RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ZNF331Q9NQX6 463 aaPredicted RBP12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 PHOX2AO14813 284 aa12.73□□□□□ -0.37
SMARCD1-202ENST00000394963 SMAD7O15105 426 aaKnown RBP12.73□□□□□ -0.37
SMARCD1-202ENST00000394963 NPPCP23582 126 aa12.73□□□□□ -0.37
SMARCD1-202ENST00000394963 OR2D3Q8NGH3 330 aa12.73□□□□□ -0.37
SMARCD1-202ENST00000394963 GGACTQ9BVM4 153 aa12.73□□□□□ -0.37
SMARCD1-202ENST00000394963 A0A1B0GUS0 222 aa12.73□□□□□ -0.37
SMARCD1-202ENST00000394963 HIST1H1BP16401 226 aaKnown RBP12.73□□□□□ -0.37
SMARCD1-202ENST00000394963 FBXL7Q9UJT9 491 aa12.73□□□□□ -0.37
SMARCD1-202ENST00000394963 SOX21Q9Y651 276 aaPredicted RBP12.73□□□□□ -0.37
SMARCD1-202ENST00000394963 WFDC3Q8IUB2 231 aa12.73□□□□□ -0.37
SMARCD1-202ENST00000394963 OR4A5Q8NH83 315 aa12.73□□□□□ -0.37
SMARCD1-202ENST00000394963 THYN1Q9P016 225 aa12.73□□□□□ -0.37
SMARCD1-202ENST00000394963 KAAG1Q9UBP8 84 aa12.73□□□□□ -0.37
SMARCD1-202ENST00000394963 TRAV1-1A0A0B4J248 108 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 ZNF98A6NK75 572 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 A6NNC1 897 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 COX6B1P14854 86 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 TMEM30BQ3MIR4 351 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 IBA57Q5T440 356 aaKnown RBP12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 CLEC19AQ6UXS0 136 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 PIMREGQ9BSJ6 248 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 B4DEV8 164 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 PMCHP20382 165 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 LINC01551Q86U37 167 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 TCRBV4S1A1TA0A5B7 111 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 GATCO43716 136 aaKnown RBP12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 MFAP2P55001 183 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 RPL15P61313 204 aaKnown RBP12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 Q8N7P7 452 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 C1RLQ9NZP8 487 aa12.72□□□□□ -0.37
SMARCD1-202ENST00000394963 CSN3P07498 182 aa12.71□□□□□ -0.37
SMARCD1-202ENST00000394963 PAX5Q02548 391 aa12.71□□□□□ -0.37
SMARCD1-202ENST00000394963 USF2Q15853 346 aaPredicted RBP12.71□□□□□ -0.37
SMARCD1-202ENST00000394963 CR1LQ2VPA4 569 aa12.71□□□□□ -0.37
SMARCD1-202ENST00000394963 SERTM2A0A1B0GWG4 89 aa12.71□□□□□ -0.38
SMARCD1-202ENST00000394963 CD33P20138 364 aa12.71□□□□□ -0.38
SMARCD1-202ENST00000394963 TFPI2P48307 235 aa12.71□□□□□ -0.38
SMARCD1-202ENST00000394963 C10orf91Q5T1B1 145 aa12.71□□□□□ -0.38
SMARCD1-202ENST00000394963 HIST2H2BCQ6DN03 193 aa12.71□□□□□ -0.38
SMARCD1-202ENST00000394963 ZNF841Q6ZN19 808 aa12.71□□□□□ -0.38
SMARCD1-202ENST00000394963 ZNF329Q86UD4 541 aa12.71□□□□□ -0.38
SMARCD1-202ENST00000394963 TEX45Q8NA69 505 aa12.71□□□□□ -0.38
SMARCD1-202ENST00000394963 OR1L6Q8NGR2 347 aa12.71□□□□□ -0.38
SMARCD1-202ENST00000394963 FAM90A9PA6NNJ1 464 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 M0R3E3 92 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 PRTN3P24158 256 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 COMPP49747 757 aaPredicted RBP12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 MEOX2P50222 304 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 SELENOTP62341 195 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 CACNG8Q8WXS5 425 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 ITGB1BP1O14713 200 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 HIST1H2BKO60814 126 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 HIST1H2BJP06899 126 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 HIST1H2BOP23527 126 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 HIST1H2BBP33778 126 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 HIST1H2BDP58876 126 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 HIST1H2BCP62807 126 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 HIST2H2BEQ16778 126 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 RPEL1Q2QD12 228 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 LDLRAD2Q5SZI1 272 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 DYNAPQ8N1N2 210 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 HIST1H2BHQ93079 126 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 HIST1H2BNQ99877 126 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 HIST1H2BMQ99879 126 aa12.7□□□□□ -0.38
SMARCD1-202ENST00000394963 CTRB1P17538 263 aa12.69□□□□□ -0.38
SMARCD1-202ENST00000394963 C5orf64Q2M2E5 130 aa12.69□□□□□ -0.38
SMARCD1-202ENST00000394963 CTRB2Q6GPI1 263 aa12.69□□□□□ -0.38
SMARCD1-202ENST00000394963 SCGB2A1O75556 95 aa12.69□□□□□ -0.38
SMARCD1-202ENST00000394963 C21orf62Q9NYP8 219 aa12.69□□□□□ -0.38
SMARCD1-202ENST00000394963 ZANQ9Y493 2812 aa12.69□□□□□ -0.38
SMARCD1-202ENST00000394963 IGHV4-61A0A0C4DH41 118 aa12.69□□□□□ -0.38
SMARCD1-202ENST00000394963 CLEC3BP05452 202 aa12.69□□□□□ -0.38
SMARCD1-202ENST00000394963 C11orf42Q8N5U0 333 aa12.69□□□□□ -0.38
SMARCD1-202ENST00000394963 RNASEH2CQ8TDP1 164 aaKnown RBP12.69□□□□□ -0.38
SMARCD1-202ENST00000394963 HIF1ANQ9NWT6 349 aa12.69□□□□□ -0.38
SMARCD1-202ENST00000394963 IGLC7A0M8Q6 106 aa12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 ISLRO14498 428 aa12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 IGLV1-47P01700 117 aa12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 GZMBP10144 247 aa12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 AAMDCQ9H7C9 122 aa12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 GGTLC3B5MD39 225 aa12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 IGHV4-39P01824 125 aa12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 FABP1P07148 127 aa12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 CSN1S1P47710 185 aa12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 KDF1Q8NAX2 398 aaPredicted RBP12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 ANAPC16Q96DE5 110 aa12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 NACAE9PAV3 2078 aa12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 MFAP4P55083 255 aa12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 ST6GALNAC6Q969X2 333 aa12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 F11RQ9Y624 299 aaKnown RBP12.68□□□□□ -0.38
SMARCD1-202ENST00000394963 CT45A10P0DMU9 189 aa12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 SRD5A1P18405 259 aa12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 S100A12P80511 92 aa12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 NDPQ00604 133 aa12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 SSBP4Q9BWG4 385 aaPredicted RBP12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 IGLV2-23P01705 113 aa12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 RHOGP84095 191 aa12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 C11orf44Q8N8P7 122 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms