RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ITGB1BP1O14713 200 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 ZNHIT1O43257 154 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 EFEMP2O95967 443 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 ACTL10Q5JWF8 245 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 DMRTC2Q8IXT2 367 aaPredicted RBP11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 TRBV24-1A0A075B6N3 115 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 CD28P10747 220 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 CD300EQ496F6 205 aaPredicted RBP11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 IFI27L2Q9H2X8 130 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 TCRBV4S1A1TA0A5B7 111 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 C15orf61A6NNL5 157 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 C9orf50Q5SZB4 431 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 SLC25A47Q6Q0C1 308 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 IGHV3OR16-13A0A075B7E8 117 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 IGLV1-36A0A0B4J1U3 117 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 IGHV3-74A0A0B4J1X5 117 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 A0A1W2PPV9 198 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 IGKV1D-33P01593 117 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 IGKV1-33P01594 117 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 EGR4Q05215 589 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 LAGE3Q14657 143 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 ZNF525Q8N782 197 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 ADAMTSL3P82987 1691 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 A0A0U1RRA0 63 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 RPL39P5Q59GN2 51 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 OCC1Q8TAD7 63 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 PLEKHB2Q96CS7 222 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 CHCHD5Q9BSY4 110 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 PLA2G2FQ9BZM2 168 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 RLFQ13129 1914 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 IGHV3-23P01764 117 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 SPAARA0A1B0GVQ0 90 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 FAM90A2PQ658T7 463 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 ZNF501Q96CX3 271 aaPredicted RBP11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 FOXA2Q9Y261 457 aaPredicted RBP11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 NBR2O15453 112 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 GFRA3O60609 400 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 DUTP33316 252 aaKnown RBP11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 C8orf46Q8TAG6 207 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 A0A0J9YW62 118 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 TRACP01848 142 aa11.08□□□□□ -0.64
SRGAP3-201ENST00000360413 IGHV3-49A0A0A0MS15 119 aa11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 C7orf69Q9H7B7 122 aa11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 ITGBL1O95965 494 aaPredicted RBP11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 LY75O60449 1722 aa11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 A8MWP6 167 aa11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 LINC00158P58513 81 aa11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 WFDC6Q9BQY6 131 aa11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 R3HDMLQ9H3Y0 253 aa11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 FGF16O43320 207 aa11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 LAIR2Q6ISS4 152 aa11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 PILRBQ9UKJ0 227 aa11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 CD5LO43866 347 aa11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 LCN12Q6JVE5 192 aa11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 TEX38Q6PEX7 206 aa11.07□□□□□ -0.64
SRGAP3-201ENST00000360413 TRAV8-3A0A0A6YYJ7 113 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 TIMP3P35625 211 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 ANAPC10Q9UM13 185 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 A0A1W2PQF6 199 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 C9JAW5 83 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 ZNF415Q09FC8 603 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 RASL11AQ6T310 242 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 ACP7Q6ZNF0 438 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 UCP1P25874 307 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 RNF114Q9Y508 228 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 ZNF883P0CG24 379 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 CFHR5Q9BXR6 569 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 LSM4Q9Y4Z0 139 aaKnown RBP11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 NYNRINQ9P2P1 1898 aaKnown RBP11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 BTCP35070 178 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 ZXDCQ2QGD7 858 aaPredicted RBP11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 TSKUQ8WUA8 353 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 C18orf12Q96KH6 178 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 SMAD7O15105 426 aaKnown RBP11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 TMEM256Q8N2U0 113 aa11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 TSSC4Q9Y5U2 329 aaPredicted RBP11.06□□□□□ -0.64
SRGAP3-201ENST00000360413 IQCF6A8MYZ5 107 aa11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 KLF17Q5JT82 389 aaPredicted RBP11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 TMEM52Q8NDY8 209 aa11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 GGTLC1Q9BX51 225 aa11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 GATA2P23769 480 aaPredicted RBP11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 RPL36AP83881 106 aaKnown RBP11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 SUMO4Q6EEV6 95 aa11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 RPL36ALQ969Q0 106 aaKnown RBP11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 MGAMO43451 1857 aa11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 CD33P20138 364 aa11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 A0A1B0GTI1 187 aa11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 BHLHA9Q7RTU4 235 aa11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 S4R3C0 116 aa11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 RMI2Q96E14 147 aa11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 NAV3Q8IVL0 2385 aa11.05□□□□□ -0.64
SRGAP3-201ENST00000360413 LOC101059948A0A1B0GTJ6 334 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 NPSP0C0P6 89 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 PCOLCEQ15113 449 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 PAX4O43316 350 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 OR9G9P0C7N8 305 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 VWA8A3KMH1 1905 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 PLXNB3Q9ULL4 1909 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 SHISA3A0PJX4 238 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 PROB1E7EW31 1015 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms