RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 ZNF474Q6S9Z5 364 aaPredicted RBP4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 SS18Q15532 418 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 UBE2E2Q96LR5 201 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 TIMM23O14925 209 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 A0A0G2JMM0 328 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 A0A1W2PPB8 328 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 A0A1W2PRS3 328 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 KIR3DP1A8MWS1 328 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 LYNX1G3V0Z9 82 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 LYNX1P0DP58 116 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 SMIM10L1P0DMW3 83 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 CGB7P0DN87 165 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 LINC01559Q495D7 138 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 SMIM10Q96HG1 83 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 GSN-AS1Q9NRJ2 163 aa4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 CHCHD2Q9Y6H1 151 aaPredicted RBP4.81□□□□□ -1.64
SRGAP1-201ENST00000355086 PRTN3P24158 256 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 IFITM3Q01628 133 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 ZNF497Q6ZNH5 498 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 ZNF114Q8NC26 417 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 RTBDNQ9BSG5 229 aaPredicted RBP4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 LSM4Q9Y4Z0 139 aaKnown RBP4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 C15orf32Q32M92 178 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 LCNL1Q6ZST4 164 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 TRAV13-1A0A0B4J241 112 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 KLHL30-AS1Q8NEE0 82 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 LHBP01229 141 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 TMEM170AQ8WVE7 144 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 STRCQ7RTU9 1775 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 TET1Q8NFU7 2136 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 C1QTNF9P0C862 333 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 LINC01590Q5TEZ4 76 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 TSKUQ8WUA8 353 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 VCYO14598 125 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 CGB3P0DN86 165 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 TRBV7-1A0A0A6YYK4 115 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 SRRM4A7MD48 611 aaKnown RBP4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 MORN2Q502X0 79 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 LURAP1LQ8IV03 231 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 RPL15P61313 204 aaKnown RBP4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 TRAV41A0A0B4J266 112 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 A0A1W2PRE2 83 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 VMO1Q7Z5L0 202 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 LY6DQ14210 128 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 TRAV8-3A0A0A6YYJ7 113 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 TRAV5A0A0B4J249 113 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 SORL1Q92673 2214 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 GNB1LQ9BYB4 327 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 SMPXQ9UHP9 88 aa4.8□□□□□ -1.64
SRGAP1-201ENST00000355086 FCN3O75636 299 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 FAM166AQ6J272 317 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 NCR2O95944 276 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 DLX4Q92988 240 aaPredicted RBP4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 C4orf51C9J302 202 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 MRAPQ8TCY5 172 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 CTHRC1Q96CG8 243 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 C18orf12Q96KH6 178 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 RASL11AQ6T310 242 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 PIP4P2Q8N4L2 257 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 CRIM1Q9NZV1 1036 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 H3BMM0 161 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 UBE2WQ96B02 151 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 C1QTNF4Q9BXJ3 329 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 QSER1Q2KHR3 1735 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 DEPPQ9NTK1 212 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 EFNB3Q15768 340 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 GAGE2AQ6NT46 116 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 TEX38Q6PEX7 206 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 C1QL4Q86Z23 238 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 MBNL3Q9NUK0 354 aaKnown RBP4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 RNF114Q9Y508 228 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 MYMXA0A1B0GTQ4 84 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 D6R8Y8 96 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 KIF13BQ9NQT8 1826 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 PMS2P5A8MQ11 134 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 ZNF561-AS1K7EIQ3 104 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 FAM90A2PQ658T7 463 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 NKAPP1Q8N9T2 125 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 KLRD1Q13241 179 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 CARHSP1Q9Y2V2 147 aaKnown RBP4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 COL22A1Q8NFW1 1626 aaPredicted RBP4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 MED13Q9UHV7 2174 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 PRB4P10163 310 aaPredicted RBP4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 SPSB3Q6PJ21 355 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 CSTL1Q9H114 145 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 PRDM6Q9NQX0 595 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 SLC25A39Q9BZJ4 359 aaPredicted RBP4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 THAP8Q8NA92 274 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 TNFRSF14Q92956 283 aa4.79□□□□□ -1.64
SRGAP1-201ENST00000355086 ZNF883P0CG24 379 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 LHFPL4Q7Z7J7 247 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 TRBV6-7A0A0A0MS04 114 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 IGKV1D-43A0A0B4J1Z2 117 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 PSG1P11464 419 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 OR10W1Q8NGF6 305 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 KMT2EQ8IZD2 1858 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 PRIMA1Q86XR5 153 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 OCC1Q8TAD7 63 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 TIMM21Q9BVV7 248 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms