RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 TEX48A0A1B0GUV7 120 aa11.96□□□□□ -0.49
UBR2-201ENST00000372899 MBNL3Q9NUK0 354 aaKnown RBP11.96□□□□□ -0.49
UBR2-201ENST00000372899 NHP2Q9NX24 153 aaKnown RBP11.96□□□□□ -0.49
UBR2-201ENST00000372899 FAM223BA6NKX1 122 aa11.96□□□□□ -0.5
UBR2-201ENST00000372899 SRRM4A7MD48 611 aaKnown RBP11.96□□□□□ -0.5
UBR2-201ENST00000372899 FAM223AQ8IWN6 122 aa11.96□□□□□ -0.5
UBR2-201ENST00000372899 GTF3AQ92664 365 aaKnown RBP11.96□□□□□ -0.5
UBR2-201ENST00000372899 ANAPC13Q9BS18 74 aa11.96□□□□□ -0.5
UBR2-201ENST00000372899 CEP250Q9BV73 2442 aa11.96□□□□□ -0.5
UBR2-201ENST00000372899 A0A1B0GV90 55 aa11.96□□□□□ -0.5
UBR2-201ENST00000372899 ZNF474Q6S9Z5 364 aaPredicted RBP11.96□□□□□ -0.5
UBR2-201ENST00000372899 LIMS1P48059 325 aa11.95□□□□□ -0.5
UBR2-201ENST00000372899 PLEKHB2Q96CS7 222 aa11.95□□□□□ -0.5
UBR2-201ENST00000372899 ZNF625Q96I27 306 aaPredicted RBP11.95□□□□□ -0.5
UBR2-201ENST00000372899 BRD3OSQ6XYD6 125 aa11.95□□□□□ -0.5
UBR2-201ENST00000372899 MGST2Q99735 147 aa11.95□□□□□ -0.5
UBR2-201ENST00000372899 PSG8Q9UQ74 426 aa11.95□□□□□ -0.5
UBR2-201ENST00000372899 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.95□□□□□ -0.5
UBR2-201ENST00000372899 GATA2P23769 480 aaPredicted RBP11.95□□□□□ -0.5
UBR2-201ENST00000372899 ZCCHC24Q8N2G6 241 aaKnown RBP11.95□□□□□ -0.5
UBR2-201ENST00000372899 AMELYQ99218 206 aa11.95□□□□□ -0.5
UBR2-201ENST00000372899 MRPS18AQ9NVS2 196 aaKnown RBP11.95□□□□□ -0.5
UBR2-201ENST00000372899 WNK2Q9Y3S1 2297 aa11.95□□□□□ -0.5
UBR2-201ENST00000372899 TMEM256Q8N2U0 113 aa11.95□□□□□ -0.5
UBR2-201ENST00000372899 C1QTNF5Q9BXJ0 243 aa11.95□□□□□ -0.5
UBR2-201ENST00000372899 A8MWV9 139 aa11.95□□□□□ -0.5
UBR2-201ENST00000372899 C1orf100Q5SVJ3 147 aa11.95□□□□□ -0.5
UBR2-201ENST00000372899 CD160O95971 181 aa11.94□□□□□ -0.5
UBR2-201ENST00000372899 KLRD1Q13241 179 aa11.94□□□□□ -0.5
UBR2-201ENST00000372899 C5orf30Q96GV9 206 aa11.94□□□□□ -0.5
UBR2-201ENST00000372899 DOCK4Q8N1I0 1966 aa11.94□□□□□ -0.5
UBR2-201ENST00000372899 RNF223E7ERA6 249 aa11.94□□□□□ -0.5
UBR2-201ENST00000372899 RPL15P61313 204 aaKnown RBP11.94□□□□□ -0.5
UBR2-201ENST00000372899 EPDR1Q9UM22 224 aa11.94□□□□□ -0.5
UBR2-201ENST00000372899 IGHV2-26A0A0B4J1V2 119 aa11.94□□□□□ -0.5
UBR2-201ENST00000372899 CXCL2P19875 107 aa11.94□□□□□ -0.5
UBR2-201ENST00000372899 MORN2Q502X0 79 aa11.94□□□□□ -0.5
UBR2-201ENST00000372899 NPIPB13A6NJU9 1138 aa11.94□□□□□ -0.5
UBR2-201ENST00000372899 CD300EQ496F6 205 aaPredicted RBP11.94□□□□□ -0.5
UBR2-201ENST00000372899 ST6GALNAC3Q8NDV1 305 aa11.94□□□□□ -0.5
UBR2-201ENST00000372899 IGKV2-40A0A087WW87 121 aaPredicted RBP11.94□□□□□ -0.5
UBR2-201ENST00000372899 IGKV2D-40P01614 121 aaPredicted RBP11.94□□□□□ -0.5
UBR2-201ENST00000372899 ESDP10768 282 aa11.93□□□□□ -0.5
UBR2-201ENST00000372899 ATP5L2Q7Z4Y8 100 aa11.93□□□□□ -0.5
UBR2-201ENST00000372899 NPIPB5A8MRT5 1133 aa11.93□□□□□ -0.5
UBR2-201ENST00000372899 UBE2BP63146 152 aa11.93□□□□□ -0.5
UBR2-201ENST00000372899 FAM19A2Q8N3H0 131 aa11.93□□□□□ -0.5
UBR2-201ENST00000372899 LSM4Q9Y4Z0 139 aaKnown RBP11.93□□□□□ -0.5
UBR2-201ENST00000372899 CLDN16Q9Y5I7 305 aa11.93□□□□□ -0.5
UBR2-201ENST00000372899 TRAV13-1A0A0B4J241 112 aa11.93□□□□□ -0.5
UBR2-201ENST00000372899 J3QKU1 62 aa11.93□□□□□ -0.5
UBR2-201ENST00000372899 CFHR3Q02985 330 aa11.93□□□□□ -0.5
UBR2-201ENST00000372899 PUSL1Q8N0Z8 303 aaKnown RBP11.93□□□□□ -0.5
UBR2-201ENST00000372899 TRAV9-1A0A075B6T8 112 aa11.93□□□□□ -0.5
UBR2-201ENST00000372899 LINC00477Q96M19 166 aa11.93□□□□□ -0.5
UBR2-201ENST00000372899 ALPK2Q86TB3 2170 aa11.92□□□□□ -0.5
UBR2-201ENST00000372899 RNASE7Q9H1E1 156 aaKnown RBP11.92□□□□□ -0.5
UBR2-201ENST00000372899 FAM186AA6NE01 2351 aa11.92□□□□□ -0.5
UBR2-201ENST00000372899 IGHV1-18A0A0C4DH31 117 aa11.92□□□□□ -0.5
UBR2-201ENST00000372899 IFI6P09912 130 aa11.92□□□□□ -0.5
UBR2-201ENST00000372899 APCDD1LQ8NCL9 501 aa11.92□□□□□ -0.5
UBR2-201ENST00000372899 PLAC1Q9HBJ0 212 aa11.92□□□□□ -0.5
UBR2-201ENST00000372899 SPRR3Q9UBC9 169 aa11.92□□□□□ -0.5
UBR2-201ENST00000372899 TRAV25A0A0B4J276 109 aa11.92□□□□□ -0.5
UBR2-201ENST00000372899 DDTP30046 118 aa11.92□□□□□ -0.5
UBR2-201ENST00000372899 NDPQ00604 133 aa11.92□□□□□ -0.5
UBR2-201ENST00000372899 IL18BPO95998 194 aa11.92□□□□□ -0.5
UBR2-201ENST00000372899 IMMP2LQ96T52 175 aa11.92□□□□□ -0.5
UBR2-201ENST00000372899 GATA3P23771 443 aa11.91□□□□□ -0.5
UBR2-201ENST00000372899 VCYO14598 125 aa11.91□□□□□ -0.5
UBR2-201ENST00000372899 RAMP1O60894 148 aa11.91□□□□□ -0.5
UBR2-201ENST00000372899 CACNA1GO43497 2377 aa11.91□□□□□ -0.5
UBR2-201ENST00000372899 TRBV5-7A0A0A0MS05 114 aa11.91□□□□□ -0.5
UBR2-201ENST00000372899 INAFM2P0DMQ5 153 aa11.91□□□□□ -0.5
UBR2-201ENST00000372899 RCC1LQ96I51 464 aaKnown RBP11.91□□□□□ -0.5
UBR2-201ENST00000372899 FNDC4Q9H6D8 234 aaPredicted RBP11.91□□□□□ -0.5
UBR2-201ENST00000372899 SDK2Q58EX2 2172 aa11.91□□□□□ -0.5
UBR2-201ENST00000372899 TPTE2P1Q5T6R2 138 aa11.91□□□□□ -0.5
UBR2-201ENST00000372899 DEFB104AQ8WTQ1 72 aa11.91□□□□□ -0.5
UBR2-201ENST00000372899 M0R1W7 72 aa11.91□□□□□ -0.5
UBR2-201ENST00000372899 MYMXA0A1B0GTQ4 84 aa11.91□□□□□ -0.5
UBR2-201ENST00000372899 MMP23AO75900 390 aa11.9□□□□□ -0.5
UBR2-201ENST00000372899 TAL2Q16559 108 aa11.9□□□□□ -0.5
UBR2-201ENST00000372899 C4orf48Q5BLP8 95 aa11.9□□□□□ -0.5
UBR2-201ENST00000372899 PTPRFP10586 1907 aa11.9□□□□□ -0.5
UBR2-201ENST00000372899 ATP5G3P48201 142 aa11.9□□□□□ -0.5
UBR2-201ENST00000372899 TRBV25-1A0A075B6N4 114 aa11.9□□□□□ -0.5
UBR2-201ENST00000372899 AMBPP02760 352 aa11.9□□□□□ -0.5
UBR2-201ENST00000372899 LINC01619G3V211 115 aa11.9□□□□□ -0.5
UBR2-201ENST00000372899 HLA-DQB1P01920 261 aa11.9□□□□□ -0.5
UBR2-201ENST00000372899 PTPRDP23468 1912 aa11.9□□□□□ -0.5
UBR2-201ENST00000372899 ZNF329Q86UD4 541 aa11.9□□□□□ -0.5
UBR2-201ENST00000372899 PQLC2LA1A4F0 135 aa11.9□□□□□ -0.5
UBR2-201ENST00000372899 SSBP2P81877 361 aaPredicted RBP11.9□□□□□ -0.5
UBR2-201ENST00000372899 COL6A6A6NMZ7 2263 aa11.9□□□□□ -0.5
UBR2-201ENST00000372899 ZNF497Q6ZNH5 498 aa11.9□□□□□ -0.51
UBR2-201ENST00000372899 H3BUT2 72 aa11.89□□□□□ -0.51
UBR2-201ENST00000372899 VWC2Q2TAL6 325 aa11.89□□□□□ -0.51
UBR2-201ENST00000372899 CTSBP07858 339 aa11.89□□□□□ -0.51
UBR2-201ENST00000372899 MDS2Q8NDY4 140 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms