RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 NHSQ6T4R5 1651 aa14.82□□□□□ -0.04
SMAD4-201ENST00000342988 C9orf40Q8IXQ3 194 aa14.81□□□□□ -0.04
SMAD4-201ENST00000342988 RPRMLQ8N4K4 120 aa14.81□□□□□ -0.04
SMAD4-201ENST00000342988 C8orf46Q8TAG6 207 aa14.81□□□□□ -0.04
SMAD4-201ENST00000342988 TSKUQ8WUA8 353 aa14.81□□□□□ -0.04
SMAD4-201ENST00000342988 TRAV25A0A0B4J276 109 aa14.81□□□□□ -0.04
SMAD4-201ENST00000342988 TNFSF13O75888 250 aa14.81□□□□□ -0.04
SMAD4-201ENST00000342988 PCOLCEQ15113 449 aa14.81□□□□□ -0.04
SMAD4-201ENST00000342988 ACP7Q6ZNF0 438 aa14.81□□□□□ -0.04
SMAD4-201ENST00000342988 NBL1P41271 181 aa14.8□□□□□ -0.04
SMAD4-201ENST00000342988 UBE2V1Q13404 147 aa14.8□□□□□ -0.04
SMAD4-201ENST00000342988 ZNF831Q5JPB2 1677 aa14.8□□□□□ -0.04
SMAD4-201ENST00000342988 PAX8Q06710 450 aa14.8□□□□□ -0.04
SMAD4-201ENST00000342988 FOXL1Q12952 345 aa14.8□□□□□ -0.04
SMAD4-201ENST00000342988 C22orf46C9J442 243 aa14.8□□□□□ -0.04
SMAD4-201ENST00000342988 ZIC1Q15915 447 aa14.8□□□□□ -0.04
SMAD4-201ENST00000342988 KIR3DS1Q14943 382 aa14.8□□□□□ -0.04
SMAD4-201ENST00000342988 ADAMTSL5Q6ZMM2 481 aa14.8□□□□□ -0.04
SMAD4-201ENST00000342988 EXPH5Q8NEV8 1989 aa14.79□□□□□ -0.04
SMAD4-201ENST00000342988 H3BQ85 93 aa14.79□□□□□ -0.04
SMAD4-201ENST00000342988 PSG1P11464 419 aa14.79□□□□□ -0.04
SMAD4-201ENST00000342988 IGHV1-45A0A0A0MS14 117 aa14.79□□□□□ -0.04
SMAD4-201ENST00000342988 HAMPP81172 84 aa14.79□□□□□ -0.04
SMAD4-201ENST00000342988 C7orf69Q9H7B7 122 aa14.79□□□□□ -0.04
SMAD4-201ENST00000342988 A0A1W2PQF6 199 aa14.79□□□□□ -0.04
SMAD4-201ENST00000342988 PRSS23O95084 383 aa14.79□□□□□ -0.04
SMAD4-201ENST00000342988 CGB7P0DN87 165 aa14.79□□□□□ -0.04
SMAD4-201ENST00000342988 NANOS3P60323 173 aaKnown RBP14.79□□□□□ -0.04
SMAD4-201ENST00000342988 SLC25A39Q9BZJ4 359 aaPredicted RBP14.79□□□□□ -0.04
SMAD4-201ENST00000342988 TRGV1A0A0A0MS02 117 aa14.79□□□□□ -0.04
SMAD4-201ENST00000342988 LINC00312Q9Y6C7 94 aa14.79□□□□□ -0.04
SMAD4-201ENST00000342988 CEP192Q8TEP8 1941 aa14.79□□□□□ -0.04
SMAD4-201ENST00000342988 GUSBP1Q15486 140 aa14.79□□□□□ -0.04
SMAD4-201ENST00000342988 TRBV5-5A0A0J9YX44 114 aa14.78□□□□□ -0.04
SMAD4-201ENST00000342988 CGB3P0DN86 165 aa14.78□□□□□ -0.04
SMAD4-201ENST00000342988 TFF3Q07654 80 aa14.78□□□□□ -0.04
SMAD4-201ENST00000342988 RPL39P5Q59GN2 51 aa14.78□□□□□ -0.04
SMAD4-201ENST00000342988 A0A1W2PRE2 83 aa14.78□□□□□ -0.04
SMAD4-201ENST00000342988 ZXDCQ2QGD7 858 aaPredicted RBP14.78□□□□□ -0.04
SMAD4-201ENST00000342988 IGHV3OR16-10A0A075B7F0 116 aa14.78□□□□□ -0.04
SMAD4-201ENST00000342988 F8W1H4 67 aa14.78□□□□□ -0.04
SMAD4-201ENST00000342988 KIAA0040Q15053 153 aa14.78□□□□□ -0.04
SMAD4-201ENST00000342988 K7ERS5 55 aa14.78□□□□□ -0.04
SMAD4-201ENST00000342988 Q6ZS52 159 aa14.78□□□□□ -0.04
SMAD4-201ENST00000342988 C1QAP02745 245 aa14.78□□□□□ -0.04
SMAD4-201ENST00000342988 LTBRP36941 435 aa14.78□□□□□ -0.04
SMAD4-201ENST00000342988 H2BFSP57053 126 aa14.78□□□□□ -0.04
SMAD4-201ENST00000342988 UBE2CO00762 179 aa14.77□□□□□ -0.04
SMAD4-201ENST00000342988 GP6Q9HCN6 339 aa14.77□□□□□ -0.04
SMAD4-201ENST00000342988 TRAV13-2A0A0B4J235 113 aa14.77□□□□□ -0.05
SMAD4-201ENST00000342988 KLRD1Q13241 179 aa14.77□□□□□ -0.05
SMAD4-201ENST00000342988 MYEOVQ96EZ4 313 aa14.77□□□□□ -0.05
SMAD4-201ENST00000342988 TRBV7-1A0A0A6YYK4 115 aa14.77□□□□□ -0.05
SMAD4-201ENST00000342988 ACTL10Q5JWF8 245 aa14.77□□□□□ -0.05
SMAD4-201ENST00000342988 C1orf100Q5SVJ3 147 aa14.77□□□□□ -0.05
SMAD4-201ENST00000342988 LY6G5BQ8NDX9 201 aa14.77□□□□□ -0.05
SMAD4-201ENST00000342988 TMEM242Q9NWH2 141 aa14.77□□□□□ -0.05
SMAD4-201ENST00000342988 IGHMP01871 453 aa14.77□□□□□ -0.05
SMAD4-201ENST00000342988 Q6ZT83 130 aa14.77□□□□□ -0.05
SMAD4-201ENST00000342988 ZAR1Q86SH2 424 aa14.77□□□□□ -0.05
SMAD4-201ENST00000342988 CSPG4Q6UVK1 2322 aa14.77□□□□□ -0.05
SMAD4-201ENST00000342988 SRP19P09132 144 aaKnown RBP14.77□□□□□ -0.05
SMAD4-201ENST00000342988 METRNQ9UJH8 293 aa14.77□□□□□ -0.05
SMAD4-201ENST00000342988 PPDPFLQ8WWR9 84 aa14.76□□□□□ -0.05
SMAD4-201ENST00000342988 TEX48A0A1B0GUV7 120 aa14.76□□□□□ -0.05
SMAD4-201ENST00000342988 MARF1Q9Y4F3 1742 aaKnown RBP14.76□□□□□ -0.05
SMAD4-201ENST00000342988 COL22A1Q8NFW1 1626 aaPredicted RBP14.76□□□□□ -0.05
SMAD4-201ENST00000342988 PSG3Q16557 428 aa14.76□□□□□ -0.05
SMAD4-201ENST00000342988 VN1R4Q7Z5H5 301 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 PPP1R3EQ9H7J1 279 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 SIGLEC14Q08ET2 396 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 SLC25A47Q6Q0C1 308 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 MP68P56378 58 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 FAM166AQ6J272 317 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 FAM60AQ9NP50 221 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 RPL23P62829 140 aaKnown RBP14.75□□□□□ -0.05
SMAD4-201ENST00000342988 DSCAMO60469 2012 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 IGHG2P01859 326 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 ZNF876PQ49A33 203 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 C8orf31Q8N9H6 132 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 C1orf159Q96HA4 380 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 PRCDQ00LT1 54 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 MSRB3Q8IXL7 192 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 NABP1Q96AH0 204 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 SHISA4Q96DD7 197 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 LINC00477Q96M19 166 aa14.75□□□□□ -0.05
SMAD4-201ENST00000342988 A0A1B0GTL3 188 aa14.74□□□□□ -0.05
SMAD4-201ENST00000342988 PSG8Q9UQ74 426 aa14.74□□□□□ -0.05
SMAD4-201ENST00000342988 LINC01565O15544 149 aa14.74□□□□□ -0.05
SMAD4-201ENST00000342988 TGIF1Q15583 401 aa14.74□□□□□ -0.05
SMAD4-201ENST00000342988 MIR17HGQ75NE6 70 aa14.74□□□□□ -0.05
SMAD4-201ENST00000342988 SIPA1L1O43166 1804 aa14.74□□□□□ -0.05
SMAD4-201ENST00000342988 D6R8Y8 96 aa14.74□□□□□ -0.05
SMAD4-201ENST00000342988 SAP30O75446 220 aa14.74□□□□□ -0.05
SMAD4-201ENST00000342988 CRLF1O75462 422 aa14.74□□□□□ -0.05
SMAD4-201ENST00000342988 FUSP35637 526 aaKnown RBP eCLIP14.74□□□□□ -0.05
SMAD4-201ENST00000342988 IMMP1LQ96LU5 166 aa14.74□□□□□ -0.05
SMAD4-201ENST00000342988 LSM4Q9Y4Z0 139 aaKnown RBP14.74□□□□□ -0.05
SMAD4-201ENST00000342988 PRR19A6NJB7 356 aa14.73□□□□□ -0.05
SMAD4-201ENST00000342988 ZNF708P17019 499 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms