RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ZNF491Q8N8L2 437 aa13.46□□□□□ -0.25
VPS13B-201ENST00000355155 PAXXQ9BUH6 204 aa13.46□□□□□ -0.25
VPS13B-201ENST00000355155 HIGD1AQ9Y241 93 aa13.46□□□□□ -0.25
VPS13B-201ENST00000355155 SCGB2A1O75556 95 aa13.46□□□□□ -0.25
VPS13B-201ENST00000355155 RD3LP0DJH9 198 aa13.46□□□□□ -0.25
VPS13B-201ENST00000355155 RNF223E7ERA6 249 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 UNQ5815/PRO19632Q6UWF5 114 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 S100A7AQ86SG5 101 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 NECAP1Q8NC96 275 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 IGHV3OR16-10A0A075B7F0 116 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 UBE2G2P60604 165 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 IQCF2Q8IXL9 164 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 SHANK2-AS3Q9BTD1 123 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 TRAV5A0A0B4J249 113 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 FAM223BA6NKX1 122 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 CST9LP1Q5W188 147 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 FAM223AQ8IWN6 122 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 C2CD4CQ8TF44 421 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 FBXL7Q9UJT9 491 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 RNF24Q9Y225 148 aa13.45□□□□□ -0.26
VPS13B-201ENST00000355155 OR7C2O60412 319 aa13.44□□□□□ -0.26
VPS13B-201ENST00000355155 OR1B1Q8NGR6 318 aa13.44□□□□□ -0.26
VPS13B-201ENST00000355155 SLC25A39Q9BZJ4 359 aaPredicted RBP13.44□□□□□ -0.26
VPS13B-201ENST00000355155 IGHV3-21A0A0B4J1V1 117 aa13.44□□□□□ -0.26
VPS13B-201ENST00000355155 GGTLC3B5MD39 225 aa13.44□□□□□ -0.26
VPS13B-201ENST00000355155 MRPS12O15235 138 aaKnown RBP13.44□□□□□ -0.26
VPS13B-201ENST00000355155 MT-ND4LP03901 98 aa13.44□□□□□ -0.26
VPS13B-201ENST00000355155 OR5R1Q8NH85 324 aa13.44□□□□□ -0.26
VPS13B-201ENST00000355155 C20orf24Q9BUV8 137 aa13.44□□□□□ -0.26
VPS13B-201ENST00000355155 GSX1Q9H4S2 264 aaPredicted RBP13.44□□□□□ -0.26
VPS13B-201ENST00000355155 TRBV7-1A0A0A6YYK4 115 aa13.43□□□□□ -0.26
VPS13B-201ENST00000355155 H3BUX3 64 aa13.43□□□□□ -0.26
VPS13B-201ENST00000355155 PPIFP30405 207 aaKnown RBP13.43□□□□□ -0.26
VPS13B-201ENST00000355155 UBE2L3P68036 154 aaKnown RBP13.43□□□□□ -0.26
VPS13B-201ENST00000355155 CFHR3Q02985 330 aa13.43□□□□□ -0.26
VPS13B-201ENST00000355155 CYB5R2Q6BCY4 276 aa13.43□□□□□ -0.26
VPS13B-201ENST00000355155 OR5T1Q8NG75 326 aa13.43□□□□□ -0.26
VPS13B-201ENST00000355155 ANAPC16Q96DE5 110 aa13.43□□□□□ -0.26
VPS13B-201ENST00000355155 COL12A1Q99715 3063 aa13.43□□□□□ -0.26
VPS13B-201ENST00000355155 TRAV41A0A0B4J266 112 aa13.43□□□□□ -0.26
VPS13B-201ENST00000355155 SCO2A0A1W2PP80 73 aa13.43□□□□□ -0.26
VPS13B-201ENST00000355155 GNG7O60262 68 aa13.43□□□□□ -0.26
VPS13B-201ENST00000355155 CTSGP08311 255 aa13.43□□□□□ -0.26
VPS13B-201ENST00000355155 HIST1H2BAQ96A08 127 aa13.43□□□□□ -0.26
VPS13B-201ENST00000355155 LINC01548A6NM66 108 aa13.42□□□□□ -0.26
VPS13B-201ENST00000355155 NDUFB4O95168 129 aa13.42□□□□□ -0.26
VPS13B-201ENST00000355155 TGFAP01135 160 aa13.42□□□□□ -0.26
VPS13B-201ENST00000355155 CEBPGP53567 150 aa13.42□□□□□ -0.26
VPS13B-201ENST00000355155 LINC01551Q86U37 167 aa13.42□□□□□ -0.26
VPS13B-201ENST00000355155 TEX29Q8N6K0 151 aa13.42□□□□□ -0.26
VPS13B-201ENST00000355155 RNF125Q96EQ8 232 aa13.42□□□□□ -0.26
VPS13B-201ENST00000355155 Q96MF0 132 aa13.42□□□□□ -0.26
VPS13B-201ENST00000355155 OR2J3O76001 311 aa13.42□□□□□ -0.26
VPS13B-201ENST00000355155 ORM2P19652 201 aa13.42□□□□□ -0.26
VPS13B-201ENST00000355155 IER3P46695 156 aa13.42□□□□□ -0.26
VPS13B-201ENST00000355155 Q8WTZ3 238 aa13.42□□□□□ -0.26
VPS13B-201ENST00000355155 ZNF329Q86UD4 541 aa13.41□□□□□ -0.26
VPS13B-201ENST00000355155 TMEM219Q86XT9 240 aa13.41□□□□□ -0.26
VPS13B-201ENST00000355155 ISOC2Q96AB3 205 aa13.41□□□□□ -0.26
VPS13B-201ENST00000355155 FOXC2Q99958 501 aa13.41□□□□□ -0.26
VPS13B-201ENST00000355155 SOX21Q9Y651 276 aaPredicted RBP13.41□□□□□ -0.26
VPS13B-201ENST00000355155 NUPL2O15504 423 aaKnown RBP13.41□□□□□ -0.26
VPS13B-201ENST00000355155 TAS2R60P59551 318 aa13.41□□□□□ -0.26
VPS13B-201ENST00000355155 Q6YL49 198 aa13.41□□□□□ -0.26
VPS13B-201ENST00000355155 IMMP2LQ96T52 175 aa13.41□□□□□ -0.26
VPS13B-201ENST00000355155 ZFYVE26Q68DK2 2539 aa13.41□□□□□ -0.26
VPS13B-201ENST00000355155 TMEM89A2RUT3 159 aa13.4□□□□□ -0.26
VPS13B-201ENST00000355155 S100A7P31151 101 aa13.4□□□□□ -0.26
VPS13B-201ENST00000355155 DEFB112Q30KQ8 113 aa13.4□□□□□ -0.26
VPS13B-201ENST00000355155 ARL6IP6Q8N6S5 226 aa13.4□□□□□ -0.26
VPS13B-201ENST00000355155 TMUB1Q9BVT8 246 aa13.4□□□□□ -0.26
VPS13B-201ENST00000355155 TRBV20OR9-2A0A075B6H5 130 aa13.4□□□□□ -0.26
VPS13B-201ENST00000355155 CLDN34H7C241 214 aa13.4□□□□□ -0.26
VPS13B-201ENST00000355155 HIST1H1EP10412 219 aaKnown RBP13.4□□□□□ -0.26
VPS13B-201ENST00000355155 RHOGP84095 191 aa13.4□□□□□ -0.26
VPS13B-201ENST00000355155 LYPD1Q8N2G4 141 aa13.4□□□□□ -0.26
VPS13B-201ENST00000355155 EEF1AKMT3Q96AZ1 226 aa13.4□□□□□ -0.26
VPS13B-201ENST00000355155 PYGO2Q9BRQ0 406 aa13.4□□□□□ -0.26
VPS13B-201ENST00000355155 ELOVL1Q9BW60 279 aa13.4□□□□□ -0.26
VPS13B-201ENST00000355155 IGLC2P0DOY2 106 aa13.4□□□□□ -0.27
VPS13B-201ENST00000355155 PYYP10082 97 aa13.4□□□□□ -0.27
VPS13B-201ENST00000355155 ADMP35318 185 aa13.4□□□□□ -0.27
VPS13B-201ENST00000355155 LYZP61626 148 aa13.4□□□□□ -0.27
VPS13B-201ENST00000355155 ZNF600Q6ZNG1 722 aa13.4□□□□□ -0.27
VPS13B-201ENST00000355155 C1QL4Q86Z23 238 aa13.4□□□□□ -0.27
VPS13B-201ENST00000355155 SMIM12Q96EX1 92 aa13.4□□□□□ -0.27
VPS13B-201ENST00000355155 TRBV6-1A0A0K0K1D8 114 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 PPP1R2P9O14990 202 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 IGLV1-40P01703 118 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 AKR1C3P42330 323 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 ELOBQ15370 118 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 ECSCRQ19T08 205 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 Q56UQ5 140 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 IGF2BP2-AS1Q96M15 143 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 CCDC140Q96MF4 163 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 KLF12Q9Y4X4 402 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 G3V318 75 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 OR10J4P0C629 311 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 C15orf32Q32M92 178 aa13.39□□□□□ -0.27
VPS13B-201ENST00000355155 USMG5Q96IX5 58 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms