RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SCNM1Q9BWG6 230 aa10.47□□□□□ -0.73
PRPF4-201ENST00000374198 LINC00470Q9BZP3 86 aa10.47□□□□□ -0.73
PRPF4-201ENST00000374198 F8W1H4 67 aa10.47□□□□□ -0.73
PRPF4-201ENST00000374198 APOHP02749 345 aaPredicted RBP10.47□□□□□ -0.73
PRPF4-201ENST00000374198 SSR4P51571 173 aa10.47□□□□□ -0.73
PRPF4-201ENST00000374198 PLP2Q04941 152 aa10.47□□□□□ -0.73
PRPF4-201ENST00000374198 WFDC2Q14508 124 aa10.47□□□□□ -0.73
PRPF4-201ENST00000374198 PCOLCEQ15113 449 aa10.47□□□□□ -0.73
PRPF4-201ENST00000374198 RBPMS2Q6ZRY4 209 aaKnown RBP10.47□□□□□ -0.73
PRPF4-201ENST00000374198 SPAG8Q99932 426 aaPredicted RBP10.47□□□□□ -0.73
PRPF4-201ENST00000374198 LINC00322Q6ZN03 302 aaPredicted RBP10.46□□□□□ -0.73
PRPF4-201ENST00000374198 PPP1R32Q7Z5V6 425 aa10.46□□□□□ -0.73
PRPF4-201ENST00000374198 OR13A1Q8NGR1 328 aa10.46□□□□□ -0.73
PRPF4-201ENST00000374198 HCFC1P51610 2035 aa10.46□□□□□ -0.73
PRPF4-201ENST00000374198 MT-CO3P00414 261 aa10.46□□□□□ -0.74
PRPF4-201ENST00000374198 PYYP10082 97 aa10.46□□□□□ -0.74
PRPF4-201ENST00000374198 TCTAP57738 103 aa10.46□□□□□ -0.74
PRPF4-201ENST00000374198 MTURNQ8N3F0 131 aa10.46□□□□□ -0.74
PRPF4-201ENST00000374198 GCSAMQ8N6F7 178 aa10.46□□□□□ -0.74
PRPF4-201ENST00000374198 S1PR3Q99500 378 aa10.46□□□□□ -0.74
PRPF4-201ENST00000374198 TMEM14BQ9NUH8 114 aa10.46□□□□□ -0.74
PRPF4-201ENST00000374198 BOKQ9UMX3 212 aaPredicted RBP10.46□□□□□ -0.74
PRPF4-201ENST00000374198 FOXA2Q9Y261 457 aaPredicted RBP10.46□□□□□ -0.74
PRPF4-201ENST00000374198 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.45□□□□□ -0.74
PRPF4-201ENST00000374198 P01737 135 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 GNG5P63218 68 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 LTC4SQ16873 150 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 HINT2Q9BX68 163 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 GFRA4Q9GZZ7 299 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 PTPRBP23467 1997 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 SERTM2A0A1B0GWG4 89 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 CYC1P08574 325 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 ACP1P24666 158 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 C5orf64Q2M2E5 130 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 LGALS9BQ3B8N2 356 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 ZNF766Q5HY98 468 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 LGALS9CQ6DKI2 356 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 OR8A1Q8NGG7 326 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 OR9G1Q8NH87 305 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 SGK494Q96LW2 274 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 C18orf15Q96N68 181 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 PAXXQ9BUH6 204 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 MLST8Q9BVC4 326 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 SIGLEC8Q9NYZ4 499 aa10.45□□□□□ -0.74
PRPF4-201ENST00000374198 SDK2Q58EX2 2172 aa10.44□□□□□ -0.74
PRPF4-201ENST00000374198 ADAMTS20P59510 1910 aa10.44□□□□□ -0.74
PRPF4-201ENST00000374198 SRRM4A7MD48 611 aaKnown RBP10.44□□□□□ -0.74
PRPF4-201ENST00000374198 SPINT2O43291 252 aa10.44□□□□□ -0.74
PRPF4-201ENST00000374198 GRPP07492 148 aa10.44□□□□□ -0.74
PRPF4-201ENST00000374198 TM4SF20Q53R12 229 aa10.44□□□□□ -0.74
PRPF4-201ENST00000374198 RPL39P5Q59GN2 51 aa10.44□□□□□ -0.74
PRPF4-201ENST00000374198 PCP2Q8IVA1 136 aa10.44□□□□□ -0.74
PRPF4-201ENST00000374198 GPR82Q96P67 336 aa10.44□□□□□ -0.74
PRPF4-201ENST00000374198 AKIRIN1Q9H9L7 192 aaPredicted RBP10.44□□□□□ -0.74
PRPF4-201ENST00000374198 CACNA1DQ01668 2161 aa10.44□□□□□ -0.74
PRPF4-201ENST00000374198 C19orf71A6NCJ1 209 aa10.44□□□□□ -0.74
PRPF4-201ENST00000374198 TMEM177Q53S58 311 aa10.44□□□□□ -0.74
PRPF4-201ENST00000374198 GUSBP11Q6P575 273 aa10.44□□□□□ -0.74
PRPF4-201ENST00000374198 MRPL16Q9NX20 251 aaKnown RBP10.44□□□□□ -0.74
PRPF4-201ENST00000374198 HAX1O00165 279 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 WNT9BO14905 357 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 NKX2-8O15522 239 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 TFF1P04155 84 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 RFPL3SP0C7P2 107 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 MYOD1P15172 320 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 EPDR1Q9UM22 224 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 KLF12Q9Y4X4 402 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 F11RQ9Y624 299 aaKnown RBP10.43□□□□□ -0.74
PRPF4-201ENST00000374198 LY6G6EA0A0G2JKS1 128 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 A0A1W2PRD5 423 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 A0A1W2PRF3 423 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 A0A1W2PRM7 423 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 C15orf65H3BRN8 121 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 CELA3AP09093 270 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 FXYD2P54710 66 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 CR1LQ2VPA4 569 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 HES3Q5TGS1 186 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 SH2D6Q7Z4S9 175 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 PRSS3P2Q8NHM4 247 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 ZNF492Q9P255 531 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 U3KQA8 63 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 TSPAN13O95857 204 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 MOSP00540 346 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 GCSHP23434 173 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 MYCNOSP40205 109 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 NMUP48645 174 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 ATP5G2Q06055 141 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 MLANAQ16655 118 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 BCL6BQ8N143 479 aaPredicted RBP10.43□□□□□ -0.74
PRPF4-201ENST00000374198 RPRMLQ8N4K4 120 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 DCTN5Q9BTE1 182 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 MSRB2Q9Y3D2 182 aa10.43□□□□□ -0.74
PRPF4-201ENST00000374198 IGKV3D-15A0A087WSY6 115 aa10.42□□□□□ -0.74
PRPF4-201ENST00000374198 A0A096LNJ9 63 aa10.42□□□□□ -0.74
PRPF4-201ENST00000374198 KBTBD11-OT1A0A1B0GTJ5 212 aa10.42□□□□□ -0.74
PRPF4-201ENST00000374198 KIR2DS2P43631 304 aa10.42□□□□□ -0.74
PRPF4-201ENST00000374198 HOXA4Q00056 320 aaPredicted RBP10.42□□□□□ -0.74
PRPF4-201ENST00000374198 ETDBQ3ZM63 59 aa10.42□□□□□ -0.74
PRPF4-201ENST00000374198 PHLDA1Q8WV24 401 aaPredicted RBP10.42□□□□□ -0.74
PRPF4-201ENST00000374198 GNG12Q9UBI6 72 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms