RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 RNF114Q9Y508 228 aa11.2□□□□□ -0.62
RCC1-201ENST00000373831 CLPSL1A2RUU4 121 aa11.2□□□□□ -0.62
RCC1-201ENST00000373831 TGOLN2O43493 480 aa11.2□□□□□ -0.62
RCC1-201ENST00000373831 YPEL3P61236 119 aaPredicted RBP11.2□□□□□ -0.62
RCC1-201ENST00000373831 SELENOTP62341 195 aa11.2□□□□□ -0.62
RCC1-201ENST00000373831 ZNF616Q08AN1 781 aa11.2□□□□□ -0.62
RCC1-201ENST00000373831 C12orf54Q6X4T0 127 aa11.2□□□□□ -0.62
RCC1-201ENST00000373831 C18orf65Q6ZTR6 163 aa11.2□□□□□ -0.62
RCC1-201ENST00000373831 TENM1Q9UKZ4 2725 aa11.19□□□□□ -0.62
RCC1-201ENST00000373831 ANKRD34BA5PLL1 514 aa11.19□□□□□ -0.62
RCC1-201ENST00000373831 TOMM40O96008 361 aa11.19□□□□□ -0.62
RCC1-201ENST00000373831 ZNF726P1Q15940 193 aa11.19□□□□□ -0.62
RCC1-201ENST00000373831 TMEM41BQ5BJD5 291 aa11.19□□□□□ -0.62
RCC1-201ENST00000373831 AKR1C8PQ5T2L2 129 aa11.19□□□□□ -0.62
RCC1-201ENST00000373831 SSX7Q7RTT5 188 aa11.19□□□□□ -0.62
RCC1-201ENST00000373831 RPP25LQ8N5L8 163 aaKnown RBP11.19□□□□□ -0.62
RCC1-201ENST00000373831 UBE2E2Q96LR5 201 aa11.19□□□□□ -0.62
RCC1-201ENST00000373831 KCNIP2Q9NS61 270 aa11.19□□□□□ -0.62
RCC1-201ENST00000373831 IGHV3-35A0A0C4DH35 117 aa11.18□□□□□ -0.62
RCC1-201ENST00000373831 UMAD1C9J7I0 102 aa11.18□□□□□ -0.62
RCC1-201ENST00000373831 BMPR1BO00238 502 aa11.18□□□□□ -0.62
RCC1-201ENST00000373831 NUPL2O15504 423 aaKnown RBP11.18□□□□□ -0.62
RCC1-201ENST00000373831 EIF3GO75821 320 aaKnown RBP eCLIP11.18□□□□□ -0.62
RCC1-201ENST00000373831 NMBP08949 121 aa11.18□□□□□ -0.62
RCC1-201ENST00000373831 RD3LP0DJH9 198 aa11.18□□□□□ -0.62
RCC1-201ENST00000373831 CD28P10747 220 aa11.18□□□□□ -0.62
RCC1-201ENST00000373831 ARL3P36405 182 aa11.18□□□□□ -0.62
RCC1-201ENST00000373831 KRTAP10-3P60369 221 aa11.18□□□□□ -0.62
RCC1-201ENST00000373831 PATE2Q6UY27 113 aa11.18□□□□□ -0.62
RCC1-201ENST00000373831 RNF141Q8WVD5 230 aa11.18□□□□□ -0.62
RCC1-201ENST00000373831 TMEM37Q8WXS4 190 aa11.18□□□□□ -0.62
RCC1-201ENST00000373831 GAR1Q9NY12 217 aaKnown RBP11.18□□□□□ -0.62
RCC1-201ENST00000373831 WI2-2373I1.2A0A1W2PRP0 233 aa11.17□□□□□ -0.62
RCC1-201ENST00000373831 LGALS1P09382 135 aaKnown RBP11.17□□□□□ -0.62
RCC1-201ENST00000373831 M6PRP20645 277 aa11.17□□□□□ -0.62
RCC1-201ENST00000373831 SPSB3Q6PJ21 355 aa11.17□□□□□ -0.62
RCC1-201ENST00000373831 C11orf44Q8N8P7 122 aa11.17□□□□□ -0.62
RCC1-201ENST00000373831 OR10G4Q8NGN3 311 aa11.17□□□□□ -0.62
RCC1-201ENST00000373831 OR10G9Q8NGN4 311 aa11.17□□□□□ -0.62
RCC1-201ENST00000373831 OR10G7Q8NGN6 311 aa11.17□□□□□ -0.62
RCC1-201ENST00000373831 FAM213BQ8TBF2 198 aa11.17□□□□□ -0.62
RCC1-201ENST00000373831 DOK5Q9P104 306 aa11.17□□□□□ -0.62
RCC1-201ENST00000373831 ZNF705EA8MWA4 302 aaPredicted RBP11.16□□□□□ -0.62
RCC1-201ENST00000373831 I3L521 148 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 OR2C1O95371 312 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 MBP02144 154 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 CDX1P47902 265 aaPredicted RBP11.16□□□□□ -0.62
RCC1-201ENST00000373831 RAB5CP51148 216 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 PLP1P60201 277 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 ACOT6Q3I5F7 207 aaPredicted RBP11.16□□□□□ -0.62
RCC1-201ENST00000373831 SPATA31B1PQ5VZV4 182 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 OR51G1Q8NGK1 321 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 RCC1LQ96I51 464 aaKnown RBP11.16□□□□□ -0.62
RCC1-201ENST00000373831 ZFAND3Q9H8U3 227 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 PEF1Q9UBV8 284 aaKnown RBP11.16□□□□□ -0.62
RCC1-201ENST00000373831 PUS1Q9Y606 427 aaKnown RBP eCLIP11.16□□□□□ -0.62
RCC1-201ENST00000373831 IL4P05112 153 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 FABP1P07148 127 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 ORM2P19652 201 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 USF2Q15853 346 aaPredicted RBP11.16□□□□□ -0.62
RCC1-201ENST00000373831 MORN5Q5VZ52 161 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 FAM122CQ6P4D5 195 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 ZNF600Q6ZNG1 722 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 Q6ZRG5 221 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 Q8WTZ3 238 aa11.16□□□□□ -0.62
RCC1-201ENST00000373831 SEPSECSQ9HD40 501 aaKnown RBP11.16□□□□□ -0.62
RCC1-201ENST00000373831 IGHV3OR16-8A0A075B7F1 116 aa11.15□□□□□ -0.62
RCC1-201ENST00000373831 SEC14L6B5MCN3 397 aa11.15□□□□□ -0.62
RCC1-201ENST00000373831 OR5G3P0C626 314 aa11.15□□□□□ -0.62
RCC1-201ENST00000373831 LYZP61626 148 aa11.15□□□□□ -0.62
RCC1-201ENST00000373831 CLLU1Q5K131 121 aa11.15□□□□□ -0.62
RCC1-201ENST00000373831 TOMM20LQ6UXN7 152 aa11.15□□□□□ -0.62
RCC1-201ENST00000373831 DPPA3Q6W0C5 159 aa11.15□□□□□ -0.62
RCC1-201ENST00000373831 OR1B1Q8NGR6 318 aa11.15□□□□□ -0.62
RCC1-201ENST00000373831 RNF125Q96EQ8 232 aa11.15□□□□□ -0.62
RCC1-201ENST00000373831 UHRF2Q96PU4 802 aa11.15□□□□□ -0.62
RCC1-201ENST00000373831 CITED2Q99967 270 aaPredicted RBP11.15□□□□□ -0.62
RCC1-201ENST00000373831 SLC25A22Q9H936 323 aa11.15□□□□□ -0.62
RCC1-201ENST00000373831 MRPL27Q9P0M9 148 aaKnown RBP11.15□□□□□ -0.62
RCC1-201ENST00000373831 COX7A2P2O60397 106 aa11.14□□□□□ -0.63
RCC1-201ENST00000373831 SCGB2A1O75556 95 aa11.14□□□□□ -0.63
RCC1-201ENST00000373831 DEFB136Q30KP8 78 aa11.14□□□□□ -0.63
RCC1-201ENST00000373831 KHDC1LQ5JSQ8 128 aa11.14□□□□□ -0.63
RCC1-201ENST00000373831 FAM209BQ5JX69 171 aa11.14□□□□□ -0.63
RCC1-201ENST00000373831 PXDC1Q5TGL8 231 aa11.14□□□□□ -0.63
RCC1-201ENST00000373831 UNQ9165/PRO28630Q6UXU0 137 aa11.14□□□□□ -0.63
RCC1-201ENST00000373831 C4orf3Q8WVX3 66 aa11.14□□□□□ -0.63
RCC1-201ENST00000373831 SAT2Q96F10 170 aaPredicted RBP11.14□□□□□ -0.63
RCC1-201ENST00000373831 PBDC1Q9BVG4 233 aa11.14□□□□□ -0.63
RCC1-201ENST00000373831 DNAJC4Q9NNZ3 241 aa11.14□□□□□ -0.63
RCC1-201ENST00000373831 IGHV4OR15-8A0A075B7B6 117 aa11.13□□□□□ -0.63
RCC1-201ENST00000373831 A0A087WW49 117 aa11.13□□□□□ -0.63
RCC1-201ENST00000373831 A0A1B0GUS0 222 aa11.13□□□□□ -0.63
RCC1-201ENST00000373831 HMGB3O15347 200 aaKnown RBP11.13□□□□□ -0.63
RCC1-201ENST00000373831 GGCTO75223 188 aaKnown RBP11.13□□□□□ -0.63
RCC1-201ENST00000373831 HYPMO75409 117 aa11.13□□□□□ -0.63
RCC1-201ENST00000373831 RELQ04864 619 aaPredicted RBP11.13□□□□□ -0.63
RCC1-201ENST00000373831 FAM78BQ5VT40 261 aa11.13□□□□□ -0.63
RCC1-201ENST00000373831 C10orf113Q5VZT2 155 aa11.13□□□□□ -0.63
RCC1-201ENST00000373831 MIR17HGQ75NE6 70 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms