RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 TMEM14DPA8MWL7 114 aa7.73□□□□□ -1.17
PTPRT-205ENST00000373193 IGHV3-53P01767 116 aa7.73□□□□□ -1.17
PTPRT-205ENST00000373193 LINC01560Q8TB33 94 aa7.73□□□□□ -1.17
PTPRT-205ENST00000373193 ADAMTSL1Q8N6G6 1762 aa7.73□□□□□ -1.17
PTPRT-205ENST00000373193 TMEM8BA6NDV4 472 aa7.73□□□□□ -1.17
PTPRT-205ENST00000373193 PATE3B3GLJ2 98 aa7.73□□□□□ -1.17
PTPRT-205ENST00000373193 KIAA1549Q9HCM3 1950 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 COLCA2A8K830 154 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 NPSP0C0P6 89 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 FAM216BQ8N7L0 139 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 CD200R1LQ6Q8B3 271 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 UNQ9370/PRO34162Q6UXP9 181 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 CD5LO43866 347 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 RNF126Q9BV68 326 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 FREM1Q5H8C1 2179 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 C21orf140B9A014 251 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 CD5P06127 495 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 TEX38Q6PEX7 206 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 FAM181AQ8N9Y4 354 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 A0A1B0GUS0 222 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 SHISA3A0PJX4 238 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 CDCP2Q5VXM1 449 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 SPATA31B1PQ5VZV4 182 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 BHLHA9Q7RTU4 235 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 SAA2-SAA4A0A096LPE2 208 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 GAGE12JA6NER3 117 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 SAA2P0DJI9 122 aaPredicted RBP7.72□□□□□ -1.17
PTPRT-205ENST00000373193 GAGE4Q13068 117 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 GAGE5Q13069 117 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 GAGE6Q13070 117 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 ZNF664Q8N3J9 261 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 OSTCQ9NRP0 149 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 IGHV1-45A0A0A0MS14 117 aa7.72□□□□□ -1.17
PTPRT-205ENST00000373193 USP54Q70EL1 1684 aa7.71□□□□□ -1.17
PTPRT-205ENST00000373193 PRR33A8MZF0 331 aa7.71□□□□□ -1.17
PTPRT-205ENST00000373193 ATP1A1-AS1Q5TC04 95 aa7.71□□□□□ -1.17
PTPRT-205ENST00000373193 PLEKHB2Q96CS7 222 aa7.71□□□□□ -1.17
PTPRT-205ENST00000373193 hADV29S1A0JD25 119 aa7.71□□□□□ -1.17
PTPRT-205ENST00000373193 C1orf159Q96HA4 380 aa7.71□□□□□ -1.17
PTPRT-205ENST00000373193 HELZP42694 1942 aaKnown RBP7.71□□□□□ -1.17
PTPRT-205ENST00000373193 MED12LQ86YW9 2145 aa7.71□□□□□ -1.17
PTPRT-205ENST00000373193 WNT2P09544 360 aa7.71□□□□□ -1.17
PTPRT-205ENST00000373193 ATP6V0BQ99437 205 aa7.71□□□□□ -1.17
PTPRT-205ENST00000373193 RFNGQ9Y644 331 aa7.71□□□□□ -1.17
PTPRT-205ENST00000373193 TCTEX1D4Q5JR98 221 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 PLPPR1Q8TBJ4 325 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 TRPM7Q96QT4 1865 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 SYS1-DBNDD2H3BUS1 97 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 C3orf79P0CE67 100 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 UBE2DNLQ8IWF7 75 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 NHSQ6T4R5 1651 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 AZU1P20160 251 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 C1orf174Q8IYL3 243 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 PYY3Q5JQD4 70 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 FAM57AQ8TBR7 257 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 RNF125Q96EQ8 232 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 SPXQ9BT56 116 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 TIMM21Q9BVV7 248 aa7.71□□□□□ -1.18
PTPRT-205ENST00000373193 PLXND1Q9Y4D7 1925 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 TRBV20-1A0A075B6N2 111 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 K7ERJ3 54 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 C11orf44Q8N8P7 122 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 CSTL1Q9H114 145 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 NYNRINQ9P2P1 1898 aaKnown RBP7.7□□□□□ -1.18
PTPRT-205ENST00000373193 NRXN3Q9Y4C0 1643 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 SNHG12Q9BXW3 62 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 PPBPP02775 128 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 EFNB3Q15768 340 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 TEX43Q6ZNM6 134 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 TMEM158Q8WZ71 300 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.7□□□□□ -1.18
PTPRT-205ENST00000373193 A0A087WV48 116 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 TRAV25A0A0B4J276 109 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 PCOLCEQ15113 449 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 LYZL1Q6UWQ5 148 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 IGKV1D-13A0A0B4J2D9 117 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 IGKV1-13P0DP09 117 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 LAIR2Q6ISS4 152 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 OVOL2Q9BRP0 275 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 QSER1Q2KHR3 1735 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 CTSBP07858 339 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 PAPPAQ13219 1627 aa7.7□□□□□ -1.18
PTPRT-205ENST00000373193 NCKAP5O14513 1909 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 ERCC8Q13216 396 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 Q8TAT8 98 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 CELA3BP08861 270 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 HAMPP81172 84 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 A0A087WWL8 130 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 PMVKQ15126 192 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 ZNF831Q5JPB2 1677 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 COL22A1Q8NFW1 1626 aaPredicted RBP7.69□□□□□ -1.18
PTPRT-205ENST00000373193 ZNF876PQ49A33 203 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 COLCA1Q6ZS62 124 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 NUP35Q8NFH5 326 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 SBF2Q86WG5 1849 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 PLXNA1Q9UIW2 1896 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 NDUFS5O43920 106 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 C1orf162Q8NEQ5 155 aaPredicted RBP7.69□□□□□ -1.18
PTPRT-205ENST00000373193 RASL10AQ92737 203 aa7.69□□□□□ -1.18
PTPRT-205ENST00000373193 TMEM54Q969K7 222 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms