RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 MNX1P50219 401 aaPredicted RBP9.72□□□□□ -0.85
NPHP4-202ENST00000378161 WFDC3Q8IUB2 231 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 S1PR3Q99500 378 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 OCIAD1Q9NX40 245 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 LOXL2Q9Y4K0 774 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 EPOPA6NHQ4 379 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 FOXI3A8MTJ6 420 aaPredicted RBP9.72□□□□□ -0.85
NPHP4-202ENST00000378161 LINC01545Q5VT33 79 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 LCNL1Q6ZST4 164 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 VWCEQ96DN2 955 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 RRHO14718 337 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 ORM2P19652 201 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 TMEM42Q69YG0 159 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 LIME1Q9H400 295 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 DPM2O94777 84 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 CKS2P33552 79 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 INSL3P51460 131 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 ZNF718Q3SXZ3 478 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 OR13A1Q8NGR1 328 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 CYYR1Q96J86 154 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 FOXC2Q99958 501 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 DEFB127Q9H1M4 99 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 RPP21Q9H633 154 aaKnown RBP9.71□□□□□ -0.85
NPHP4-202ENST00000378161 PKIGQ9Y2B9 76 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 IGKV1D-43A0A0B4J1Z2 117 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 NPIPB6E9PJ23 425 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 FRMD6-AS1P0C7T7 363 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 LGALS9BQ3B8N2 356 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 LGALS9CQ6DKI2 356 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 MAFAQ8NHW3 353 aaPredicted RBP9.71□□□□□ -0.85
NPHP4-202ENST00000378161 KIR2DL4Q99706 377 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 MGST2Q99735 147 aa9.71□□□□□ -0.85
NPHP4-202ENST00000378161 SDK2Q58EX2 2172 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A10PA6NDY2 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A18PA6NE21 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A16PA6NEW6 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A20PA6NIJ5 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A8PA6NJQ4 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A7PA6NKC0 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A22PA8MWA6 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A12PA8MX19 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A5PA8MXJ8 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A23PA8MXZ1 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 RHODO00212 210 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 IGKCP01834 107 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A15PP0C7V4 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A13PP0C7W8 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A14PP0C7W9 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 FAM90A24PP0C7X0 464 aa9.71□□□□□ -0.86
NPHP4-202ENST00000378161 GPR179Q6PRD1 2367 aa9.7□□□□□ -0.86
NPHP4-202ENST00000378161 TCRBV4S1A1TA0A5B7 111 aa9.7□□□□□ -0.86
NPHP4-202ENST00000378161 MOB3BQ86TA1 216 aa9.7□□□□□ -0.86
NPHP4-202ENST00000378161 GTSCR1Q86UQ5 136 aa9.7□□□□□ -0.86
NPHP4-202ENST00000378161 SMRP1Q8NCR6 262 aa9.7□□□□□ -0.86
NPHP4-202ENST00000378161 SNRNP40Q96DI7 357 aaKnown RBP9.7□□□□□ -0.86
NPHP4-202ENST00000378161 WDR83OSQ9Y284 106 aa9.7□□□□□ -0.86
NPHP4-202ENST00000378161 TMEM14EPQ6UXP3 125 aa9.7□□□□□ -0.86
NPHP4-202ENST00000378161 LINC00596Q86U02 117 aa9.7□□□□□ -0.86
NPHP4-202ENST00000378161 PCP2Q8IVA1 136 aa9.7□□□□□ -0.86
NPHP4-202ENST00000378161 MDC1Q14676 2089 aaKnown RBP9.7□□□□□ -0.86
NPHP4-202ENST00000378161 BEX4Q9NWD9 120 aaPredicted RBP9.7□□□□□ -0.86
NPHP4-202ENST00000378161 A0A1B0GUT8 65 aa9.7□□□□□ -0.86
NPHP4-202ENST00000378161 LINC00694P0DN24 101 aa9.7□□□□□ -0.86
NPHP4-202ENST00000378161 TAL2Q16559 108 aa9.7□□□□□ -0.86
NPHP4-202ENST00000378161 NXT2Q9NPJ8 142 aaKnown RBP9.7□□□□□ -0.86
NPHP4-202ENST00000378161 SSUH2Q9Y2M2 353 aa9.7□□□□□ -0.86
NPHP4-202ENST00000378161 SMIM27A0A1W2PRY6 76 aa9.69□□□□□ -0.86
NPHP4-202ENST00000378161 J3QT63 122 aa9.69□□□□□ -0.86
NPHP4-202ENST00000378161 FGF12P61328 243 aa9.69□□□□□ -0.86
NPHP4-202ENST00000378161 IGHV5-10-1A0A0J9YXX1 117 aa9.69□□□□□ -0.86
NPHP4-202ENST00000378161 C8orf88P0DMB2 117 aa9.69□□□□□ -0.86
NPHP4-202ENST00000378161 UCNP55089 124 aa9.69□□□□□ -0.86
NPHP4-202ENST00000378161 FAM19A5Q7Z5A7 132 aaPredicted RBP9.69□□□□□ -0.86
NPHP4-202ENST00000378161 FOXC1Q12948 553 aa9.69□□□□□ -0.86
NPHP4-202ENST00000378161 PLGLAQ15195 96 aa9.69□□□□□ -0.86
NPHP4-202ENST00000378161 C10orf128Q5T292 105 aa9.69□□□□□ -0.86
NPHP4-202ENST00000378161 MOGAT3Q86VF5 341 aa9.69□□□□□ -0.86
NPHP4-202ENST00000378161 E9PLD3 99 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 K7EN84 100 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 SUB1P53999 127 aaKnown RBP eCLIP9.68□□□□□ -0.86
NPHP4-202ENST00000378161 LINC00479Q96M42 142 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 PAXXQ9BUH6 204 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 FLYWCH2Q96CP2 140 aaKnown RBP9.68□□□□□ -0.86
NPHP4-202ENST00000378161 TM2D2Q9BX73 214 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 DNAJC13O75165 2243 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 IGKV1D-13A0A0B4J2D9 117 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 IGKV1-13P0DP09 117 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 SEC61GP60059 68 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 Q8TCH9 128 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 DYSFO75923 2080 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 M0R3E3 92 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 THBDP07204 575 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 C2orf91Q6ZV80 131 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 RFESDQ8TAC1 157 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 ZNF747Q9BV97 191 aa9.68□□□□□ -0.86
NPHP4-202ENST00000378161 ESPL1Q14674 2120 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 LINC01549A6NIU2 74 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 ZC2HC1BQ5TFG8 222 aa9.67□□□□□ -0.86
NPHP4-202ENST00000378161 WIPF2Q8TF74 440 aaPredicted RBP9.67□□□□□ -0.86
NPHP4-202ENST00000378161 RNF125Q96EQ8 232 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms