RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 ST6GALNAC6Q969X2 333 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 RARRES2Q99969 163 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 NABP2Q9BQ15 211 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 SSBP3Q9BWW4 388 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-202ENST00000359366 RAB9BQ9NP90 201 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 UQCR10Q9UDW1 63 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 LAMTOR2Q9Y2Q5 125 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 MRPS16Q9Y3D3 137 aaKnown RBP4.1□□□□□ -1.75
ATXN3-202ENST00000359366 ACANP16112 2415 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 TRBV24-1A0A075B6N3 115 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 IGHV3OR16-10A0A075B7F0 116 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 C15orf61A6NNL5 157 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 PMS2P5A8MQ11 134 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 GNB1P62873 340 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 VAMP3Q15836 100 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 ACOT6Q3I5F7 207 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-202ENST00000359366 GCSAMLQ5JQS6 135 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 LCN15Q6UWW0 184 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 NHLRC2Q8NBF2 726 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-202ENST00000359366 OR5B3Q8NH48 314 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 SCGB1C1Q8TD33 95 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 ABHD5Q8WTS1 349 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 LHX4Q969G2 390 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 TEX50A0A1B0GTY4 177 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 GAGE12BA1L429 117 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 FAM90A26D6RGX4 464 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 CA2P00918 260 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 IGKV1D-33P01593 117 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 IGKV1-33P01594 117 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 APOA2P02652 100 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 SEC11BP0C7V7 166 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 KIR2DS2P43631 304 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 VDAC2P45880 294 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-202ENST00000359366 HBG1P69891 147 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 HBG2P69892 147 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 ZNF726P1Q15940 193 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 HLA-DRB5Q30154 266 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 HIST2H2BCQ6DN03 193 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 ACSM6Q6P461 480 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 DYNAPQ8N1N2 210 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 KLHDC1Q8N7A1 406 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 TCTEX1D1Q8N7M0 179 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 OR5AN1Q8NGI8 311 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 NEU4Q8WWR8 484 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-202ENST00000359366 FRZBQ92765 325 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 FLYWCH2Q96CP2 140 aaKnown RBP4.09□□□□□ -1.75
ATXN3-202ENST00000359366 PERPQ96FX8 193 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 VAMP8Q9BV40 100 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 CLEC7AQ9BXN2 247 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 PATZ1Q9HBE1 687 aaKnown RBP4.09□□□□□ -1.75
ATXN3-202ENST00000359366 RPRMQ9NS64 109 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 TMEM14BQ9NUH8 114 aa4.09□□□□□ -1.75
ATXN3-202ENST00000359366 ITPR3Q14573 2671 aa4.09□□□□□ -1.76
ATXN3-202ENST00000359366 IGHV3-21A0A0B4J1V1 117 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 BUB1B-PAK6H3BSN5 160 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 UPK2O00526 184 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 PAX4O43316 350 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 HRASP01112 189 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 IGLV1-47P01700 117 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 IGLV2-23P01705 113 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 PF4P02776 101 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 TFPI2P48307 235 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 EFNA4P52798 201 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 TAS2R30P59541 319 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 LRRC75BQ2VPJ9 315 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 OR10P1Q8NGE3 313 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 CLDND2Q8NHS1 167 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 Q8WTZ3 238 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 SSMEM1Q8WWF3 244 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 TAF15Q92804 592 aaKnown RBP eCLIP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 ADTRPQ96IZ2 230 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 BTF3L4Q96K17 158 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 OR5B12Q96R08 314 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 CCL19Q99731 98 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 PSMG3Q9BT73 122 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 WDR61Q9GZS3 305 aaKnown RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 EIF5A2Q9GZV4 153 aaKnown RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 SLC25A22Q9H936 323 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 ZNF586Q9NXT0 402 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 INSIG2Q9Y5U4 225 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 SETD2Q9BYW2 2564 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 NF1P21359 2839 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 FLNAP21333 2647 aaKnown RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 IGHV1-3A0A0C4DH29 117 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 TMEM213A2RRL7 107 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 CGB1A6NKQ9 187 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 FCN1O00602 326 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 TIMM23O14925 209 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 GNG7O60262 68 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 KBTBD11O94819 623 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 RND2P52198 227 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 RIPPLY3P57055 190 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 HSPE1P61604 102 aaKnown RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 PNRC1Q12796 327 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-202ENST00000359366 SOHLH1Q5JUK2 328 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 RUSC1-AS1Q66K80 236 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 HCP5Q6MZN7 132 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 SPSB3Q6PJ21 355 aa4.08□□□□□ -1.76
ATXN3-202ENST00000359366 VMO1Q7Z5L0 202 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms