RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 BMPR1BO00238 502 aa11.65□□□□□ -0.55
TDP2-201ENST00000341060 ORM2P19652 201 aa11.65□□□□□ -0.55
TDP2-201ENST00000341060 DLX1P56177 255 aa11.65□□□□□ -0.55
TDP2-201ENST00000341060 TMEM183BQ1AE95 376 aa11.65□□□□□ -0.55
TDP2-201ENST00000341060 ZNF841Q6ZN19 808 aa11.65□□□□□ -0.55
TDP2-201ENST00000341060 SSBP3Q9BWW4 388 aaPredicted RBP11.65□□□□□ -0.55
TDP2-201ENST00000341060 CLEC7AQ9BXN2 247 aa11.65□□□□□ -0.55
TDP2-201ENST00000341060 GPX1P07203 203 aa11.64□□□□□ -0.55
TDP2-201ENST00000341060 SRIP30626 198 aa11.64□□□□□ -0.55
TDP2-201ENST00000341060 CDKN1AP38936 164 aa11.64□□□□□ -0.55
TDP2-201ENST00000341060 USF2Q15853 346 aaPredicted RBP11.64□□□□□ -0.55
TDP2-201ENST00000341060 KIAA1644Q3SXP7 199 aa11.64□□□□□ -0.55
TDP2-201ENST00000341060 PPP1R27Q86WC6 154 aa11.64□□□□□ -0.55
TDP2-201ENST00000341060 SMIM12Q96EX1 92 aa11.64□□□□□ -0.55
TDP2-201ENST00000341060 KCNS1Q96KK3 526 aa11.64□□□□□ -0.55
TDP2-201ENST00000341060 C7orf69Q9H7B7 122 aa11.64□□□□□ -0.55
TDP2-201ENST00000341060 INSIG2Q9Y5U4 225 aa11.64□□□□□ -0.55
TDP2-201ENST00000341060 RBP4P02753 201 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 PLP1P60201 277 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 UBE2G1P62253 170 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 GNG5P63218 68 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 SIGLECL1Q8N7X8 197 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 NUDT10Q8NFP7 164 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 NUDT11Q96G61 164 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 RCHY1Q96PM5 261 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 CHRDL1Q9BU40 450 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 ZNF331Q9NQX6 463 aaPredicted RBP11.63□□□□□ -0.55
TDP2-201ENST00000341060 EPDR1Q9UM22 224 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 APELAP0DMC3 54 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 GP9P14770 177 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 SSTP61278 116 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 C19orf35Q6ZS72 473 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 GRAMD2BQ96HH9 432 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 CBLN4Q9NTU7 201 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 KLF12Q9Y4X4 402 aa11.63□□□□□ -0.55
TDP2-201ENST00000341060 F11RQ9Y624 299 aaKnown RBP11.63□□□□□ -0.55
TDP2-201ENST00000341060 ACACBO00763 2458 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 PKD1L2Q7Z442 2459 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 TEX22C9J3V5 150 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 EREGO14944 169 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 ZNF253O75346 499 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 HYPMO75409 117 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 APCSP02743 223 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 SLC25A5P05141 298 aaKnown RBP11.62□□□□□ -0.55
TDP2-201ENST00000341060 HIST1H1EP10412 219 aaKnown RBP11.62□□□□□ -0.55
TDP2-201ENST00000341060 ASPHD1Q5U4P2 390 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 NUP35Q8NFH5 326 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 BLNKQ8WV28 456 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 TBL2Q9Y4P3 447 aaKnown RBP11.62□□□□□ -0.55
TDP2-201ENST00000341060 TACC2O95359 2948 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 LYNX1G3V0Z9 82 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 NBEAP1P0C6P0 100 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 LYNX1P0DP58 116 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 SLAQ13239 276 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 C20orf144Q9BQM9 153 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 ZNF586Q9NXT0 402 aa11.62□□□□□ -0.55
TDP2-201ENST00000341060 A0A1W2PS18 150 aa11.61□□□□□ -0.55
TDP2-201ENST00000341060 PGPA6NDG6 321 aa11.61□□□□□ -0.55
TDP2-201ENST00000341060 AMTP48728 403 aa11.61□□□□□ -0.55
TDP2-201ENST00000341060 PRB3Q04118 309 aaPredicted RBP11.61□□□□□ -0.55
TDP2-201ENST00000341060 PRR27Q6MZM9 219 aa11.61□□□□□ -0.55
TDP2-201ENST00000341060 MUC15Q8N387 334 aa11.61□□□□□ -0.55
TDP2-201ENST00000341060 C8orf46Q8TAG6 207 aa11.61□□□□□ -0.55
TDP2-201ENST00000341060 VN1R17PQ8TDU5 208 aa11.61□□□□□ -0.55
TDP2-201ENST00000341060 TSKUQ8WUA8 353 aa11.61□□□□□ -0.55
TDP2-201ENST00000341060 TMEM68Q96MH6 324 aa11.61□□□□□ -0.55
TDP2-201ENST00000341060 ATG101Q9BSB4 218 aa11.61□□□□□ -0.55
TDP2-201ENST00000341060 FBXL7Q9UJT9 491 aa11.61□□□□□ -0.55
TDP2-201ENST00000341060 LRBAP50851 2863 aa11.61□□□□□ -0.55
TDP2-201ENST00000341060 ABCA1O95477 2261 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 DCHS2Q6V1P9 2916 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 IGHV3-21A0A0B4J1V1 117 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 PPIAL4CA0A0B4J2A2 164 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 ZNF324O75467 553 aaPredicted RBP11.6□□□□□ -0.55
TDP2-201ENST00000341060 PPIAL4GP0DN37 164 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 TDRG1Q3Y452 100 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 C5orf17Q8NAS9 161 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 SRSF12Q8WXF0 261 aaKnown RBP11.6□□□□□ -0.55
TDP2-201ENST00000341060 RPEQ96AT9 228 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 GPR82Q96P67 336 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 FAM103A1Q9BTL3 118 aaKnown RBP11.6□□□□□ -0.55
TDP2-201ENST00000341060 MLST8Q9BVC4 326 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 SNHG12Q9BXW3 62 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 RNF114Q9Y508 228 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 ANKHD1Q8IWZ3 2542 aaKnown RBP11.6□□□□□ -0.55
TDP2-201ENST00000341060 LHFPL4Q7Z7J7 247 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 LINC01560Q8TB33 94 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 FMC1Q96HJ9 113 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 NEU1Q99519 415 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 RNF5Q99942 180 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 FBXL15Q9H469 300 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 NRN1Q9NPD7 142 aa11.6□□□□□ -0.55
TDP2-201ENST00000341060 HIGD1CA8MV81 97 aa11.59□□□□□ -0.55
TDP2-201ENST00000341060 RNF224P0DH78 156 aa11.59□□□□□ -0.55
TDP2-201ENST00000341060 CA7P43166 264 aa11.59□□□□□ -0.55
TDP2-201ENST00000341060 C18orf32Q8TCD1 76 aa11.59□□□□□ -0.55
TDP2-201ENST00000341060 MRPL27Q9P0M9 148 aaKnown RBP11.59□□□□□ -0.55
TDP2-201ENST00000341060 LY6LH3BQJ8 138 aa11.59□□□□□ -0.55
TDP2-201ENST00000341060 TOMM40O96008 361 aa11.59□□□□□ -0.55
TDP2-201ENST00000341060 LTAP01374 205 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms