RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 OR2D3Q8NGH3 330 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 TPSG1Q9NRR2 321 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 LOC102723971A0A1B0GUV8 181 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 A8MWL6 223 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 OVOL3O00110 214 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 G3V318 75 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 WDR73Q6P4I2 378 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 PARD6GQ9BYG4 376 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-204ENST00000397606 CPAMD8Q8IZJ3 1885 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 C7orf77A4D0Y5 90 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 FBLL1A6NHQ2 334 aaKnown RBP6.61□□□□□ -1.35
PTPRD-204ENST00000397606 F5H697 171 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 RIGQ13278 110 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 TMEM190Q8WZ59 177 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 DDB2Q92466 427 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 MGST2Q99735 147 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 RARRES2Q99969 163 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 NAT8BQ9UHF3 227 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 GPX1P07203 203 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 WT1-ASQ06250 92 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 AURKAIP1Q9NWT8 199 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-204ENST00000397606 TMEM189A5PLL7 270 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 SPINK4O60575 86 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 OTORQ9NRC9 128 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 LAMA2P24043 3122 aaKnown RBP6.61□□□□□ -1.35
PTPRD-204ENST00000397606 NCKAP5O14513 1909 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 OR4C46A6NHA9 309 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 TOMM40O96008 361 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 ELANEP08246 267 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 IBA57Q5T440 356 aaKnown RBP6.61□□□□□ -1.35
PTPRD-204ENST00000397606 LCNL1Q6ZST4 164 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 TMEM116Q8NCL8 245 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 NPBQ8NG41 125 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 TCEAL7Q9BRU2 100 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 CYTL1Q9NRR1 136 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 KIAA1549Q9HCM3 1950 aa6.61□□□□□ -1.35
PTPRD-204ENST00000397606 LRRK2Q5S007 2527 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 A0A1W2PRE2 83 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 H3BUA1 57 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 TCL1AP56279 114 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 LDLRAD2Q5SZI1 272 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 LEMD1Q68G75 181 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 C3orf56Q8N813 242 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 PARLQ9H300 379 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 Q9H3A6 140 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 TMSB15BA0A087X1C1 80 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 PEX7O00628 323 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 NDUFB8O95169 186 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 CAMPP49913 170 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 SMUG1Q53HV7 270 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 MBD3L1Q8WWY6 194 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 CYYR1Q96J86 154 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 FAM210BQ96KR6 192 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 TRAPPC1Q9Y5R8 145 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 MFSD2BA6NFX1 497 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 RPS20P60866 119 aaKnown RBP6.6□□□□□ -1.35
PTPRD-204ENST00000397606 GCSAMLQ5JQS6 135 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 NOL4LQ96MY1 436 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-204ENST00000397606 SLC25A39Q9BZJ4 359 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-204ENST00000397606 TMEM50AO95807 157 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 PAX9P55771 341 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 CMC4P56277 68 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-204ENST00000397606 NDUFA6P56556 154 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 YPEL3P61236 119 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-204ENST00000397606 SIGLEC15Q6ZMC9 328 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 WFDC11Q8NEX6 87 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 TUBA4BQ9H853 241 aa6.6□□□□□ -1.35
PTPRD-204ENST00000397606 STAG3L2P0CL84 134 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 STAG3L3P0CL85 134 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 MLANAQ16655 118 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 SPANXN1Q5VSR9 72 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 TTC9CQ8N5M4 171 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 FAM24BQ8N5W8 94 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 C20orf202A1L168 122 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 HSBP1L1C9JCN9 74 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 HIST2H2BCQ6DN03 193 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 TCF23Q7RTU1 214 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 GSX1Q9H4S2 264 aaPredicted RBP6.59□□□□□ -1.35
PTPRD-204ENST00000397606 DAZ1Q9NQZ3 744 aaKnown RBP6.59□□□□□ -1.35
PTPRD-204ENST00000397606 CHD3Q12873 2000 aaKnown RBP6.59□□□□□ -1.35
PTPRD-204ENST00000397606 PRUNE2Q8WUY3 3088 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 ZNF98A6NK75 572 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 SCO1O75880 301 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 PYYP10082 97 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 FOXC2Q99958 501 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 ZMAT5Q9UDW3 170 aaKnown RBP6.59□□□□□ -1.35
PTPRD-204ENST00000397606 FAM181BA6NEQ2 426 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 SAP30O75446 220 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 RAB4AP20338 218 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 TCF24Q7RTU0 167 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 ODF3L1Q8IXM7 274 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 FMC1Q96HJ9 113 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 SGK494Q96LW2 274 aa6.59□□□□□ -1.35
PTPRD-204ENST00000397606 DUSP14O95147 198 aaKnown RBP6.58□□□□□ -1.36
PTPRD-204ENST00000397606 IGHV4-31P0DP07 118 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 CENPWQ5EE01 88 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 C12orf54Q6X4T0 127 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 KLHDC1Q8N7A1 406 aa6.58□□□□□ -1.36
PTPRD-204ENST00000397606 TNFRSF13BO14836 293 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms