RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 CRXO43186 299 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-203ENST00000375274 C3orf79P0CE67 100 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 PAX9P55771 341 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 LCN12Q6JVE5 192 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 SCGB3A1Q96QR1 104 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 IGHV2-5P01817 119 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 ZNF56Q15929 161 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 MRPL16Q9NX20 251 aaKnown RBP9.5□□□□□ -0.89
PTCH1-203ENST00000375274 TRGV3P03979 118 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 TSPOP30536 169 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 PAPPA-AS1Q5QFB9 102 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 DDB2Q92466 427 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 CACNG7P62955 275 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 LDLRAD2Q5SZI1 272 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 C8orf46Q8TAG6 207 aa9.5□□□□□ -0.89
PTCH1-203ENST00000375274 A0A1B0GWB2 263 aa9.49□□□□□ -0.89
PTCH1-203ENST00000375274 PPP1R17O96001 155 aa9.49□□□□□ -0.89
PTCH1-203ENST00000375274 IL15RAQ13261 267 aa9.49□□□□□ -0.89
PTCH1-203ENST00000375274 ABHD17AQ96GS6 310 aa9.49□□□□□ -0.89
PTCH1-203ENST00000375274 PLSCR4Q9NRQ2 329 aa9.49□□□□□ -0.89
PTCH1-203ENST00000375274 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-203ENST00000375274 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
PTCH1-203ENST00000375274 A8MWP6 167 aa9.49□□□□□ -0.89
PTCH1-203ENST00000375274 MLNRO43193 412 aa9.49□□□□□ -0.89
PTCH1-203ENST00000375274 CD24P25063 80 aa9.49□□□□□ -0.89
PTCH1-203ENST00000375274 ASIPP42127 132 aa9.49□□□□□ -0.89
PTCH1-203ENST00000375274 OR5AN1Q8NGI8 311 aa9.49□□□□□ -0.89
PTCH1-203ENST00000375274 COL4A6Q14031 1691 aa9.49□□□□□ -0.89
PTCH1-203ENST00000375274 MYOD1P15172 320 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 RSPO1Q2MKA7 263 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-203ENST00000375274 CRIM1Q9NZV1 1036 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 IGKV3-20P01619 116 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 PPBPP02775 128 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 LEPP41159 167 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 SMAGPQ0VAQ4 97 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 SLC25A48Q6ZT89 311 aaKnown RBP9.48□□□□□ -0.89
PTCH1-203ENST00000375274 ASCL2Q99929 193 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 BDP1A6H8Y1 2624 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 FAM181BA6NEQ2 426 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 IGHV2-70P01814 119 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 SFTPCP11686 197 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 OR4X2Q8NGF9 303 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 IFI27L1Q96BM0 104 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 ATRXP46100 2492 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 IGHV3OR16-10A0A075B7F0 116 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 CLEC19AQ6UXS0 136 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 LHFPL4Q7Z7J7 247 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 RNASE6Q93091 150 aaKnown RBP9.48□□□□□ -0.89
PTCH1-203ENST00000375274 FNDC4Q9H6D8 234 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-203ENST00000375274 NHP2Q9NX24 153 aaKnown RBP9.48□□□□□ -0.89
PTCH1-203ENST00000375274 JKAMPQ9P055 326 aa9.48□□□□□ -0.89
PTCH1-203ENST00000375274 PMS2P5A8MQ11 134 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 PSG1P11464 419 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 TMPRSS3P57727 454 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 ADIPOQQ15848 244 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 PRSS8Q16651 343 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 NXT2Q9NPJ8 142 aaKnown RBP9.47□□□□□ -0.89
PTCH1-203ENST00000375274 NUP35Q8NFH5 326 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 OR2K2Q8NGT1 345 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 TMEM167AQ8TBQ9 72 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 BEX4Q9NWD9 120 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-203ENST00000375274 LYNX1G3V0Z9 82 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 APOMO95445 188 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 TCRAP04437 139 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 LYNX1P0DP58 116 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 CSRP1P21291 193 aaKnown RBP9.47□□□□□ -0.89
PTCH1-203ENST00000375274 C19orf54Q5BKX5 351 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 ORAOV1Q8WV07 137 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 MS4A6AQ9H2W1 248 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 IGKV1D-17A0A075B6S4 117 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-203ENST00000375274 TIMM23O14925 209 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 PRR31Q5SQ13 230 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 TNFRSF14Q92956 283 aa9.47□□□□□ -0.89
PTCH1-203ENST00000375274 GTF3C1Q12789 2109 aa9.46□□□□□ -0.89
PTCH1-203ENST00000375274 EREGO14944 169 aa9.46□□□□□ -0.89
PTCH1-203ENST00000375274 CEACAM4O75871 244 aa9.46□□□□□ -0.89
PTCH1-203ENST00000375274 SNRPD3P62318 126 aaKnown RBP9.46□□□□□ -0.89
PTCH1-203ENST00000375274 SEC11AP67812 179 aa9.46□□□□□ -0.89
PTCH1-203ENST00000375274 CIRBPQ14011 172 aaKnown RBP9.46□□□□□ -0.89
PTCH1-203ENST00000375274 AMMECR1LQ6DCA0 310 aa9.46□□□□□ -0.89
PTCH1-203ENST00000375274 EXOC3-AS1Q8N2X6 119 aa9.46□□□□□ -0.89
PTCH1-203ENST00000375274 NEU4Q8WWR8 484 aaPredicted RBP9.46□□□□□ -0.89
PTCH1-203ENST00000375274 GEMIN7Q9H840 131 aaKnown RBP9.46□□□□□ -0.89
PTCH1-203ENST00000375274 MRPL27Q9P0M9 148 aaKnown RBP9.46□□□□□ -0.89
PTCH1-203ENST00000375274 SLC25A15Q9Y619 301 aa9.46□□□□□ -0.89
PTCH1-203ENST00000375274 TYMSP04818 313 aa9.46□□□□□ -0.89
PTCH1-203ENST00000375274 SLC50A1Q9BRV3 221 aa9.46□□□□□ -0.89
PTCH1-203ENST00000375274 MEGF9Q9H1U4 602 aa9.46□□□□□ -0.89
PTCH1-203ENST00000375274 A0A1B0GUS0 222 aa9.46□□□□□ -0.9
PTCH1-203ENST00000375274 NPIPB5A8MRT5 1133 aa9.46□□□□□ -0.9
PTCH1-203ENST00000375274 NDUFA3O95167 84 aa9.46□□□□□ -0.9
PTCH1-203ENST00000375274 PPIFP30405 207 aaKnown RBP9.46□□□□□ -0.9
PTCH1-203ENST00000375274 MDS2Q8NDY4 140 aa9.46□□□□□ -0.9
PTCH1-203ENST00000375274 MALRD1Q5VYJ5 2156 aa9.46□□□□□ -0.9
PTCH1-203ENST00000375274 YLPM1P49750 1951 aaKnown RBP9.46□□□□□ -0.9
PTCH1-203ENST00000375274 IGKV1-39P01597 117 aa9.46□□□□□ -0.9
PTCH1-203ENST00000375274 IGKV1D-39P04432 117 aa9.46□□□□□ -0.9
PTCH1-203ENST00000375274 CD59P13987 128 aa9.46□□□□□ -0.9
PTCH1-203ENST00000375274 ZNF726P1Q15940 193 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms