RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 OR5AU1Q8NGC0 362 aa9.64□□□□□ -0.87
ITGB1-202ENST00000396033 BBC3Q96PG8 261 aaPredicted RBP9.64□□□□□ -0.87
ITGB1-202ENST00000396033 ELOA3CA0A087WX78 387 aaPredicted RBP9.64□□□□□ -0.87
ITGB1-202ENST00000396033 TSTD3H0UI37 97 aa9.64□□□□□ -0.87
ITGB1-202ENST00000396033 TDRG1Q3Y452 100 aa9.64□□□□□ -0.87
ITGB1-202ENST00000396033 ZNF355PQ9NSJ1 428 aa9.64□□□□□ -0.87
ITGB1-202ENST00000396033 UBE2L3P68036 154 aaKnown RBP9.64□□□□□ -0.87
ITGB1-202ENST00000396033 PATE2Q6UY27 113 aa9.64□□□□□ -0.87
ITGB1-202ENST00000396033 AURKAIP1Q9NWT8 199 aaPredicted RBP9.64□□□□□ -0.87
ITGB1-202ENST00000396033 MYO18BQ8IUG5 2567 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 H7BYZ3 331 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 ORM2P19652 201 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 LINC01551Q86U37 167 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 Q8N6K4 173 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 OR1B1Q8NGR6 318 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 FAM210BQ96KR6 192 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 FAM167A-AS1Q96KT0 104 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 TMEM208Q9BTX3 173 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 NUPR1O60356 82 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 SAA4P35542 130 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 ATP5J2P56134 94 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 TMEM183AQ8IXX5 376 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 NECAP1Q8NC96 275 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 SPOCK3Q9BQ16 436 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 GSX1Q9H4S2 264 aaPredicted RBP9.63□□□□□ -0.87
ITGB1-202ENST00000396033 I3L2K1 104 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 ARPC1AQ92747 370 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 C11orf52Q96A22 123 aa9.63□□□□□ -0.87
ITGB1-202ENST00000396033 IGHV4-61A0A0C4DH41 118 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 PGPEP1LA6NFU8 196 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 EBI3Q14213 229 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 LBHQ53QV2 105 aaPredicted RBP9.62□□□□□ -0.87
ITGB1-202ENST00000396033 CLEC2AQ6UVW9 174 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 LINC00305Q7Z4B0 112 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 ANAPC16Q96DE5 110 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 CX3CL1P78423 397 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 USF2Q15853 346 aaPredicted RBP9.62□□□□□ -0.87
ITGB1-202ENST00000396033 C10orf105Q8TEF2 133 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 OR5B12Q96R08 314 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 PAXXQ9BUH6 204 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 TRBV20OR9-2A0A075B6H5 130 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 FAM106CPP0CH98 169 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 PYYP10082 97 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 CD33P20138 364 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 RAB4AP20338 218 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 ZNF562Q6V9R5 426 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 OR1L6Q8NGR2 347 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 PERPQ96FX8 193 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 PPP1R14DQ9NXH3 145 aa9.62□□□□□ -0.87
ITGB1-202ENST00000396033 GGTLC3B5MD39 225 aa9.61□□□□□ -0.87
ITGB1-202ENST00000396033 HNF1AP20823 631 aa9.61□□□□□ -0.87
ITGB1-202ENST00000396033 GALR1P47211 349 aa9.61□□□□□ -0.87
ITGB1-202ENST00000396033 NDPQ00604 133 aa9.61□□□□□ -0.87
ITGB1-202ENST00000396033 FAM120AOSQ5T036 256 aa9.61□□□□□ -0.87
ITGB1-202ENST00000396033 AJUBAQ96IF1 538 aa9.61□□□□□ -0.87
ITGB1-202ENST00000396033 ELOVL1Q9BW60 279 aa9.61□□□□□ -0.87
ITGB1-202ENST00000396033 POLR3KQ9Y2Y1 108 aaPredicted RBP9.61□□□□□ -0.87
ITGB1-202ENST00000396033 K7EIM0 57 aa9.61□□□□□ -0.87
ITGB1-202ENST00000396033 NDUFS8O00217 210 aa9.61□□□□□ -0.87
ITGB1-202ENST00000396033 NPFFO15130 113 aa9.61□□□□□ -0.87
ITGB1-202ENST00000396033 IGLC1P0CG04 106 aa9.61□□□□□ -0.87
ITGB1-202ENST00000396033 ZNF25P17030 456 aaPredicted RBP9.61□□□□□ -0.87
ITGB1-202ENST00000396033 BRS3P32247 399 aa9.61□□□□□ -0.87
ITGB1-202ENST00000396033 RASL11BQ9BPW5 248 aa9.61□□□□□ -0.87
ITGB1-202ENST00000396033 ZNF462Q96JM2 2506 aa9.6□□□□□ -0.87
ITGB1-202ENST00000396033 A0A1W2PRE2 83 aa9.6□□□□□ -0.87
ITGB1-202ENST00000396033 HYPMO75409 117 aa9.6□□□□□ -0.87
ITGB1-202ENST00000396033 CRYBB3P26998 211 aa9.6□□□□□ -0.87
ITGB1-202ENST00000396033 KLF17Q5JT82 389 aaPredicted RBP9.6□□□□□ -0.87
ITGB1-202ENST00000396033 SUMO1P63165 101 aaKnown RBP9.6□□□□□ -0.87
ITGB1-202ENST00000396033 TIGITQ495A1 244 aa9.6□□□□□ -0.87
ITGB1-202ENST00000396033 ZNF843Q8N446 348 aa9.6□□□□□ -0.87
ITGB1-202ENST00000396033 C1RLQ9NZP8 487 aa9.6□□□□□ -0.87
ITGB1-202ENST00000396033 MDFIC2A0A1B0GVS7 189 aa9.6□□□□□ -0.87
ITGB1-202ENST00000396033 LYZP61626 148 aa9.6□□□□□ -0.87
ITGB1-202ENST00000396033 ASPHD1Q5U4P2 390 aa9.6□□□□□ -0.87
ITGB1-202ENST00000396033 TRBV24-1A0A075B6N3 115 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 CENPVL3A0A0U1RRI6 287 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 NPIPB5A8MRT5 1133 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 VWC2LB2RUY7 222 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 PSG1P11464 419 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 PIP4P2Q8N4L2 257 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 SVEP1Q4LDE5 3571 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 IGHV4-30-2A0A087WSY4 118 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 PFN1P07737 140 aaKnown RBP9.59□□□□□ -0.87
ITGB1-202ENST00000396033 PCP4P48539 62 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 COA6Q5JTJ3 125 aaKnown RBP9.59□□□□□ -0.87
ITGB1-202ENST00000396033 Q8N9W7 124 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 ABCA2Q9BZC7 2435 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 ABCA1O95477 2261 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 CD99P14209 185 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 PAX8Q06710 450 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 OCC1Q8TAD7 63 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 FXYD5Q96DB9 178 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 SFRP2Q96HF1 295 aa9.59□□□□□ -0.87
ITGB1-202ENST00000396033 NOL4LQ96MY1 436 aaPredicted RBP9.59□□□□□ -0.87
ITGB1-202ENST00000396033 IGHV3OR16-10A0A075B7F0 116 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 C9JCJ5 164 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 PLP1P60201 277 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 CLEC12BQ2HXU8 276 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms