RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 B2MP61769 119 aa13.07□□□□□ -0.32
TSPAN4-205ENST00000397406 SELENOTP62341 195 aa13.07□□□□□ -0.32
TSPAN4-205ENST00000397406 FFAR4Q5NUL3 377 aa13.07□□□□□ -0.32
TSPAN4-205ENST00000397406 OR4X2Q8NGF9 303 aa13.07□□□□□ -0.32
TSPAN4-205ENST00000397406 ZNF414Q96IQ9 312 aa13.07□□□□□ -0.32
TSPAN4-205ENST00000397406 CHRDL1Q9BU40 450 aa13.07□□□□□ -0.32
TSPAN4-205ENST00000397406 VSIRQ9H7M9 311 aa13.07□□□□□ -0.32
TSPAN4-205ENST00000397406 SLC39A9Q9NUM3 307 aa13.07□□□□□ -0.32
TSPAN4-205ENST00000397406 TGOLN2O43493 480 aa13.06□□□□□ -0.32
TSPAN4-205ENST00000397406 TSPAN15O95858 294 aa13.06□□□□□ -0.32
TSPAN4-205ENST00000397406 ELLP55199 621 aaPredicted RBP13.06□□□□□ -0.32
TSPAN4-205ENST00000397406 YPEL3P61236 119 aaPredicted RBP13.06□□□□□ -0.32
TSPAN4-205ENST00000397406 UBE2E2Q96LR5 201 aa13.06□□□□□ -0.32
TSPAN4-205ENST00000397406 GNB4Q9HAV0 340 aa13.06□□□□□ -0.32
TSPAN4-205ENST00000397406 UMAD1C9J7I0 102 aa13.05□□□□□ -0.32
TSPAN4-205ENST00000397406 PPP5D1E7EU14 171 aa13.05□□□□□ -0.32
TSPAN4-205ENST00000397406 SCGB2A1O75556 95 aa13.05□□□□□ -0.32
TSPAN4-205ENST00000397406 TOMM40O96008 361 aa13.05□□□□□ -0.32
TSPAN4-205ENST00000397406 TRBV12-3P01733 135 aa13.05□□□□□ -0.32
TSPAN4-205ENST00000397406 PSG1P11464 419 aa13.05□□□□□ -0.32
TSPAN4-205ENST00000397406 SPSB3Q6PJ21 355 aa13.05□□□□□ -0.32
TSPAN4-205ENST00000397406 NUPL2O15504 423 aaKnown RBP13.05□□□□□ -0.32
TSPAN4-205ENST00000397406 FABP1P07148 127 aa13.05□□□□□ -0.32
TSPAN4-205ENST00000397406 ZNF616Q08AN1 781 aa13.05□□□□□ -0.32
TSPAN4-205ENST00000397406 GCSAMLQ5JQS6 135 aa13.05□□□□□ -0.32
TSPAN4-205ENST00000397406 AKR1C8PQ5T2L2 129 aa13.05□□□□□ -0.32
TSPAN4-205ENST00000397406 RPRMQ9NS64 109 aa13.05□□□□□ -0.32
TSPAN4-205ENST00000397406 LGALS1P09382 135 aaKnown RBP13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 RD3LP0DJH9 198 aa13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 CD28P10747 220 aa13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 M6PRP20645 277 aa13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 ARL3P36405 182 aa13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 CDX1P47902 265 aaPredicted RBP13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 RAB5CP51148 216 aa13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 PLP1P60201 277 aa13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 RAB2AP61019 212 aa13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 ACOT6Q3I5F7 207 aaPredicted RBP13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 TMEM41BQ5BJD5 291 aa13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 FAM209BQ5JX69 171 aa13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 RNF141Q8WVD5 230 aa13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 OR5B12Q96R08 314 aa13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 CITED1Q99966 193 aa13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 PEF1Q9UBV8 284 aaKnown RBP13.04□□□□□ -0.32
TSPAN4-205ENST00000397406 A0A1B0GUS0 222 aa13.03□□□□□ -0.32
TSPAN4-205ENST00000397406 ANKRD34BA5PLL1 514 aa13.03□□□□□ -0.32
TSPAN4-205ENST00000397406 BMPR1BO00238 502 aa13.03□□□□□ -0.32
TSPAN4-205ENST00000397406 OR2C1O95371 312 aa13.03□□□□□ -0.32
TSPAN4-205ENST00000397406 MBP02144 154 aa13.03□□□□□ -0.32
TSPAN4-205ENST00000397406 FHITP49789 147 aa13.03□□□□□ -0.32
TSPAN4-205ENST00000397406 ZNF600Q6ZNG1 722 aa13.03□□□□□ -0.32
TSPAN4-205ENST00000397406 OR51G1Q8NGK1 321 aa13.03□□□□□ -0.32
TSPAN4-205ENST00000397406 WI2-2373I1.2A0A1W2PRP0 233 aa13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 I3L521 148 aa13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 HIST2H2BDQ6DRA6 164 aa13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 PATE2Q6UY27 113 aa13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 DPPA3Q6W0C5 159 aa13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 Q6ZRG5 221 aa13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 C18orf65Q6ZTR6 163 aa13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 RPP25LQ8N5L8 163 aaKnown RBP13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 OR10G4Q8NGN3 311 aa13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 OR10G9Q8NGN4 311 aa13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 OR10G7Q8NGN6 311 aa13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 Q8WTZ3 238 aa13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 TMEM37Q8WXS4 190 aa13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 PUS1Q9Y606 427 aaKnown RBP eCLIP13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 VWFP04275 2813 aa13.02□□□□□ -0.33
TSPAN4-205ENST00000397406 IGHV3-35A0A0C4DH35 117 aa13.01□□□□□ -0.33
TSPAN4-205ENST00000397406 RELQ04864 619 aaPredicted RBP13.01□□□□□ -0.33
TSPAN4-205ENST00000397406 ZNF726P1Q15940 193 aa13.01□□□□□ -0.33
TSPAN4-205ENST00000397406 PXDC1Q5TGL8 231 aa13.01□□□□□ -0.33
TSPAN4-205ENST00000397406 FAM213BQ8TBF2 198 aa13.01□□□□□ -0.33
TSPAN4-205ENST00000397406 LRRC20Q8TCA0 184 aa13.01□□□□□ -0.33
TSPAN4-205ENST00000397406 C4orf3Q8WVX3 66 aa13.01□□□□□ -0.33
TSPAN4-205ENST00000397406 PCNPQ8WW12 178 aaKnown RBP13.01□□□□□ -0.33
TSPAN4-205ENST00000397406 RNF125Q96EQ8 232 aa13.01□□□□□ -0.33
TSPAN4-205ENST00000397406 ZFAND3Q9H8U3 227 aa13.01□□□□□ -0.33
TSPAN4-205ENST00000397406 DOK5Q9P104 306 aa13.01□□□□□ -0.33
TSPAN4-205ENST00000397406 ZNF705EA8MWA4 302 aaPredicted RBP13□□□□□ -0.33
TSPAN4-205ENST00000397406 SEC14L6B5MCN3 397 aa13□□□□□ -0.33
TSPAN4-205ENST00000397406 GGCTO75223 188 aaKnown RBP13□□□□□ -0.33
TSPAN4-205ENST00000397406 IL4P05112 153 aa13□□□□□ -0.33
TSPAN4-205ENST00000397406 NMBP08949 121 aa13□□□□□ -0.33
TSPAN4-205ENST00000397406 LYZP61626 148 aa13□□□□□ -0.33
TSPAN4-205ENST00000397406 SSX7Q7RTT5 188 aa13□□□□□ -0.33
TSPAN4-205ENST00000397406 C11orf44Q8N8P7 122 aa13□□□□□ -0.33
TSPAN4-205ENST00000397406 OR1L4Q8NGR5 311 aa13□□□□□ -0.33
TSPAN4-205ENST00000397406 GATAD1Q8WUU5 269 aa13□□□□□ -0.33
TSPAN4-205ENST00000397406 SAT2Q96F10 170 aaPredicted RBP13□□□□□ -0.33
TSPAN4-205ENST00000397406 RCC1LQ96I51 464 aaKnown RBP13□□□□□ -0.33
TSPAN4-205ENST00000397406 PFDN5Q99471 154 aa13□□□□□ -0.33
TSPAN4-205ENST00000397406 CITED2Q99967 270 aaPredicted RBP13□□□□□ -0.33
TSPAN4-205ENST00000397406 COX7A2P2O60397 106 aa12.99□□□□□ -0.33
TSPAN4-205ENST00000397406 HYPMO75409 117 aa12.99□□□□□ -0.33
TSPAN4-205ENST00000397406 OR5G3P0C626 314 aa12.99□□□□□ -0.33
TSPAN4-205ENST00000397406 ORM2P19652 201 aa12.99□□□□□ -0.33
TSPAN4-205ENST00000397406 USF2Q15853 346 aaPredicted RBP12.99□□□□□ -0.33
TSPAN4-205ENST00000397406 KHDC1LQ5JSQ8 128 aa12.99□□□□□ -0.33
TSPAN4-205ENST00000397406 FAM122CQ6P4D5 195 aa12.99□□□□□ -0.33
TSPAN4-205ENST00000397406 TOMM20LQ6UXN7 152 aa12.99□□□□□ -0.33
TSPAN4-205ENST00000397406 OR1B1Q8NGR6 318 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms