RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 CCL21O00585 134 aa14.42□□□□□ -0.1
SPAST-202ENST00000345662 IGLV3-19P01714 112 aa14.42□□□□□ -0.1
SPAST-202ENST00000345662 CCL3L1P16619 93 aa14.42□□□□□ -0.1
SPAST-202ENST00000345662 IGHV3OR16-8A0A075B7F1 116 aa14.42□□□□□ -0.1
SPAST-202ENST00000345662 LOC102723996A0A087X1L8 192 aa14.42□□□□□ -0.1
SPAST-202ENST00000345662 TCRAP04437 139 aa14.42□□□□□ -0.1
SPAST-202ENST00000345662 KLF17Q5JT82 389 aaPredicted RBP14.42□□□□□ -0.1
SPAST-202ENST00000345662 APC2O95996 2303 aa14.42□□□□□ -0.1
SPAST-202ENST00000345662 RRN3P1Q2M238 152 aa14.42□□□□□ -0.1
SPAST-202ENST00000345662 Q6ZWC4 215 aa14.42□□□□□ -0.1
SPAST-202ENST00000345662 ARHGEF17Q96PE2 2063 aaPredicted RBP14.42□□□□□ -0.1
SPAST-202ENST00000345662 RNF115Q9Y4L5 304 aa14.41□□□□□ -0.1
SPAST-202ENST00000345662 PAX1P15863 534 aa14.41□□□□□ -0.1
SPAST-202ENST00000345662 PPP1R27Q86WC6 154 aa14.41□□□□□ -0.1
SPAST-202ENST00000345662 TRAV2A0A0B4J234 112 aa14.41□□□□□ -0.1
SPAST-202ENST00000345662 B9A039 149 aa14.41□□□□□ -0.1
SPAST-202ENST00000345662 CLPSP04118 112 aa14.41□□□□□ -0.1
SPAST-202ENST00000345662 DLX4Q92988 240 aaPredicted RBP14.41□□□□□ -0.1
SPAST-202ENST00000345662 IGKV3-20P01619 116 aa14.4□□□□□ -0.1
SPAST-202ENST00000345662 PPIFP30405 207 aaKnown RBP14.4□□□□□ -0.1
SPAST-202ENST00000345662 LAGE3Q14657 143 aa14.4□□□□□ -0.1
SPAST-202ENST00000345662 ATP1A1-AS1Q5TC04 95 aa14.4□□□□□ -0.1
SPAST-202ENST00000345662 IGHV3OR16-12A0A075B7B8 117 aa14.4□□□□□ -0.1
SPAST-202ENST00000345662 PSPNO60542 156 aa14.4□□□□□ -0.1
SPAST-202ENST00000345662 ADAMTSL5Q6ZMM2 481 aa14.4□□□□□ -0.1
SPAST-202ENST00000345662 ERG28Q9UKR5 140 aa14.4□□□□□ -0.1
SPAST-202ENST00000345662 GFRA3O60609 400 aa14.4□□□□□ -0.1
SPAST-202ENST00000345662 PSG3Q16557 428 aa14.4□□□□□ -0.1
SPAST-202ENST00000345662 C18orf32Q8TCD1 76 aa14.4□□□□□ -0.1
SPAST-202ENST00000345662 TNS1Q9HBL0 1735 aaKnown RBP14.4□□□□□ -0.1
SPAST-202ENST00000345662 SMAD7O15105 426 aaKnown RBP14.4□□□□□ -0.1
SPAST-202ENST00000345662 NCR2O95944 276 aa14.4□□□□□ -0.1
SPAST-202ENST00000345662 ZNF138P52744 262 aa14.39□□□□□ -0.11
SPAST-202ENST00000345662 YPEL3P61236 119 aaPredicted RBP14.39□□□□□ -0.11
SPAST-202ENST00000345662 ASCL4Q6XD76 172 aa14.39□□□□□ -0.11
SPAST-202ENST00000345662 TRGV3P03979 118 aa14.39□□□□□ -0.11
SPAST-202ENST00000345662 PLNP26678 52 aa14.39□□□□□ -0.11
SPAST-202ENST00000345662 IFI27P40305 119 aaPredicted RBP14.39□□□□□ -0.11
SPAST-202ENST00000345662 FAM231BA6NCW3 169 aa14.39□□□□□ -0.11
SPAST-202ENST00000345662 CD300EQ496F6 205 aaPredicted RBP14.39□□□□□ -0.11
SPAST-202ENST00000345662 TRAV3A0A0B4J244 114 aa14.39□□□□□ -0.11
SPAST-202ENST00000345662 A0A1B0GWJ7 208 aa14.39□□□□□ -0.11
SPAST-202ENST00000345662 LYZL1Q6UWQ5 148 aa14.39□□□□□ -0.11
SPAST-202ENST00000345662 NPIPB5A8MRT5 1133 aa14.38□□□□□ -0.11
SPAST-202ENST00000345662 RNASE4P34096 147 aaKnown RBP14.38□□□□□ -0.11
SPAST-202ENST00000345662 MCRIP2Q9BUT9 160 aaKnown RBP14.38□□□□□ -0.11
SPAST-202ENST00000345662 LINC01549A6NIU2 74 aa14.38□□□□□ -0.11
SPAST-202ENST00000345662 EFEMP2O95967 443 aa14.38□□□□□ -0.11
SPAST-202ENST00000345662 PRTN3P24158 256 aa14.38□□□□□ -0.11
SPAST-202ENST00000345662 RNF182Q8N6D2 247 aa14.38□□□□□ -0.11
SPAST-202ENST00000345662 PRR7Q8TB68 274 aa14.38□□□□□ -0.11
SPAST-202ENST00000345662 VOPP1Q96AW1 172 aa14.38□□□□□ -0.11
SPAST-202ENST00000345662 NCOR1P1Q9H4R4 102 aa14.38□□□□□ -0.11
SPAST-202ENST00000345662 IGKV3OR2-268A0A0C4DH90 116 aa14.38□□□□□ -0.11
SPAST-202ENST00000345662 RSPO3Q9BXY4 272 aaPredicted RBP14.38□□□□□ -0.11
SPAST-202ENST00000345662 YAE1D1Q9NRH1 226 aa14.38□□□□□ -0.11
SPAST-202ENST00000345662 LINC00473A8K010 186 aa14.37□□□□□ -0.11
SPAST-202ENST00000345662 SPINK8P0C7L1 97 aa14.37□□□□□ -0.11
SPAST-202ENST00000345662 EXOC3-AS1Q8N2X6 119 aa14.37□□□□□ -0.11
SPAST-202ENST00000345662 NBR2O15453 112 aa14.37□□□□□ -0.11
SPAST-202ENST00000345662 TET1Q8NFU7 2136 aa14.37□□□□□ -0.11
SPAST-202ENST00000345662 TRAV12-3A0A0B4J271 114 aa14.37□□□□□ -0.11
SPAST-202ENST00000345662 DOCK6Q96HP0 2047 aa14.37□□□□□ -0.11
SPAST-202ENST00000345662 MMP23AO75900 390 aa14.37□□□□□ -0.11
SPAST-202ENST00000345662 FXYD7P58549 80 aa14.37□□□□□ -0.11
SPAST-202ENST00000345662 CLEC19AQ6UXS0 136 aa14.37□□□□□ -0.11
SPAST-202ENST00000345662 LRRK1Q38SD2 2015 aa14.37□□□□□ -0.11
SPAST-202ENST00000345662 TRBV7-9A0A0J9YWB2 115 aa14.36□□□□□ -0.11
SPAST-202ENST00000345662 EPOPA6NHQ4 379 aa14.36□□□□□ -0.11
SPAST-202ENST00000345662 PMS2P5A8MQ11 134 aa14.36□□□□□ -0.11
SPAST-202ENST00000345662 ZC2HC1BQ5TFG8 222 aa14.36□□□□□ -0.11
SPAST-202ENST00000345662 NUP37Q8NFH4 326 aa14.36□□□□□ -0.11
SPAST-202ENST00000345662 CHAC1Q9BUX1 264 aa14.36□□□□□ -0.11
SPAST-202ENST00000345662 APOBEC3AP31941 199 aaPredicted RBP14.36□□□□□ -0.11
SPAST-202ENST00000345662 FAM27E3Q08E93 113 aa14.36□□□□□ -0.11
SPAST-202ENST00000345662 ZNF726P1Q15940 193 aa14.36□□□□□ -0.11
SPAST-202ENST00000345662 LHFPL4Q7Z7J7 247 aa14.36□□□□□ -0.11
SPAST-202ENST00000345662 SIP14410 1827 aa14.36□□□□□ -0.11
SPAST-202ENST00000345662 PAX9P55771 341 aa14.36□□□□□ -0.11
SPAST-202ENST00000345662 RPUSD1Q9UJJ7 312 aaKnown RBP14.36□□□□□ -0.11
SPAST-202ENST00000345662 TRAV21A0A0B4J279 112 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 C17orf100A8MU93 164 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 CNTFRP26992 372 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 CRIPAKQ8N1N5 446 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 SLC25A39Q9BZJ4 359 aaPredicted RBP14.35□□□□□ -0.11
SPAST-202ENST00000345662 MED12Q93074 2177 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 C10orf55Q5SWW7 151 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 Q6P435 159 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 C1orf147Q96MC9 270 aaPredicted RBP14.35□□□□□ -0.11
SPAST-202ENST00000345662 TMEM133Q9H2Q1 129 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 CSRP2Q16527 193 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 CDPF1Q6NVV7 123 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 TEX43Q6ZNM6 134 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 DUX5Q96PT3 197 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 TRGV9Q99603 122 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 FNDC10F2Z333 226 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 TMEM101Q96IK0 257 aa14.35□□□□□ -0.11
SPAST-202ENST00000345662 SRRM5B3KS81 715 aa14.34□□□□□ -0.11
SPAST-202ENST00000345662 FOXG1P55316 489 aaPredicted RBP14.34□□□□□ -0.11
SPAST-202ENST00000345662 ATXN8Q156A1 80 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms