RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SPARTQ8N0X7 666 aa6.85□□□□□ -1.31
ATXN3-201ENST00000340660 IL22RA2Q969J5 263 aa6.85□□□□□ -1.31
ATXN3-201ENST00000340660 NRBF2Q96F24 287 aa6.85□□□□□ -1.31
ATXN3-201ENST00000340660 HSD17B10Q99714 261 aaKnown RBP6.85□□□□□ -1.31
ATXN3-201ENST00000340660 GINS4Q9BRT9 223 aa6.85□□□□□ -1.31
ATXN3-201ENST00000340660 KCNK15Q9H427 330 aa6.85□□□□□ -1.31
ATXN3-201ENST00000340660 TAS2R8Q9NYW2 309 aa6.85□□□□□ -1.31
ATXN3-201ENST00000340660 PRO0255Q9UI72 69 aa6.85□□□□□ -1.31
ATXN3-201ENST00000340660 IGKV1-17P01599 117 aa6.84□□□□□ -1.31
ATXN3-201ENST00000340660 HSD17B1P14061 328 aa6.84□□□□□ -1.31
ATXN3-201ENST00000340660 GTF2A1P52655 376 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-201ENST00000340660 SRSF9Q13242 221 aaKnown RBP eCLIP6.84□□□□□ -1.31
ATXN3-201ENST00000340660 SLC35E1Q96K37 410 aa6.84□□□□□ -1.31
ATXN3-201ENST00000340660 TMEM59Q9BXS4 323 aa6.84□□□□□ -1.31
ATXN3-201ENST00000340660 SLC25A39Q9BZJ4 359 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-201ENST00000340660 EFCAB1Q9HAE3 211 aa6.84□□□□□ -1.31
ATXN3-201ENST00000340660 TAGLN3Q9UI15 199 aa6.84□□□□□ -1.31
ATXN3-201ENST00000340660 ARL2BPQ9Y2Y0 163 aa6.84□□□□□ -1.31
ATXN3-201ENST00000340660 BOLA2-SMG1P6H3BVE0 249 aa6.83□□□□□ -1.32
ATXN3-201ENST00000340660 DIRAS3O95661 229 aa6.83□□□□□ -1.32
ATXN3-201ENST00000340660 TAS2R31P59538 309 aa6.83□□□□□ -1.32
ATXN3-201ENST00000340660 CIRBPQ14011 172 aaKnown RBP6.83□□□□□ -1.32
ATXN3-201ENST00000340660 SYS1Q8N2H4 156 aa6.83□□□□□ -1.32
ATXN3-201ENST00000340660 OR1B1Q8NGR6 318 aa6.83□□□□□ -1.32
ATXN3-201ENST00000340660 CMSS1Q9BQ75 279 aaKnown RBP6.83□□□□□ -1.32
ATXN3-201ENST00000340660 NEBP20929 6669 aa6.83□□□□□ -1.32
ATXN3-201ENST00000340660 IGKV1D-13A0A0B4J2D9 117 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 FAM231BA6NCW3 169 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 FOXI3A8MTJ6 420 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-201ENST00000340660 SNURFLB1AK76 121 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 IGHV3-53P01767 116 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 IGKV1-13P0DP09 117 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 KRTAP10-6P60371 365 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-201ENST00000340660 TMED1Q13445 227 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 TIGITQ495A1 244 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 SFXN4Q6P4A7 337 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 MAFIPQ8WZ33 124 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 SIKE1Q9BRV8 207 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 MAGIXQ9H6Y5 334 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 RPRMQ9NS64 109 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 HHLA3Q9XRX5 114 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 NSG2Q9Y328 171 aa6.82□□□□□ -1.32
ATXN3-201ENST00000340660 A0A087WYN8 130 aa6.81□□□□□ -1.32
ATXN3-201ENST00000340660 CFC1BP0CG36 223 aa6.81□□□□□ -1.32
ATXN3-201ENST00000340660 NQO2P16083 231 aa6.81□□□□□ -1.32
ATXN3-201ENST00000340660 DAZ2Q13117 558 aaKnown RBP6.81□□□□□ -1.32
ATXN3-201ENST00000340660 XAF1Q6GPH4 301 aa6.81□□□□□ -1.32
ATXN3-201ENST00000340660 CDH26Q8IXH8 852 aa6.81□□□□□ -1.32
ATXN3-201ENST00000340660 SPAG16Q8N0X2 631 aa6.81□□□□□ -1.32
ATXN3-201ENST00000340660 PSORS1C2Q9UIG4 136 aa6.81□□□□□ -1.32
ATXN3-201ENST00000340660 OR51B2Q9Y5P1 312 aa6.81□□□□□ -1.32
ATXN3-201ENST00000340660 E5RGE8 158 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 H7BYZ3 331 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 ISLRO14498 428 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 PITX3O75364 302 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 CLN5O75503 358 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 LALBAP00709 142 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 TMEM50BP56557 158 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 INSL4Q14641 139 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 ZNF846Q147U1 533 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 SDIM1Q6ZPB5 146 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 LHFPL3Q86UP9 236 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 DMBX1Q8NFW5 382 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 OR6F1Q8NGZ6 308 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 ATP6V0E2Q8NHE4 81 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 C7orf33Q8WU49 177 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 TMEM56Q96MV1 263 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 CKLFQ9UBR5 152 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 FUT9Q9Y231 359 aa6.8□□□□□ -1.32
ATXN3-201ENST00000340660 A0A1W2PPK0 400 aa6.79□□□□□ -1.32
ATXN3-201ENST00000340660 HLA-DQB1P01920 261 aa6.79□□□□□ -1.32
ATXN3-201ENST00000340660 FCGR3AP08637 254 aa6.79□□□□□ -1.32
ATXN3-201ENST00000340660 MT1HP80294 61 aa6.79□□□□□ -1.32
ATXN3-201ENST00000340660 ACBD7Q8N6N7 88 aa6.79□□□□□ -1.32
ATXN3-201ENST00000340660 LGALS14Q8TCE9 139 aa6.79□□□□□ -1.32
ATXN3-201ENST00000340660 ARHGAP5-AS1Q96IT6 56 aa6.79□□□□□ -1.32
ATXN3-201ENST00000340660 PECRQ9BY49 303 aa6.79□□□□□ -1.32
ATXN3-201ENST00000340660 LPAR5Q9H1C0 372 aa6.79□□□□□ -1.32
ATXN3-201ENST00000340660 PSORS1C1Q9UIG5 152 aa6.79□□□□□ -1.32
ATXN3-201ENST00000340660 TRAV8-3A0A0A6YYJ7 113 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 TRBV5-5A0A0J9YX44 114 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 TAAR5O14804 337 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 RBFOX2O43251 390 aaKnown RBP eCLIP6.78□□□□□ -1.32
ATXN3-201ENST00000340660 TNFSF12O43508 249 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 EDF1O60869 148 aaKnown RBP6.78□□□□□ -1.32
ATXN3-201ENST00000340660 DUSP14O95147 198 aaKnown RBP6.78□□□□□ -1.32
ATXN3-201ENST00000340660 FAM107AO95990 144 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 HPRT1P00492 218 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 CDK1P06493 297 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 HOXB6P17509 224 aaKnown RBP6.78□□□□□ -1.32
ATXN3-201ENST00000340660 QRFPP83859 136 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 KRTAP20-1Q3LI63 56 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 ZIK1Q3SY52 487 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-201ENST00000340660 CCDC28AQ8IWP9 274 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 ZNF664Q8N3J9 261 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 ZFP41Q8N8Y5 198 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 PRR26Q8N8Z3 221 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 ST6GAL2Q96JF0 529 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 KRTAP4-1Q9BYQ7 146 aa6.78□□□□□ -1.32
ATXN3-201ENST00000340660 OR2W1Q9Y3N9 320 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms