RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 VCX2Q9H322 139 aa9.31□□□□□ -0.92
FN1-204ENST00000356005 PRTN3P24158 256 aa9.31□□□□□ -0.92
FN1-204ENST00000356005 MST1P26927 711 aa9.31□□□□□ -0.92
FN1-204ENST00000356005 GAS1P54826 345 aa9.31□□□□□ -0.92
FN1-204ENST00000356005 SCGB3A1Q96QR1 104 aa9.31□□□□□ -0.92
FN1-204ENST00000356005 LINC00477Q96M19 166 aa9.31□□□□□ -0.92
FN1-204ENST00000356005 ADARB2-AS1A8MUL3 147 aa9.31□□□□□ -0.92
FN1-204ENST00000356005 EML5Q05BV3 1969 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 BEND2Q8NDZ0 799 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 PLPPR1Q8TBJ4 325 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 GLMPQ8WWB7 406 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 RPP21Q9H633 154 aaKnown RBP9.3□□□□□ -0.92
FN1-204ENST00000356005 IFT22Q9H7X7 185 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 H3BTX0 84 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 ZNF474Q6S9Z5 364 aaPredicted RBP9.3□□□□□ -0.92
FN1-204ENST00000356005 ISOC2Q96AB3 205 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 TOMM7Q9P0U1 55 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 CGAP01215 116 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 NHLRC3Q5JS37 347 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 TRAV9-1A0A075B6T8 112 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 LOC107984156A0A0G2JMH3 177 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 ARL17AQ8IVW1 177 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 BRD3OSQ6XYD6 125 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 PAM16Q9Y3D7 125 aa9.3□□□□□ -0.92
FN1-204ENST00000356005 SOD3P08294 240 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 TRAV9-2A0A087WT02 112 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 RAMP3O60896 148 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 CD8AP01732 235 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 RPL35AP18077 110 aaKnown RBP9.29□□□□□ -0.92
FN1-204ENST00000356005 CKS1BP61024 79 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 SRSF6Q13247 344 aaKnown RBP9.29□□□□□ -0.92
FN1-204ENST00000356005 TMEM86BQ8N661 226 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 ZNF414Q96IQ9 312 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 C7orf71A4D174 169 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 PPBPP02775 128 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 TBX6O95947 436 aaPredicted RBP9.29□□□□□ -0.92
FN1-204ENST00000356005 HOXA5P20719 270 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 TRGV9Q99603 122 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 JKAMPQ9P055 326 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 KLRD1Q13241 179 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 LYZL4Q96KX0 146 aa9.29□□□□□ -0.92
FN1-204ENST00000356005 NABP1Q96AH0 204 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 RCHY1Q96PM5 261 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 CHCHD5Q9BSY4 110 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 IGHV1-69DA0A0B4J2H0 117 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 IGHV1-69P01742 117 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 ZNF324BQ6AW86 544 aaPredicted RBP9.28□□□□□ -0.92
FN1-204ENST00000356005 ASCL4Q6XD76 172 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 TMEM183AQ8IXX5 376 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 SNRPEP62304 92 aaKnown RBP9.28□□□□□ -0.92
FN1-204ENST00000356005 TMEM136Q6ZRR5 245 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 DPRXA6NFQ7 191 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.28□□□□□ -0.92
FN1-204ENST00000356005 OR11H1Q8NG94 326 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 OR11H2Q8NH07 326 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 A0A1B0GUS0 222 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 EGR1P18146 543 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 REG4Q9BYZ8 158 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 RPL36AP83881 106 aaKnown RBP9.28□□□□□ -0.92
FN1-204ENST00000356005 EFNB3Q15768 340 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 C9orf139Q6ZV77 190 aa9.28□□□□□ -0.92
FN1-204ENST00000356005 RPL36ALQ969Q0 106 aaKnown RBP9.28□□□□□ -0.92
FN1-204ENST00000356005 DAZ1Q9NQZ3 744 aaKnown RBP9.28□□□□□ -0.92
FN1-204ENST00000356005 TRAV8-6A0A0B4J262 113 aa9.27□□□□□ -0.92
FN1-204ENST00000356005 IGHV2-70DA0A0C4DH43 119 aa9.27□□□□□ -0.92
FN1-204ENST00000356005 PRB3Q04118 309 aaPredicted RBP9.27□□□□□ -0.92
FN1-204ENST00000356005 NEUROG1Q92886 237 aa9.27□□□□□ -0.92
FN1-204ENST00000356005 PRDM13Q9H4Q3 707 aa9.27□□□□□ -0.92
FN1-204ENST00000356005 TMEM160Q9NX00 188 aa9.27□□□□□ -0.93
FN1-204ENST00000356005 APOMO95445 188 aa9.27□□□□□ -0.93
FN1-204ENST00000356005 CEACAM8P31997 349 aaPredicted RBP9.27□□□□□ -0.93
FN1-204ENST00000356005 CR1LQ2VPA4 569 aa9.27□□□□□ -0.93
FN1-204ENST00000356005 RCC1LQ96I51 464 aaKnown RBP9.27□□□□□ -0.93
FN1-204ENST00000356005 C1QL1O75973 258 aa9.27□□□□□ -0.93
FN1-204ENST00000356005 FABP2P12104 132 aa9.27□□□□□ -0.93
FN1-204ENST00000356005 SRIP30626 198 aa9.27□□□□□ -0.93
FN1-204ENST00000356005 ELF5Q9UKW6 265 aaPredicted RBP9.27□□□□□ -0.93
FN1-204ENST00000356005 LINC01619G3V211 115 aa9.27□□□□□ -0.93
FN1-204ENST00000356005 TCF15Q12870 199 aa9.27□□□□□ -0.93
FN1-204ENST00000356005 ORMDL2Q53FV1 153 aa9.27□□□□□ -0.93
FN1-204ENST00000356005 IGHV3OR16-8A0A075B7F1 116 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 MLNRO43193 412 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 COL8A2P25067 703 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 HSPB9Q9BQS6 159 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 TRAF4Q9BUZ4 470 aaPredicted RBP9.26□□□□□ -0.93
FN1-204ENST00000356005 NXT2Q9NPJ8 142 aaKnown RBP9.26□□□□□ -0.93
FN1-204ENST00000356005 TRBV7-9A0A0J9YWB2 115 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 B3GALT5-AS1P59052 145 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 PKIGQ9Y2B9 76 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 SRSF1Q07955 248 aaKnown RBP eCLIP9.26□□□□□ -0.932e-6■□□□□ 8.6
FN1-204ENST00000356005 LINC01559Q495D7 138 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 ZNF362Q5T0B9 420 aaPredicted RBP9.26□□□□□ -0.93
FN1-204ENST00000356005 C18orf12Q96KH6 178 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 IL36BQ9NZH7 164 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 GCSAMLQ5JQS6 135 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 ACTL10Q5JWF8 245 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 RNF182Q8N6D2 247 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 GAFA1Q96PS6 74 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 PGPEP1Q9NXJ5 209 aa9.26□□□□□ -0.93
FN1-204ENST00000356005 SIGLEC9Q9Y336 463 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms