□ -0
PDLIM2-205ENST00000397761 LYZP61626 148 aa15.03■□□□□ -0
PDLIM2-205ENST00000397761 MORN5Q5VZ52 161 aa15.03■□□□□ -0
PDLIM2-205ENST00000397761 OR4X2Q8NGF9 303 aa15.03■□□□□ -0
PDLIM2-205ENST00000397761 FAM167A-AS1Q96KT0 104 aa15.03■□□□□ -0
PDLIM2-205ENST00000397761 UBE2E2Q96LR5 201 aa15.03■□□□□ -0
PDLIM2-205ENST00000397761 UHRF2Q96PU4 802 aa15.03■□□□□ -0
PDLIM2-205ENST00000397761 ZFAND3Q9H8U3 227 aa15.03■□□□□ -0
PDLIM2-205ENST00000397761 TECRQ9NZ01 308 aaKnown RBP15.03■□□□□ -0
PDLIM2-205ENST00000397761 A0A1B0GV50 99 aa15.02■□□□□ -0
PDLIM2-205ENST00000397761 CXorf1O96002 111 aa15.02■□□□□ -0
PDLIM2-205ENST00000397761 IGHV3-11P01762 117 aa15.02■□□□□ -0
PDLIM2-205ENST00000397761 ARL14EPLP0DKL9 152 aa15.02■□□□□ -0
PDLIM2-205ENST00000397761 C8orf88P0DMB2 117 aa15.02■□□□□ -0
PDLIM2-205ENST00000397761 ARL3P36405 182 aa15.02■□□□□ -0
PDLIM2-205ENST00000397761 RELQ04864 619 aaPredicted RBP15.02■□□□□ -0
PDLIM2-205ENST00000397761 USF2Q15853 346 aaPredicted RBP15.02■□□□□ -0
PDLIM2-205ENST00000397761 UQCC3Q6UW78 93 aa15.02■□□□□ -0
PDLIM2-205ENST00000397761 LINC00305Q7Z4B0 112 aa15.02■□□□□ -0
PDLIM2-205ENST00000397761 LINC01006Q8NI28 216 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms