RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 ANAPC10Q9UM13 185 aa6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 A0A087WV48 116 aa6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 IGKV1D-13A0A0B4J2D9 117 aa6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 IGHV3-35A0A0C4DH35 117 aa6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 CRPP02741 224 aa6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 IGKV1-13P0DP09 117 aa6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 SRD5A1P18405 259 aa6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 CEACAM8P31997 349 aaPredicted RBP6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 TFF3Q07654 80 aa6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 ZNF415Q09FC8 603 aa6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 TMEM170BQ5T4T1 132 aa6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 MTURNQ8N3F0 131 aa6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 KIR3DL3Q8N743 410 aa6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 DMRTA2Q96SC8 542 aa6.36□□□□□ -1.39
ATP2B4-201ENST00000341360 TRGV4A0A0C4DH28 118 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 IGHV3-11P01762 117 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 CD7P09564 240 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 RNF224P0DH78 156 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 PLA2G5P39877 138 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 QRFPP83859 136 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 SRSF1Q07955 248 aaKnown RBP eCLIP6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 Q0VFX4 171 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 PDE6HQ13956 83 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 TMEM200BQ69YZ2 307 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 MIR17HGQ75NE6 70 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 OR5AN1Q8NGI8 311 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 LOC107984156A0A0G2JMH3 177 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 TNFSF13O75888 250 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 CLPSP04118 112 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 UBE2E1P51965 193 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 SDK2Q58EX2 2172 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 ARL17AQ8IVW1 177 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 F11RQ9Y624 299 aaKnown RBP6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 H3BVH4 76 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 SLC25A20O43772 301 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 IGKV3-20P01619 116 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 NRN1Q9NPD7 142 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 ALPK2Q86TB3 2170 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 ARHGEF17Q96PE2 2063 aaPredicted RBP6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 NDUFB8O95169 186 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 RNASE4P34096 147 aaKnown RBP6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 SUPT4H1P63272 117 aaKnown RBP6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 SLC25A2Q9BXI2 301 aa6.35□□□□□ -1.39
ATP2B4-201ENST00000341360 PLXND1Q9Y4D7 1925 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 C7orf71A4D174 169 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 BUB1B-PAK6H3BSN5 160 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 MSMBP08118 114 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 DPRXA6NFQ7 191 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 ZNHIT1O43257 154 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 TMEM50AO95807 157 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 CFHR2P36980 270 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 C15orf32Q32M92 178 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 NMSQ5H8A3 153 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 TMEM86BQ8N661 226 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 VGLL1Q99990 258 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 KIF26BQ2KJY2 2108 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 CACNA1DQ01668 2161 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 HELZP42694 1942 aaKnown RBP6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 ROS1P08922 2347 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 IGHV3OR16-13A0A075B7E8 117 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 TGIF2-C20orf24A0A0A6YYL0 155 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 IGHV3-74A0A0B4J1X5 117 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 SCO2A0A1W2PP80 73 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 H3BUX3 64 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 APOHP02749 345 aaPredicted RBP6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 CD55P08174 381 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 SCGB1A1P11684 91 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 TDGF1P13385 188 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 ZNF25P17030 456 aaPredicted RBP6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 RPL36AP83881 106 aaKnown RBP6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 RPL36ALQ969Q0 106 aaKnown RBP6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 CHCHD1Q96BP2 118 aaKnown RBP6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 GAFA1Q96PS6 74 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 PNRC2Q9NPJ4 139 aaKnown RBP6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 ZNF319Q9P2F9 582 aa6.34□□□□□ -1.39
ATP2B4-201ENST00000341360 MDC1Q14676 2089 aaKnown RBP6.34□□□□□ -1.4
ATP2B4-201ENST00000341360 IGKV1-12A0A0C4DH73 117 aa6.34□□□□□ -1.4
ATP2B4-201ENST00000341360 H0YJW9 148 aa6.34□□□□□ -1.4
ATP2B4-201ENST00000341360 H3BTX0 84 aa6.34□□□□□ -1.4
ATP2B4-201ENST00000341360 IGKV1D-12P01611 117 aa6.34□□□□□ -1.4
ATP2B4-201ENST00000341360 HBDP02042 147 aa6.34□□□□□ -1.4
ATP2B4-201ENST00000341360 SNRPCP09234 159 aaKnown RBP6.34□□□□□ -1.4
ATP2B4-201ENST00000341360 ZNF138P52744 262 aa6.34□□□□□ -1.4
ATP2B4-201ENST00000341360 MORN3Q6PF18 240 aaPredicted RBP6.34□□□□□ -1.4
ATP2B4-201ENST00000341360 OR13C6PQ8NH95 151 aa6.34□□□□□ -1.4
ATP2B4-201ENST00000341360 TSKUQ8WUA8 353 aa6.34□□□□□ -1.4
ATP2B4-201ENST00000341360 OTOGLQ3ZCN5 2332 aa6.34□□□□□ -1.4
ATP2B4-201ENST00000341360 SONP18583 2426 aaKnown RBP6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 IGHV3-48P01763 117 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 TYMSP04818 313 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 SMIM13P0DJ93 91 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 MALP21145 153 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 TMEM14EPQ6UXP3 125 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 PIP4P1Q86T03 277 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 LINC00311Q8N616 119 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 SEPSECSQ9HD40 501 aaKnown RBP6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 PEF1Q9UBV8 284 aaKnown RBP6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 ABCA1O95477 2261 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 A6NNC1 897 aa6.33□□□□□ -1.4
ATP2B4-201ENST00000341360 RHODO00212 210 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms