RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 LIME1Q9H400 295 aa7.46□□□□□ -1.21
CDH11-202ENST00000394156 EFNB3Q15768 340 aa7.46□□□□□ -1.21
CDH11-202ENST00000394156 LDLRAD2Q5SZI1 272 aa7.46□□□□□ -1.21
CDH11-202ENST00000394156 CIARTQ8N365 385 aaPredicted RBP7.46□□□□□ -1.21
CDH11-202ENST00000394156 OR4D5Q8NGN0 318 aa7.46□□□□□ -1.21
CDH11-202ENST00000394156 TXNDC17Q9BRA2 123 aa7.46□□□□□ -1.21
CDH11-202ENST00000394156 SLC25A39Q9BZJ4 359 aaPredicted RBP7.46□□□□□ -1.21
CDH11-202ENST00000394156 NAPSAO96009 420 aa7.46□□□□□ -1.22
CDH11-202ENST00000394156 SRP19P09132 144 aaKnown RBP7.46□□□□□ -1.22
CDH11-202ENST00000394156 SNRPD3P62318 126 aaKnown RBP7.46□□□□□ -1.22
CDH11-202ENST00000394156 PSG9Q00887 426 aa7.46□□□□□ -1.22
CDH11-202ENST00000394156 UBE2E2Q96LR5 201 aa7.46□□□□□ -1.22
CDH11-202ENST00000394156 YTHDF2Q9Y5A9 579 aaKnown RBP7.46□□□□□ -1.22
CDH11-202ENST00000394156 Q6ZS92 163 aa7.46□□□□□ -1.22
CDH11-202ENST00000394156 KCNS1Q96KK3 526 aa7.46□□□□□ -1.22
CDH11-202ENST00000394156 IGKV1-6A0A0C4DH72 117 aa7.46□□□□□ -1.22
CDH11-202ENST00000394156 TNFSF13O75888 250 aa7.46□□□□□ -1.22
CDH11-202ENST00000394156 AREGP15514 252 aa7.46□□□□□ -1.22
CDH11-202ENST00000394156 FAM89BQ8N5H3 189 aa7.46□□□□□ -1.22
CDH11-202ENST00000394156 EIF4E3Q8N5X7 224 aaKnown RBP7.46□□□□□ -1.22
CDH11-202ENST00000394156 SAA4P35542 130 aa7.45□□□□□ -1.22
CDH11-202ENST00000394156 CFHR3Q02985 330 aa7.45□□□□□ -1.22
CDH11-202ENST00000394156 A0A0U1RRA0 63 aa7.45□□□□□ -1.22
CDH11-202ENST00000394156 MPDU1O75352 247 aa7.45□□□□□ -1.22
CDH11-202ENST00000394156 CA7P43166 264 aa7.45□□□□□ -1.22
CDH11-202ENST00000394156 RSPO1Q2MKA7 263 aaPredicted RBP7.45□□□□□ -1.22
CDH11-202ENST00000394156 PSMG4Q5JS54 123 aa7.45□□□□□ -1.22
CDH11-202ENST00000394156 OSR1Q8TAX0 266 aaPredicted RBP7.45□□□□□ -1.22
CDH11-202ENST00000394156 BUB1B-PAK6H3BSN5 160 aa7.45□□□□□ -1.22
CDH11-202ENST00000394156 CEACAM4O75871 244 aa7.45□□□□□ -1.22
CDH11-202ENST00000394156 SSBP2P81877 361 aaPredicted RBP7.45□□□□□ -1.22
CDH11-202ENST00000394156 TCTEX1D1Q8N7M0 179 aa7.45□□□□□ -1.22
CDH11-202ENST00000394156 PLSCR2Q9NRY7 297 aa7.45□□□□□ -1.22
CDH11-202ENST00000394156 SRRM5B3KS81 715 aa7.45□□□□□ -1.22
CDH11-202ENST00000394156 G3V318 75 aa7.45□□□□□ -1.22
CDH11-202ENST00000394156 HIST2H2BCQ6DN03 193 aa7.45□□□□□ -1.22
CDH11-202ENST00000394156 FAM90A26D6RGX4 464 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 NCR2O95944 276 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 TCF21O43680 179 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 SELENOTP62341 195 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 OCC1Q8TAD7 63 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 H0YJW9 148 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 APOHP02749 345 aaPredicted RBP7.44□□□□□ -1.22
CDH11-202ENST00000394156 PSG1P11464 419 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 RPL23P62829 140 aaKnown RBP7.44□□□□□ -1.22
CDH11-202ENST00000394156 VCANP13611 3396 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 TRAV8-6A0A0B4J262 113 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 SMIM6P0DI80 62 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 RPL24P83731 157 aaKnown RBP7.44□□□□□ -1.22
CDH11-202ENST00000394156 FAM209BQ5JX69 171 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 NOTCH3Q9UM47 2321 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 ARHGAP32A7KAX9 2087 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 LOC107984156A0A0G2JMH3 177 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 MBD3L4A6NDZ8 208 aaPredicted RBP7.44□□□□□ -1.22
CDH11-202ENST00000394156 MBD3L3A6NE82 208 aaPredicted RBP7.44□□□□□ -1.22
CDH11-202ENST00000394156 MBD3L5A6NJ08 208 aaPredicted RBP7.44□□□□□ -1.22
CDH11-202ENST00000394156 SMKR1H3BMG3 65 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 SPRY2O43597 315 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 LEPROTL1O95214 131 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 NRN1LQ496H8 165 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 ARL17AQ8IVW1 177 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 STHQ8IWL8 128 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 MBD3L2Q8NHZ7 208 aaPredicted RBP7.44□□□□□ -1.22
CDH11-202ENST00000394156 RAX2Q96IS3 184 aa7.44□□□□□ -1.22
CDH11-202ENST00000394156 PRSS2P07478 247 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 TPTE2P1Q5T6R2 138 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 RNF125Q96EQ8 232 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 GALNT14Q96FL9 552 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 NPFFO15130 113 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 SAP30O75446 220 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 ZNF688P0C7X2 276 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 ZNF506Q5JVG8 444 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 TREML4Q6UXN2 200 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 SYT8Q8NBV8 401 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 BEND2Q8NDZ0 799 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 TMEM191AQ9H0A3 160 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 MSRB2Q9Y3D2 182 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 TRAV12-3A0A0B4J271 114 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 FCN3O75636 299 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 FAM162BQ5T6X4 162 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 OR4X2Q8NGF9 303 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 MAP1LC3AQ9H492 121 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 ELOA3CA0A087WX78 387 aaPredicted RBP7.43□□□□□ -1.22
CDH11-202ENST00000394156 DEFB121Q5J5C9 76 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 TRAV30A0A087WSZ9 112 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 CXCL1P09341 107 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 ZNF138P52744 262 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 ACTL10Q5JWF8 245 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 C1orf122Q6ZSJ8 110 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 TOMM7Q9P0U1 55 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 RITA1Q96K30 269 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 TBL2Q9Y4P3 447 aaKnown RBP7.43□□□□□ -1.22
CDH11-202ENST00000394156 FAM215AQ9Y5M1 114 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 MUC6Q6W4X9 2439 aa7.43□□□□□ -1.22
CDH11-202ENST00000394156 MEF2CQ06413 473 aaPredicted RBP7.42□□□□□ -1.22
CDH11-202ENST00000394156 TMEM170BQ5T4T1 132 aa7.42□□□□□ -1.22
CDH11-202ENST00000394156 TMEM95Q3KNT9 176 aa7.42□□□□□ -1.22
CDH11-202ENST00000394156 FOXC2Q99958 501 aa7.42□□□□□ -1.22
CDH11-202ENST00000394156 GGACTQ9BVM4 153 aa7.42□□□□□ -1.22
CDH11-202ENST00000394156 CYTL1Q9NRR1 136 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms