RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 PGLYRP4Q96LB8 373 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 CARD19Q96LW7 228 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 RASL11BQ9BPW5 248 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 SPANXA1Q9NS26 97 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 FZR1Q9UM11 496 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 NPIPB13A6NJU9 1138 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 NPIPB4C9JG80 1138 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 CRLF1O75462 422 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 CA6P23280 308 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 HES1Q14469 280 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 WFDC3Q8IUB2 231 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 LINC00479Q96M42 142 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 ZNF407Q9C0G0 2248 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 LINC01548A6NM66 108 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 C16orf97H3BN30 126 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 B4GALT1P15291 398 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 RRN3P1Q2M238 152 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 MKXQ8IYA7 352 aa8.7□□□□□ -1.02
TRERF1-203ENST00000372917 SMCPP49901 116 aaPredicted RBP8.69□□□□□ -1.02
TRERF1-203ENST00000372917 DLX4Q92988 240 aaPredicted RBP8.69□□□□□ -1.02
TRERF1-203ENST00000372917 LOC389332A0A1B0GUA5 103 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 CLPSP04118 112 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 THBDP07204 575 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 FAM106CPP0CH98 169 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 MYOD1P15172 320 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 FAM106AQ4KMX7 169 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 DTX1Q86Y01 620 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 ZNF414Q96IQ9 312 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 HIST1H4GQ99525 98 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 MRPS17Q9Y2R5 130 aaKnown RBP8.69□□□□□ -1.02
TRERF1-203ENST00000372917 IGKV1-12A0A0C4DH73 117 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 KIR2DS1A0A191URI9 304 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 C2CD4DB7Z1M9 353 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 MGST3O14880 152 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 IGKV1D-12P01611 117 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 CCL1P22362 96 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 KIR2DS1Q14954 304 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 CFAP126Q5VTH2 177 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 C10orf126Q8N4M7 172 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 CHCHD5Q9BSY4 110 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 WDR83OSQ9Y284 106 aa8.69□□□□□ -1.02
TRERF1-203ENST00000372917 IGKV1-27A0A075B6S5 117 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 GNG5P63218 68 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 DLL3Q9NYJ7 618 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 A0A096LPE4 126 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 A0A1W2PPZ6 126 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 J3KT08 172 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 MEOX1P50221 254 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 MZT1Q08AG7 82 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 HES3Q5TGS1 186 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 TEN1Q86WV5 123 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 MKI67P46013 3256 aaKnown RBP8.68□□□□□ -1.02
TRERF1-203ENST00000372917 ROS1P08922 2347 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 COL8A1P27658 744 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 POU2AF1Q16633 256 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 FAM234AQ9H0X4 552 aa8.68□□□□□ -1.02
TRERF1-203ENST00000372917 IGKV1-6A0A0C4DH72 117 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 IGKV3-11P04433 115 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 PLGLB1Q02325 96 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 OR1C1Q15619 314 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 C21orf62Q9NYP8 219 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 FAM90A18PA6NE21 464 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 FAM90A16PA6NEW6 464 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 FAM90A8PA6NJQ4 464 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 FAM90A9PA6NNJ1 464 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 PMS2P5A8MQ11 134 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 NPFFO15130 113 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 IL4P05112 153 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 RPL30P62888 115 aaKnown RBP8.67□□□□□ -1.02
TRERF1-203ENST00000372917 NCOR1O75376 2440 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 CACNA1GO43497 2377 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 IGLV2-8P01709 118 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 C9orf153Q5TBE3 101 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 MIR17HGQ75NE6 70 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 TMEM133Q9H2Q1 129 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 TCF19Q9Y242 345 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 SPTBN2O15020 2390 aa8.67□□□□□ -1.02
TRERF1-203ENST00000372917 AGRNO00468 2067 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 TNFSF11O14788 317 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 EFNB3Q15768 340 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 CIARTQ8N365 385 aaPredicted RBP8.66□□□□□ -1.02
TRERF1-203ENST00000372917 RPEQ96AT9 228 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 TRIOBPQ9H2D6 2365 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 TRBV25-1A0A075B6N4 114 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 A8MWV9 139 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 IGHV4-34P06331 123 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 ACP1P24666 158 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 OR10J6PQ8NGY7 276 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 RASL10AQ92737 203 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 OOSP1A8MZH6 123 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 SP1P08047 785 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 SPATA46Q5T0L3 261 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 DUX4L9Q6RFH8 374 aaPredicted RBP8.66□□□□□ -1.02
TRERF1-203ENST00000372917 PCSK4Q6UW60 755 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 OR1L4Q8NGR5 311 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 UCN2Q96RP3 112 aa8.66□□□□□ -1.02
TRERF1-203ENST00000372917 C5orf42Q9H799 3197 aa8.65□□□□□ -1.02
TRERF1-203ENST00000372917 LMO7DNF2Z398 122 aa8.65□□□□□ -1.02
TRERF1-203ENST00000372917 CXCL13O43927 109 aa8.65□□□□□ -1.02
TRERF1-203ENST00000372917 LINC00271P0C7V0 271 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms