RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 FAM223BA6NKX1 122 aa12.52□□□□□ -0.4
COL11A2-201ENST00000341947 NAPSAO96009 420 aa12.52□□□□□ -0.4
COL11A2-201ENST00000341947 INSP01308 110 aa12.52□□□□□ -0.4
COL11A2-201ENST00000341947 SELLP14151 372 aa12.52□□□□□ -0.4
COL11A2-201ENST00000341947 MPZP25189 248 aa12.52□□□□□ -0.4
COL11A2-201ENST00000341947 FAM223AQ8IWN6 122 aa12.52□□□□□ -0.4
COL11A2-201ENST00000341947 FXYD7P58549 80 aa12.52□□□□□ -0.41
COL11A2-201ENST00000341947 SRSF6Q13247 344 aaKnown RBP12.52□□□□□ -0.41
COL11A2-201ENST00000341947 ZNF876PQ49A33 203 aa12.52□□□□□ -0.41
COL11A2-201ENST00000341947 LCNL1Q6ZST4 164 aa12.52□□□□□ -0.41
COL11A2-201ENST00000341947 C1QL4Q86Z23 238 aa12.52□□□□□ -0.41
COL11A2-201ENST00000341947 CD177Q8N6Q3 437 aa12.52□□□□□ -0.41
COL11A2-201ENST00000341947 IGHV3-53P01767 116 aa12.52□□□□□ -0.41
COL11A2-201ENST00000341947 FOXG1P55316 489 aaPredicted RBP12.52□□□□□ -0.41
COL11A2-201ENST00000341947 PAQR4Q8N4S7 273 aaPredicted RBP12.52□□□□□ -0.41
COL11A2-201ENST00000341947 SPAG8Q99932 426 aaPredicted RBP12.52□□□□□ -0.41
COL11A2-201ENST00000341947 ATXN8Q156A1 80 aa12.52□□□□□ -0.41
COL11A2-201ENST00000341947 IFI27L1Q96BM0 104 aa12.52□□□□□ -0.41
COL11A2-201ENST00000341947 DERL1Q9BUN8 251 aa12.52□□□□□ -0.41
COL11A2-201ENST00000341947 TPRP12270 2363 aaKnown RBP12.52□□□□□ -0.41
COL11A2-201ENST00000341947 PATJQ8NI35 1801 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 TRAV9-2A0A087WT02 112 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 SRRM4A7MD48 611 aaKnown RBP12.51□□□□□ -0.41
COL11A2-201ENST00000341947 NABP1Q96AH0 204 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 TRGV9Q99603 122 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 CLDN16Q9Y5I7 305 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 CKAP5Q14008 2032 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 PRB4P10163 310 aaPredicted RBP12.51□□□□□ -0.41
COL11A2-201ENST00000341947 MESP1Q9BRJ9 268 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 SMPXQ9UHP9 88 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 IGKV1-12A0A0C4DH73 117 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 TMEM238C9JI98 176 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 IGKV1D-12P01611 117 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 ZNF138P52744 262 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 C3orf56Q8N813 242 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 LAMTOR2Q9Y2Q5 125 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 TOMM40O96008 361 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 FOXL1Q12952 345 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 C5orf64Q2M2E5 130 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 WFDC1Q9HC57 220 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 A0A087WV48 116 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 GATD1Q8NB37 220 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 RASL10AQ92737 203 aa12.51□□□□□ -0.41
COL11A2-201ENST00000341947 NDPQ00604 133 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 LINC01559Q495D7 138 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 PLXNA1Q9UIW2 1896 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 IGKV1D-8A0A087WSZ0 117 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 TEX43Q6ZNM6 134 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 EXOC3-AS1Q8N2X6 119 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 F8WEM9 126 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 BUB1B-PAK6H3BSN5 160 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 RIPPLY3P57055 190 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 LINC00477Q96M19 166 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 GGTLC1Q9BX51 225 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 VSIRQ9H7M9 311 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 GAFA1Q96PS6 74 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 CRIM1Q9NZV1 1036 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 PAX4O43316 350 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 FCN3O75636 299 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 GZMBP10144 247 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 NR2C2APQ86WQ0 139 aa12.5□□□□□ -0.41
COL11A2-201ENST00000341947 PIKFYVEQ9Y2I7 2098 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 SCN8AQ9UQD0 1980 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 ZNF236Q9UL36 1845 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 H0YJW9 148 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 DMRTA1Q5VZB9 504 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 OTOFQ9HC10 1997 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 F8VVB4 439 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 F8VWA3 439 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 EFNA2O43921 213 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 BTCP35070 178 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 PLEKHB2Q96CS7 222 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 ERG28Q9UKR5 140 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 PTPRFP10586 1907 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 Q0VFX4 171 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 FNDC4Q9H6D8 234 aaPredicted RBP12.49□□□□□ -0.41
COL11A2-201ENST00000341947 WDR90Q96KV7 1748 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 ERCC8Q13216 396 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 LY6G6FQ5SQ64 297 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 ORAOV1Q8WV07 137 aa12.49□□□□□ -0.41
COL11A2-201ENST00000341947 NPC2P61916 151 aa12.48□□□□□ -0.41
COL11A2-201ENST00000341947 SPATA31B1PQ5VZV4 182 aa12.48□□□□□ -0.41
COL11A2-201ENST00000341947 MS4A6AQ9H2W1 248 aa12.48□□□□□ -0.41
COL11A2-201ENST00000341947 J3QRE1 110 aa12.48□□□□□ -0.41
COL11A2-201ENST00000341947 MDS2Q8NDY4 140 aa12.48□□□□□ -0.41
COL11A2-201ENST00000341947 PSME4Q14997 1843 aa12.48□□□□□ -0.41
COL11A2-201ENST00000341947 NCR2O95944 276 aa12.48□□□□□ -0.41
COL11A2-201ENST00000341947 UBE2E2Q96LR5 201 aa12.48□□□□□ -0.41
COL11A2-201ENST00000341947 MBD3L4A6NDZ8 208 aaPredicted RBP12.47□□□□□ -0.41
COL11A2-201ENST00000341947 MBD3L3A6NE82 208 aaPredicted RBP12.47□□□□□ -0.41
COL11A2-201ENST00000341947 MBD3L5A6NJ08 208 aaPredicted RBP12.47□□□□□ -0.41
COL11A2-201ENST00000341947 SEC11AP67812 179 aa12.47□□□□□ -0.41
COL11A2-201ENST00000341947 ZNF474Q6S9Z5 364 aaPredicted RBP12.47□□□□□ -0.41
COL11A2-201ENST00000341947 MBD3L2Q8NHZ7 208 aaPredicted RBP12.47□□□□□ -0.41
COL11A2-201ENST00000341947 BRCA1P38398 1863 aaKnown RBP12.47□□□□□ -0.41
COL11A2-201ENST00000341947 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.47□□□□□ -0.41
COL11A2-201ENST00000341947 D6R8Y8 96 aa12.47□□□□□ -0.41
COL11A2-201ENST00000341947 PSPNO60542 156 aa12.47□□□□□ -0.41
COL11A2-201ENST00000341947 LYZL1Q6UWQ5 148 aa12.47□□□□□ -0.41
COL11A2-201ENST00000341947 SH2D1AO60880 128 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms